FFCP PHASE1:Hg19::chr17:48269193..48269251,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:48269193..48269251,- to FFCP PHASE1:Hg19::chr17:48269193..48269251,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-431bp_to_Y15916_5end | |||
|cluster_id=chr17:48269193..48269251,- | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_1_at_Y15916_5end | |||
|id=chr17:48269193..48269251,- | |||
|ontology_enrichment_celltype=CL:0000055!6.37e-42!180;CL:0000057!6.26e-25!75;CL:0000183!2.27e-17!59;CL:0000680!6.07e-17!57;CL:0000056!6.07e-17!57;CL:0000355!6.07e-17!57;CL:0000187!2.52e-16!54;CL:0000393!2.37e-14!60;CL:0000211!2.37e-14!60;CL:0000192!3.78e-13!42;CL:0000514!3.78e-13!42;CL:0000048!8.32e-12!430;CL:0000723!8.06e-11!436;CL:0000034!1.65e-10!444;CL:0000359!6.17e-09!32;CL:0000144!3.60e-08!625;CL:0000499!3.61e-08!27;CL:0002371!3.90e-08!591;CL:0002620!9.26e-08!23;CL:0000222!1.52e-07!119;CL:0002334!1.93e-07!12;CL:0000327!3.06e-07!14;CL:0002494!9.56e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000057;8.55e-11;73!CL:0000134;1.38e-10;55!CL:0000723;1.50e-10;61!CL:0000187;4.02e-10;55!CL:0002320;6.81e-10;188!CL:0000048;6.96e-10;58!CL:0000192;3.53e-09;43!CL:0002334;1.27e-08;12!CL:0000499;1.83e-08;28!CL:0002620;5.06e-08;23!CL:0000327;6.95e-08;15!CL:0000393;1.84e-07;61!CL:0000211;1.84e-07;61!CL:0000034;1.92e-07;69!CL:0000359;3.28e-07;32!CL:0002570;3.37e-07;8!CL:0002494;4.19e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.49e-29,76;CL:0000048,3.91e-20,427;CL:0000723,4.48e-19,433;CL:0000034,1.01e-17,441;CL:0000680,7.66e-17,58;CL:0000056,7.66e-17,58;CL:0000355,7.66e-17,58;CL:0000187,1.02e-16,55;CL:0000393,1.33e-13,61;CL:0000211,1.33e-13,61;CL:0000192,9.22e-13,43;CL:0000514,9.22e-13,43;CL:0002320,7.97e-11,361;CL:0000134,5.73e-09,354;CL:0002334,1.03e-08,12;CL:0000499,1.55e-08,28;CL:0000327,5.84e-08,15;CL:0002620,6.19e-08,23;CL:0000359,1.38e-07,32;CL:0002494,3.01e-07,16;CL:0002570,3.56e-07,8;CL:0000219,3.70e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000514;3.53e-09;43!CL:0000355;5.23e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.76e-19!83;UBERON:0002329!1.76e-19!83;UBERON:0003077!1.76e-19!83;UBERON:0003059!1.76e-19!83;UBERON:0007282!1.76e-19!83;UBERON:0009618!1.76e-19!83;UBERON:0007285!1.76e-19!83;UBERON:0004290!6.95e-18!70;UBERON:0001134!5.62e-17!61;UBERON:0002036!5.62e-17!61;UBERON:0003082!5.62e-17!61;UBERON:0002385!6.62e-17!63;UBERON:0001015!6.62e-17!63;UBERON:0000383!6.62e-17!63;UBERON:0000486!4.46e-14!82;UBERON:0005256!7.63e-14!143;UBERON:0002100!6.00e-10!216;UBERON:0004872!2.72e-08!84;UBERON:0001013!5.40e-08!14;UBERON:0000475!5.70e-08!365;UBERON:0000490!5.34e-07!138;UBERON:0000948!8.87e-07!24;UBERON:0005498!8.87e-07!24;UBERON:0004140!8.87e-07!24;UBERON:0009881!8.87e-07!24;UBERON:0004141!8.87e-07!24;UBERON:0003084!8.87e-07!24;UBERON:0007005!8.87e-07!24;UBERON:0004139!8.87e-07!24;UBERON:0004291!8.87e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;8.15e-10;198!UBERON:0001013;6.52e-08;14!UBERON:0002385;4.77e-07;31!UBERON:0001015;4.77e-07;31!UBERON:0000383;4.77e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.61e-17,73;UBERON:0002329,2.70e-17,71;UBERON:0003059,2.70e-17,71;UBERON:0007282,2.70e-17,71;UBERON:0004290,2.70e-17,71;UBERON:0009618,2.70e-17,71;UBERON:0001134,3.02e-17,62;UBERON:0002036,3.02e-17,62;UBERON:0003082,3.02e-17,62;UBERON:0003077,8.35e-17,72;UBERON:0007285,8.35e-17,72;UBERON:0002385,3.46e-16,64;UBERON:0001015,3.46e-16,64;UBERON:0000383,3.46e-16,64;UBERON:0007503,1.14e-15,78;UBERON:0000486,5.51e-14,83;UBERON:0005256,4.46e-12,122;UBERON:0003104,1.64e-11,160;UBERON:0009142,1.64e-11,160;UBERON:0002384,3.51e-11,371;UBERON:0002199,7.01e-08,46;UBERON:0002416,7.01e-08,46;UBERON:0001013,8.21e-08,14;UBERON:0004872,1.63e-07,83;UBERON:0000490,2.56e-07,148;UBERON:0000926,4.49e-07,315;UBERON:0004120,4.49e-07,315;UBERON:0006603,4.49e-07,315;UBERON:0002097,9.24e-07,41 | |||
