FFCP PHASE1:Hg19::chr18:19192235..19192337,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:19192235..19192337,+ to FFCP PHASE1:Hg19::chr18:19192235..19192337,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6632 | |EntrezGene=6632 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11158 | |HGNC=11158 | ||
|TSSclassifier=strong | |||
|UniProt=P62314 | |UniProt=P62314 | ||
|association_with_transcript=0bp_to_ENST00000300413,NM_006938,uc002ktj.1_5end | |||
|cluster_id=chr18:19192235..19192337,+ | |||
|coexpression_cluster_id=C896 | |||
|description=CAGE_peak_1_at_SNRPD1_5end | |||
|id=chr18:19192235..19192337,+ | |||
|ontology_enrichment_celltype=CL:0000012!2.82e-20!682;CL:0000548!3.72e-19!679;CL:0000004!3.72e-19!679;CL:0000255!3.72e-19!679;CL:0000003!6.74e-16!722;CL:0000066!5.47e-13!254;CL:0000063!2.60e-10!578 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.09e-13,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!6.59e-60!239;DOID:162!7.13e-60!235;DOID:0050686!6.96e-33!137;DOID:0050687!1.91e-29!143;DOID:2531!9.65e-25!51;DOID:0060083!9.65e-25!51;DOID:305!8.72e-24!106;DOID:1240!6.53e-21!39;DOID:8692!9.29e-17!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.77e-16;39!DOID:8692;2.83e-16;31!DOID:2531;1.94e-15;51!DOID:0060083;1.94e-15;51!DOID:0050686;2.79e-08;137!DOID:305;1.50e-07;106!DOID:0050687;2.85e-07;143!DOID:162;3.25e-07;235!DOID:14566;4.75e-07;239 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,6.59e-60,239;DOID:162,7.13e-60,235;DOID:0050686,6.96e-33,137;DOID:0050687,1.91e-29,143;DOID:2531,9.65e-25,51;DOID:0060083,9.65e-25,51;DOID:305,8.72e-24,106;DOID:1240,6.53e-21,39;DOID:8692,9.29e-17,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@SNRPD1 | |||
}} | }} |
Latest revision as of 22:14, 18 September 2015
Short description: | p1@SNRPD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNRPD1_5end |
Coexpression cluster: | C896_retinoblastoma_iPS_acute_lymphoma_chronic_Burkitt_testicular |
Association with transcript: | 0bp_to_ENST00000300413, NM_006938, uc002ktj.1_5end |
EntrezGene: | SNRPD1 |
HGNC: | 11158 |
UniProt: | P62314 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.09e-13 | 253 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 6.59e-60 | 239 |
cancer | 7.13e-60 | 235 |
organ system cancer | 6.96e-33 | 137 |
cell type cancer | 1.91e-29 | 143 |
hematologic cancer | 9.65e-25 | 51 |
immune system cancer | 9.65e-25 | 51 |
carcinoma | 8.72e-24 | 106 |
leukemia | 6.53e-21 | 39 |
myeloid leukemia | 9.29e-17 | 31 |