FFCP PHASE1:Hg19::chr18:34273079..34273092,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:34273079..34273092,+ to FFCP PHASE1:Hg19::chr18:34273079..34273092,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80206 | |EntrezGene=80206 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26178 | |HGNC=26178 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=140bp_to_uc010dna.1_5end | |||
|cluster_id=chr18:34273079..34273092,+ | |||
|description=CAGE_peak_5_at_FHOD3_5end | |||
|id=chr18:34273079..34273092,+ | |||
|ontology_enrichment_celltype=CL:0002620!2.71e-18!23;CL:0000057!5.60e-14!75;CL:0002556!5.54e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002574;1.14e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002574,1.87e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.29e-09;3!UBERON:0003057;1.29e-09;3!UBERON:0005754;2.99e-08;1!UBERON:0008801;1.14e-07;1 | |||
|ontology_enrichment_disease=DOID:17!1.61e-07!5;DOID:450!1.61e-07!5;DOID:66!1.61e-07!5;DOID:423!1.61e-07!5;DOID:0080000!1.61e-07!5;DOID:11722!1.61e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:6193;1.14e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,1.26e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.39e-34!115;UBERON:0001049!1.02e-18!57;UBERON:0005068!1.02e-18!57;UBERON:0006241!1.02e-18!57;UBERON:0007135!1.02e-18!57;UBERON:0003102!5.66e-16!95;UBERON:0002616!1.24e-13!59;UBERON:0000475!2.47e-13!365;UBERON:0000153!4.55e-13!129;UBERON:0007811!4.55e-13!129;UBERON:0000033!9.47e-13!123;UBERON:0001017!3.03e-12!82;UBERON:0002346!4.18e-12!90;UBERON:0000073!4.68e-12!94;UBERON:0001016!4.68e-12!94;UBERON:0005743!5.38e-12!86;UBERON:0000955!5.69e-12!69;UBERON:0006238!5.69e-12!69;UBERON:0000924!6.42e-12!173;UBERON:0006601!6.42e-12!173;UBERON:0003080!1.34e-11!42;UBERON:0002097!1.98e-11!40;UBERON:0002199!2.16e-11!45;UBERON:0002416!2.16e-11!45;UBERON:0003075!2.52e-11!86;UBERON:0007284!2.52e-11!86;UBERON:0004121!3.32e-11!169;UBERON:0002780!9.17e-11!41;UBERON:0001890!9.17e-11!41;UBERON:0006240!9.17e-11!41;UBERON:0002298!1.80e-09!8;UBERON:0003076!6.47e-09!15;UBERON:0003057!6.47e-09!15;UBERON:0002020!2.14e-08!34;UBERON:0003528!2.14e-08!34;UBERON:0001893!5.15e-08!34;UBERON:0001758!5.54e-08!6;UBERON:0003672!5.54e-08!6;UBERON:0000062!5.68e-08!511;UBERON:0001869!1.39e-07!32;UBERON:0002791!1.81e-07!33;UBERON:0000165!7.78e-07!28;UBERON:0000930!7.78e-07!28;UBERON:0003056!9.09e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;7.67e-27;6!UBERON:0000988;2.28e-20;3!UBERON:0002148;5.61e-14;2!UBERON:0006331;5.61e-14;2!UBERON:0009662;5.61e-14;2!UBERON:0004733;2.35e-13;12!UBERON:0002028;2.35e-13;12!UBERON:0004732;2.59e-12;13!UBERON:0006947;3.43e-10;3!UBERON:0004054;3.43e-10;3!UBERON:0002240;1.29e-09;3!UBERON:0005174;1.29e-09;3!UBERON:0001137;1.29e-09;3!UBERON:0001896;2.11e-09;3!UBERON:0005290;2.11e-09;3!UBERON:0001000;2.70e-08;1!UBERON:0005352;2.70e-08;1!UBERON:0000998;2.99e-08;1!UBERON:0006868;2.99e-08;1!UBERON:0005904;7.