FFCP PHASE1:Hg19::chr16:75150620..75150634,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:75150620..75150634,- to FFCP PHASE1:Hg19::chr16:75150620..75150634,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=197257 | |EntrezGene=197257 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19708 | |HGNC=19708 | ||
|TSSclassifier=strong | |||
|UniProt=Q86WU2 | |UniProt=Q86WU2 | ||
|association_with_transcript=30bp_to_ENST00000300051,ENST00000450168,uc002fdm.2,uc002fdn.2_5end | |||
|cluster_id=chr16:75150620..75150634,- | |||
|coexpression_cluster_id=C1570 | |||
|description=CAGE_peak_3_at_LDHD_5end | |||
|id=chr16:75150620..75150634,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.93e-08;82!UBERON:0003104;7.10e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.39e-40!115;UBERON:0001049!4.27e-13!57;UBERON:0005068!4.27e-13!57;UBERON:0006241!4.27e-13!57;UBERON:0007135!4.27e-13!57;UBERON:0000062!2.55e-11!511;UBERON:0002616!1.59e-10!59;UBERON:0001017!2.97e-10!82;UBERON:0005743!8.52e-10!86;UBERON:0002780!1.19e-09!41;UBERON:0001890!1.19e-09!41;UBERON:0006240!1.19e-09!41;UBERON:0002020!2.51e-09!34;UBERON:0003528!2.51e-09!34;UBERON:0001893!2.51e-09!34;UBERON:0000468!2.86e-09!659;UBERON:0003080!3.36e-09!42;UBERON:0000955!4.43e-09!69;UBERON:0006238!4.43e-09!69;UBERON:0003075!8.79e-09!86;UBERON:0007284!8.79e-09!86;UBERON:0002791!9.22e-09!33;UBERON:0000073!1.17e-08!94;UBERON:0001016!1.17e-08!94;UBERON:0001869!1.92e-08!32;UBERON:0002346!8.71e-08!90;UBERON:0002619!2.22e-07!22;UBERON:0000467!2.95e-07!625;UBERON:0000922!3.05e-07!612;UBERON:0000480!3.70e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.36e-14;114!UBERON:0001893;2.24e-09;34!UBERON:0002298;7.85e-09;6!UBERON:0000073;1.01e-08;53!UBERON:0002616;1.01e-08;53!UBERON:0001950;2.80e-08;20!UBERON:0001869;2.89e-08;32!UBERON:0007100;7.77e-08;25!UBERON:0004151;1.30e-07;3!UBERON:0003978;1.60e-07;3!UBERON:0000946;1.60e-07;3!UBERON:0003528;1.79e-07;34!UBERON:0002020;1.79e-07;34!UBERON:0002791;1.92e-07;32!UBERON:0002619;2.16e-07;22!UBERON:0004732;2.46e-07;13!UBERON:0001896;4.68e-07;3!UBERON:0005290;4.68e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.64e-42,114;UBERON:0001049,9.99e-14,56;UBERON:0005068,9.99e-14,56;UBERON:0006241,9.99e-14,56;UBERON:0007135,9.99e-14,56;UBERON:0000073,2.08e-13,53;UBERON:0002616,2.08e-13,53;UBERON:0003075,9.97e-13,82;UBERON:0007284,9.97e-13,82;UBERON:0002346,8.07e-12,86;UBERON:0010314,1.04e-11,132;UBERON:0000955,2.38e-11,68;UBERON:0006238,2.38e-11,68;UBERON:0001017,1.33e-10,81;UBERON:0001893,6.16e-10,34;UBERON:0001016,7.12e-10,89;UBERON:0001869,3.06e-09,32;UBERON:0002298,4.09e-09,6;UBERON:0002780,5.18e-09,41;UBERON:0001890,5.18e-09,41;UBERON:0003080,5.18e-09,41;UBERON:0006240,5.18e-09,41;UBERON:0010371,1.23e-08,104;UBERON:0003528,1.30e-08,34;UBERON:0002020,1.30e-08,34;UBERON:0007100,1.69e-08,27;UBERON:0001950,2.96e-08,20;UBERON:0002791,6.94e-08,32;UBERON:0004151,1.09e-07,3;UBERON:0003978,1.54e-07,3;UBERON:0009751,1.54e-07,3;UBERON:0000946,1.54e-07,3;UBERON:0002523,1.54e-07,3;UBERON:0005983,1.54e-07,3;UBERON:0002165,1.54e-07,3;UBERON:0002062,1.54e-07,3;UBERON:0007280,1.54e-07,3;UBERON:0004732,1.68e-07,13;UBERON:0002619,2.27e-07,22;UBERON:0000025,2.50e-07,192;UBERON:0004111,2.94e-07,240;UBERON:0011216,3.92e-07,223;UBERON:0001896,4.83e-07,3;UBERON:0005290,4.83e-07,3;UBERON:0010096,4.83e-07,3;UBERON:0004121,5.58e-07,171;UBERON:0000924,5.58e-07,171;UBERON:0006601,5.58e-07,171 | |||
|phase1_expression=0.54503513781167,4.92431204949261,0.986680828671798,0,0.446961094427288,0,0,0.631719873426831,3.91778442299758,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0,0,0,0,0,0,0,0,0,0.200544447470142,0.651032612147555,0.223915474239924,0,0,0.145398238779565,0,0.242584061187816,0,0,0.309706370895104,0.863077176966451,0,0.236482229888585,0,0,0,0.376484679085209,0,0,0.612167784741805,0,0,0.659702600373432,0,0.426224750532694,0,0,0,0,0,0,0,0,0.316462387440884,0.633765858935825,0.425208599930087,0.209658645508376,0.44931452458598,0.600707571366025,0.32145117339416,0.855038231223746,0.79566670879636,0.547992461293902,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0.486634870302636,0,0,0,1.89919659471683,