|phase1_expression=9.81063248061006,10.2768251467672,15.2230756423649,11.0080628188443,21.9010936269371,18.3191090061077,32.9289841618804,0.631719873426831,1.04474251279935,0.491467873003018,0,0.873765488520689,10.8144461073666,3.09415882400117,5.63375538737457,1.34465029290355,1.80808358407193,2.92124036154949,1.95173119516203,3.44738962615006,7.95602695852587,9.09018692286455,0.572471974262113,0.684372125364421,1.88313959392204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.71911117614727,6.13740296848946,14.0961269429981,12.5334477658972,12.31195411167,4.7717156823066,23.8451086448292,0.850813354476611,3.99112915432615,4.12823492757692,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,33.2971207635863,9.3706578631789,2.78059279707759,42.7386564915732,6.73869926176878,15.1382952038423,9.60740961567345,22.2000793575444,2.17847724779836,4.84958419450877,1.9615428373615,9.08144565869588,6.33793516927999,1.87457145467037,1.24864030732128,0,1.49448680551801,0.587172493218824,0.971237666208789,1.12360645361799,1.63323337003915,1.59684612505298,1.65321249881225,23.7600571456411,33.8755693111623,16.3829045148845,17.965453545406,0.505008341862199,1.12606667884768,1.10825646193673,7.46261955497424,12.5659996277598,17.4276148331652,2.83580457900053,8.9694817844431,10.8914268297469,8.9011398487016,12.0036438433761,6.08009922506789,11.3361837620077,5.02515512095292,11.9831195891299,6.62571635096151,10.0973509697646,7.82424138459544,8.08230284094059,10.6502877754984,4.43309232201617,3.73033303083073,0,0,0,0.243947412259191,0,0.116193942869518,0.310983165046111,0.504641701751257,0,1.56449532329816,5.14592750554308,2.76269842704961,5.10804720835177,8.66255378003503,0.118306800039844,0,0,0,0,0,0,0,0,0,5.60967095213783,16.8745344645874,35.2820907325301,0,0,0.590789906681404,0,0,2.23038153388083,0,0,0,0,1.95484983186195,1.03993478527958,1.44331342025273,0.231860809950154,1.6437217193015,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0.308482478109971,0,0,2.69114602428866,4.3596006883328,1.98013371716565,4.00742318849111,7.15312891703765,13.524844040896,6.11657668145202,4.16029747645464,3.08648849114571,5.67396528093113,2.66422179016099,16.7284252580033,35.8130259558352,4.93944202068461,4.56030658011229,12.0833262572466,7.12756685640086,1.20575750823834,0.871533458600294,1.29964888536674,0,0,0,11.9812427745791,20.6751484501405,4.27910715122155,2.89562613335158,3.08214483825575,0.537182889719687,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,2.82190430954022,6.00204625271613,3.52644530809656,62.5992293207729,57.2757054038889,35.7984482127032,10.8941515943223,11.1350056899256,15.9185252839189,8.27784570340039,11.9560607736379,9.40282759562686,3.5622281931914,10.7690636604507,25.7357567858142,0,0,0,0.606255142892519,16.6435439510497,18.4458078931105,18.3599777785895,8.44040853084343,35.0825118041342,23.3213251645376,7.16390148693385,30.4013910961418,20.7785293022987,2.7757744884478,7.81271591377759,1.88892458831761,1.55776328755086,4.41599438147845,0,0.200506470303285,0,4.82220682291348,9.28664956834257,13.2435659109018,0,0,0,0,0,0,0,0.647747748306418,1.54227252690289,0.812839312631559,6.02027728625824,0,0.831076008928724,0.447749509444357,0,0,0,0.656029291399411,0.325378394664303,0.309123034943167,2.28923662045859,1.81520899825294,1.72279661398852,0,11.2478750890912,1.54673149267