58e-08;4!UBERON:0007029;1.14e-07;1!UBERON:0001831;1.14e-07;1!UBERON:0001567;1.14e-07;1!UBERON:0002680;4.05e-07;9!UBERON:0001895;4.05e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,4.02e-27,6;UBERON:0003076,1.88e-20,15;UBERON:0003057,1.88e-20,15;UBERON:0000988,2.00e-20,3;UBERON:0002148,4.77e-14,2;UBERON:0006331,4.77e-14,2;UBERON:0009662,4.77e-14,2;UBERON:0004733,1.72e-13,12;UBERON:0002028,1.72e-13,12;UBERON:0007277,1.72e-13,12;UBERON:0004732,1.94e-12,13;UBERON:0006947,3.36e-10,3;UBERON:0004054,3.36e-10,3;UBERON:0007023,5.84e-10,114;UBERON:0001896,1.38e-09,3;UBERON:0005290,1.38e-09,3;UBERON:0010096,1.38e-09,3;UBERON:0002240,1.44e-09,3;UBERON:0005174,1.44e-09,3;UBERON:0001137,1.44e-09,3;UBERON:0001000,2.70e-08,1;UBERON:0005352,2.70e-08,1;UBERON:0000998,2.89e-08,1;UBERON:0006868,2.89e-08,1;UBERON:0001831,6.97e-08,1;UBERON:0001567,6.97e-08,1;UBERON:0008801,6.97e-08,1;UBERON:0007029,7.45e-08,1;UBERON:0005904,7.47e-08,4;UBERON:0001049,8.62e-08,56;UBERON:0005068,8.62e-08,56;UBERON:0006241,8.62e-08,56;UBERON:0007135,8.62e-08,56;UBERON:0002680,3.89e-07,9;UBERON:0001895,3.89e-07,9;UBERON:0010092,3.89e-07,9 | |||
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| ||
|short_description=p5@FHOD3 | |||
}} | }} |
Latest revision as of 09:37, 19 September 2015
Short description: | p5@FHOD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FHOD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 140bp_to_uc010dna.1_5end |
EntrezGene: | FHOD3 |
HGNC: | 26178 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stromal cell of pancreas | 1.87e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
brainstem | 4.02e-27 | 6 |
posterior neural tube | 1.88e-20 | 15 |
chordal neural plate | 1.88e-20 | 15 |
pons | 2.00e-20 | 3 |
locus ceruleus | 4.77e-14 | 2 |
brainstem nucleus | 4.77e-14 | 2 |
hindbrain nucleus | 4.77e-14 | 2 |
segmental subdivision of hindbrain | 1.72e-13 | 12 |
hindbrain | 1.72e-13 | 12 |
presumptive hindbrain | 1.72e-13 | 12 |
segmental subdivision of nervous system | 1.94e-12 | 13 |
male genital duct | 3.36e-10 | 3 |
internal male genitalia | 3.36e-10 | 3 |
adult organism | 5.84e-10 | 114 |
medulla oblongata | 1.38e-09 | 3 |
myelencephalon | 1.38e-09 | 3 |
future myelencephalon | 1.38e-09 | 3 |
spinal cord | 1.44e-09 | 3 |
dorsal region element | 1.44e-09 | 3 |
dorsum | 1.44e-09 | 3 |
vas deferens | 2.70e-08 | 1 |
spermatic cord | 2.70e-08 | 1 |
seminal vesicle | 2.89e-08 | 1 |
seminal fluid secreting gland | 2.89e-08 | 1 |
parotid gland | 6.97e-08 | 1 |
cheek | 6.97e-08 | 1 |
parotid gland primordium | 6.97e-08 | 1 |
surface | 7.45e-08 | 1 |
duct of male reproductive system | 7.47e-08 | 4 |
neural tube | 8.62e-08 | 56 |
neural rod | 8.62e-08 | 56 |
future spinal cord | 8.62e-08 | 56 |
neural keel | 8.62e-08 | 56 |
regional part of metencephalon | 3.89e-07 | 9 |
metencephalon | 3.89e-07 | 9 |
future metencephalon | 3.89e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.26e-07 | 1 |