0,0,2.59637914923747,1.91542711029194,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0,0,0,0,0,0.252433774244115,0,0.161646056818812,0,0,0,0,0.272746120590835,0,1.34171076742555,1.59035721985782,0.69716365721711,0.414644220061482,0.756962552626885,1.09493207722749,0,0.643240938192885,0,0,0,0,0,0,0.220587945464788,0.217879444092406,0.237270619111097,0.134831308160164,0.588664395376038,0,0,0,0,0,29.1536580090211,5.89696330006576,11.8157981336281,0,1.35287282397425,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0.190254152234598,3.1608175918371,2.57545848628462,0,1.40402559083543,0.594524649154913,0,0.335964256397719,0.141775097242386,0,0,0,0.492663237895943,0.704387472105808,0.207328115540772,0.288239906833923,0.12624243342638,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0.285955987316295,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.18246069886334,0,0,0,0,0,0,0,0,0,0.214840489736547,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0.18532421910392,0.286249773483982,0.372158369359667,0,0,0,0,0,0,0,0.274537029736055,0,0.606547444719948,3.17020642346017,0,0,0,0,0,0.141405431953713,1.13008116620243,0,0,0,0.578775534266688,0,0,0,0,0,0.0982490410131212,0,0,0.422215270595328,0.329294892959902,0,0,0.0962221127255121,0,0,7.53150406214233,0.43050537267123,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0.851692475380653,0,0,0.223676107892416,0.166849141711909,0.390776190804081,0.278406173895242,0,0,0,0,1.68426486367398,1.46508179271894,0,0,0,0,0,0.307160702099232,0,1.54736358051564,0,0,0,0.597743964753209,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0,0,0,2.90799823828566,1.39152147242777,0,0,0.262379999988587,0,0,0,0.236387681767936,0,0,0,0,1.32656082487949,0,0.552896299656123,2.06883333267483,1.75508317723178,0,0,0.153900517007594,0,0,0.807818799687949,0,0,0,0.533034776018635,0,0,0,0.225595660617181,0,0,0.189753732724185,0,0,0,0.282706142867882,0,4.97630965539252,1.76915129006678,0,0,0,0,1.34802265961354,4.01288823649394,1.87411556580271,0,0.19566461893209,0.728341138602278,0.789168805698781,0,0,0.379119477770928,0,0,0,0.330991955875499,0,0,0.284609546029793,0.277349346026277,2.42983633669183,0.0979923974143777,0.0870592065804026,0.52418000472609,0.171986032471617,0,0.0730893170861856,0,0.484945082442097,0.176512253383001,0.677942222341597,0,0,1.58276989889697,0,0,1.06726497369676,0.19980960958213,0.288180834308212,0.114536596165916,0,0,0.49701014226173,0,0,0,0,0,0.600420288709789,0.547621515567972,0,0,0,1.39641200636127,5.27068975226872,1.43574604915363,5.99037001496973,17.1690419254628,10.0427155848843,3.49354056930977,0,0,0.472699093843342,0.741742725430498,0.404421263125109,0.0984274815147488,0,0.795229689809303,0.544813624446302,0.482259445395058,0.137539436597234,0,0,0,1.57948847310864,0,2.60058834087354,1.20645552710496,0,0.179287339332845,0,1.42939065274673,8.60719561475061,0.25426853765475,0,0.864221491201268,0,0,0,0,0,8.20692508597262,5.30027555648885,1.68067843270016,0.92562821219883,0,0,0.320362237703084,0,1.24271716604159,0.496166021811951,0,0,0,8.16026705054211,2.7575888342497,4.59518365145192,7.5410705063255,0.157054096250234,0,1.34228891392159,0.876336514945499,1.14681839138014,1.44207766997908,1.67660287941735,0.276697269872462,0,0.151649117541648,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0.889811221596536,0,0,0,0,0,0.449803112163605,0,0,0,0,0.300515217994437,0,0,0,0,0,0,0,0.686791410365586,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0.303859956177382,0.691292180758654,0,0,0.327130788511688,0,0,0,0,0.106691729694141,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,1.1561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| ||
|short_description=p3@LDHD | |||
}} | }} |
Latest revision as of 21:07, 17 September 2015
Short description: | p3@LDHD |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LDHD_5end |
Coexpression cluster: | C1570_Hepatocyte_liver_left_heart_skeletal_tongue_diaphragm |
Association with transcript: | 30bp_to_ENST00000300051, ENST00000450168, uc002fdm.2, uc002fdn.2_5end |
EntrezGene: | LDHD |
HGNC: | 19708 |
UniProt: | Q86WU2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data