395,1.69453478826109,4.60511024178389,2.20538515975249,3.11518710117994,6.96080130788297,2.13066568540252,17.9844712006409,0.330569830721956,1.34533047155574,0,0.30347334256665,5.11330104227014,19.203553156669,0.6970372701606,1.23213432070436,1.59691809095107,0,2.40921484835096,0.286249773483982,0.744316738719335,2.53103539774981,13.3441135746677,5.62975140884935,4.70732886837312,2.22742273548156,3.13979456079692,3.95719406683292,11.2560182191782,8.01124335950668,0.606547444719948,4.75530963519025,3.79132610615083,7.80213982543345,3.1682753652067,2.11300293513511,5.18699663350346,13.7163268995101,14.6910551606316,7.16774946609961,1.99031692572366,0.876901770507525,9.83918408253369,8.52663177660623,1.82619339266434,3.40805847909725,3.09865162785466,3.01163839628508,5.60019533774791,2.49669736036875,1.06428319221179,9.07762831779956,8.56166721695745,0.379473173765715,4.54915136318478,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0.296964680832639,0.307160702099232,0,0,0,0,0,1.19548792950642,0.552567831062295,0,0,0,10.8863855681633,0,0,0,0.591860433821602,0,4.44547960578548,0,0,0,0,0,0.724999575434793,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,2.15460723810632,0.227884111694002,0,0.0897576444097721,0.217294743844016,0.31900115973192,5.22106282390615,0.53303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| ||
|short_description=p1@Y15916 | |||
}} | }} |
Latest revision as of 18:35, 25 July 2015
Short description: | p1@Y15916 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_Y15916_5end |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | -431bp_to_Y15916_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.49e-29 | 76 |
multi fate stem cell | 3.91e-20 | 427 |
somatic stem cell | 4.48e-19 | 433 |
stem cell | 1.01e-17 | 441 |
muscle precursor cell | 7.66e-17 | 58 |
myoblast | 7.66e-17 | 58 |
multi-potent skeletal muscle stem cell | 7.66e-17 | 58 |
muscle cell | 1.02e-16 | 55 |
electrically responsive cell | 1.33e-13 | 61 |
electrically active cell | 1.33e-13 | 61 |
smooth muscle cell | 9.22e-13 | 43 |
smooth muscle myoblast | 9.22e-13 | 43 |
connective tissue cell | 7.97e-11 | 361 |
mesenchymal cell | 5.73e-09 | 354 |
preadipocyte | 1.03e-08 | 12 |
stromal cell | 1.55e-08 | 28 |
extracellular matrix secreting cell | 5.84e-08 | 15 |
skin fibroblast | 6.19e-08 | 23 |
vascular associated smooth muscle cell | 1.38e-07 | 32 |
cardiocyte | 3.01e-07 | 16 |
mesenchymal stem cell of adipose | 3.56e-07 | 8 |
motile cell | 3.70e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 1.61e-17 | 73 |
somite | 2.70e-17 | 71 |
presomitic mesoderm | 2.70e-17 | 71 |
presumptive segmental plate | 2.70e-17 | 71 |
dermomyotome | 2.70e-17 | 71 |
trunk paraxial mesoderm | 2.70e-17 | 71 |
skeletal muscle tissue | 3.02e-17 | 62 |
striated muscle tissue | 3.02e-17 | 62 |
myotome | 3.02e-17 | 62 |
paraxial mesoderm | 8.35e-17 | 72 |
presumptive paraxial mesoderm | 8.35e-17 | 72 |
muscle tissue | 3.46e-16 | 64 |
musculature | 3.46e-16 | 64 |
musculature of body | 3.46e-16 | 64 |
epithelial vesicle | 1.14e-15 | 78 |
multilaminar epithelium | 5.51e-14 | 83 |
trunk mesenchyme | 4.46e-12 | 122 |
mesenchyme | 1.64e-11 | 160 |
entire embryonic mesenchyme | 1.64e-11 | 160 |
connective tissue | 3.51e-11 | 371 |
integument | 7.01e-08 | 46 |
integumental system | 7.01e-08 | 46 |
adipose tissue | 8.21e-08 | 14 |
splanchnic layer of lateral plate mesoderm | 1.63e-07 | 83 |
unilaminar epithelium | 2.56e-07 | 148 |
mesoderm | 4.49e-07 | 315 |
mesoderm-derived structure | 4.49e-07 | 315 |
presumptive mesoderm | 4.49e-07 | 315 |
skin of body | 9.24e-07 | 41 |