FFCP PHASE1:Hg19::chr17:39661947..39661969,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:39661947..39661969,- to FFCP PHASE1:Hg19::chr17:39661947..39661969,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3860 | |EntrezGene=3860 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6415 | |HGNC=6415 | ||
|TSSclassifier=strong | |||
|UniProt=P13646,A1A4E9 | |UniProt=P13646,A1A4E9 | ||
|association_with_transcript=-82bp_to_NM_002274,NM_153490,uc002hwu.1,uc002hwv.1,uc002hwx.1,uc010cxo.2_5end | |||
|cluster_id=chr17:39661947..39661969,- | |||
|coexpression_cluster_id=C820 | |||
|description=CAGE_peak_2_at_KRT13_5end | |||
|id=chr17:39661947..39661969,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;9.57e-12;1 | |||
|ontology_enrichment_disease=DOID:1749!1.81e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:3151;4.44e-11;1!DOID:3149;4.44e-11;1!DOID:1749;6.63e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,5.43e-11,1;DOID:3149,5.43e-11,1;DOID:1749,6.84e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000161!1.37e-17!35;UBERON:0000974!5.24e-15!10;UBERON:0000166!4.78e-12!21;UBERON:0003343!3.49e-10!4;UBERON:0004785!3.49e-10!4;UBERON:0000341!4.46e-10!2;UBERON:0001004!4.71e-10!72;UBERON:0003127!5.81e-10!2;UBERON:0006562!8.40e-10!11;UBERON:0001255!3.68e-09!2;UBERON:0001556!3.68e-09!2;UBERON:0001007!5.77e-09!155;UBERON:0001555!5.77e-09!155;UBERON:0007026!5.77e-09!155;UBERON:0004119!1.02e-08!169;UBERON:0000925!1.02e-08!169;UBERON:0006595!1.02e-08!169;UBERON:0000165!1.05e-08!28;UBERON:0000930!1.05e-08!28;UBERON:0000344!1.15e-08!12;UBERON:0003729!3.12e-08!5;UBERON:0004921!2.06e-07!129;UBERON:0004185!2.06e-07!129;UBERON:0001042!2.76e-07!10;UBERON:0009145!2.76e-07!10;UBERON:0001723!4.33e-07!3;UBERON:0001033!4.33e-07!3;UBERON:0010056!4.33e-07!3;UBERON:0000162!4.84e-07!14;UBERON:0001353!4.84e-07!14;UBERON:0000163!4.84e-07!14;UBERON:0006866!4.84e-07!14;UBERON:0000164!4.84e-07!14;UBERON:0000931!4.84e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;6.37e-21;2!UBERON:0003127;1.05e-20;2!UBERON:0000974;1.43e-15;6!UBERON:0001723;1.23e-14;3!UBERON:0001033;1.23e-14;3!UBERON:0003126;2.60e-13;7!UBERON:0001005;2.60e-13;7!UBERON:0002372;1.45e-11;1!UBERON:0001961;1.45e-11;1!UBERON:0001744;1.45e-11;1!UBERON:0001042;1.45e-11;1!UBERON:0001735;1.45e-11;1!UBERON:0005795;1.78e-11;1!UBERON:0000997;4.44e-11;1!UBERON:0005056;4.44e-11;1!UBERON:0004176;4.44e-11;1!UBERON:0007196;9.57e-11;15!UBERON:0001558;9.57e-11;15!UBERON:0000002;9.26e-08;6!UBERON:0001560;9.26e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,4.70e-21,2;UBERON:0003127,8.62e-21,2;UBERON:0001723,1.23e-14,3;UBERON:0001033,1.23e-14,3;UBERON:0010056,1.23e-14,3;UBERON:0003126,2.34e-13,7;UBERON:0001005,2.34e-13,7;UBERON:0002372,1.45e-11,1;UBERON:0001961,1.45e-11,1;UBERON:0001744,1.45e-11,1;UBERON:0001735,1.45e-11,1;UBERON:0000997,4.91e-11,1;UBERON:0005056,4.91e-11,1;UBERON:0007196,8.97e-11,15;UBERON:0001558,8.97e-11,15;UBERON:0001042,8.74e-10,10;UBERON:0009145,8.74e-10,10;UBERON:0000072,9.33e-10,47;UBERON:0000974,1.32e-09,10;UBERON:0006562,6.11e-09,11;UBERON:0000065,2.12e-08,54;UBERON:0000002,9.26e-08,6;UBERON:0001560,9.26e-08,6;UBERON:0001004,1.06e-07,74;UBERON:0000166,1.32e-07,22;UBERON:0005178,3.17e-07,34;UBERON:0002224,3.17e-07,34;UBERON:0005181,5.16e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.47440361900905,23.7252397110625,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68120910214315,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,2.45040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0.690503839458535,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0,56.4666164328343,7.15637404085313,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17398771359254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37189356380129,0,0,0,0,0,0,48.9794533266518,0,1.58186518546373,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34173875039706,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,3.18518253038899,0.366857197043358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.6836962443951,1.66645102024618,0,0.248298857183432,0,0,0,11.103554142745,24.298564377055,18.7912227910699,4.59022114513129,1.66330178273007,0.0814032686109745,0,0,0,0,0.855690109280065,8.95171592294625,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,1.47440361900905,23.7252397110625,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68120910214315,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,2.45040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0.690503839458535,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0,56.4666164328343,7.15637404085313,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17398771359254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37189356380129,0,0,0,0,0,0,48.9794533266518,0,1.58186518546373,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34173875039706,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,3.18518253038899,0.366857197043358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.6836962443951,1.66645102024618,0,0.248298857183432,0,0,0,11.103554142745,24.298564377055,18.7912227910699,4.59022114513129,1.66330178273007,0.0814032686109745,0,0,0,0,0.855690109280065,8.95171592294625,0.665756774185513,0,0 | ||
|short_description=p2@KRT13 | |||
}} | }} |
Latest revision as of 05:40, 20 September 2015
Short description: | p2@KRT13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KRT13_5end |
Coexpression cluster: | C820_cervical_tongue_esophagus_throat_tonsil_oral_uterus |
Association with transcript: | -82bp_to_NM_002274, NM_153490, uc002hwu.1, uc002hwv.1, uc002hwx.1, uc010cxo.2_5end |
EntrezGene: | KRT13 |
HGNC: | 6415 |
UniProt: | P13646A1A4E9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 4.70e-21 | 2 |
open tracheal system trachea | 8.62e-21 | 2 |
tongue | 1.23e-14 | 3 |
gustatory system | 1.23e-14 | 3 |
future tongue | 1.23e-14 | 3 |
trachea | 2.34e-13 | 7 |
respiratory airway | 2.34e-13 | 7 |
tonsil | 1.45e-11 | 1 |
mucosa-associated lymphoid tissue | 1.45e-11 | 1 |
lymphoid tissue | 1.45e-11 | 1 |
tonsillar ring | 1.45e-11 | 1 |
mammalian vulva | 4.91e-11 | 1 |
external female genitalia | 4.91e-11 | 1 |
tracheobronchial tree | 8.97e-11 | 15 |
lower respiratory tract | 8.97e-11 | 15 |
chordate pharynx | 8.74e-10 | 10 |
pharyngeal region of foregut | 8.74e-10 | 10 |
segment of respiratory tract | 9.33e-10 | 47 |
neck | 1.32e-09 | 10 |
pharynx | 6.11e-09 | 11 |
respiratory tract | 2.12e-08 | 54 |
uterine cervix | 9.26e-08 | 6 |
neck of organ | 9.26e-08 | 6 |
respiratory system | 1.06e-07 | 74 |
oral opening | 1.32e-07 | 22 |
thoracic cavity element | 3.17e-07 | 34 |
thoracic cavity | 3.17e-07 | 34 |
thoracic segment organ | 5.16e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 5.43e-11 | 1 |
keratoacanthoma | 5.43e-11 | 1 |
squamous cell carcinoma | 6.84e-07 | 14 |