FFCP PHASE1:Hg19::chr19:36909528..36909581,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:36909528..36909581,- to FFCP PHASE1:Hg19::chr19:36909528..36909581,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=284406 | |EntrezGene=284406 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28682 | |HGNC=28682 | ||
|TSSclassifier=strong | |||
|UniProt=F5H4L8,D3Y299,Q8N141 | |UniProt=F5H4L8,D3Y299,Q8N141 | ||
|association_with_transcript=0bp_to_ENST00000392161,ENST00000392171,NM_133466,uc002ody.1_5end | |||
|cluster_id=chr19:36909528..36909581,- | |||
|description=CAGE_peak_1_at_ZFP82_5end | |||
|id=chr19:36909528..36909581,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.68e-22!94;UBERON:0001016!2.68e-22!94;UBERON:0001017!2.95e-21!82;UBERON:0005743!1.36e-20!86;UBERON:0001049!1.98e-18!57;UBERON:0005068!1.98e-18!57;UBERON:0006241!1.98e-18!57;UBERON:0007135!1.98e-18!57;UBERON:0002616!1.00e-16!59;UBERON:0000955!2.00e-16!69;UBERON:0006238!2.00e-16!69;UBERON:0003080!5.04e-16!42;UBERON:0002346!6.55e-16!90;UBERON:0002780!7.51e-16!41;UBERON:0001890!7.51e-16!41;UBERON:0006240!7.51e-16!41;UBERON:0003075!3.38e-15!86;UBERON:0007284!3.38e-15!86;UBERON:0000924!1.37e-13!173;UBERON:0006601!1.37e-13!173;UBERON:0007023!1.73e-13!115;UBERON:0001893!2.63e-13!34;UBERON:0002020!5.17e-13!34;UBERON:0003528!5.17e-13!34;UBERON:0004121!6.45e-13!169;UBERON:0002791!7.22e-13!33;UBERON:0001869!1.10e-12!32;UBERON:0003056!3.09e-12!61;UBERON:0000956!3.60e-11!25;UBERON:0000203!3.60e-11!25;UBERON:0002619!1.43e-10!22;UBERON:0000153!2.19e-10!129;UBERON:0007811!2.19e-10!129;UBERON:0000033!3.86e-10!123;UBERON:0001950!9.48e-10!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.61e-12;41!UBERON:0001890;7.61e-12;41!UBERON:0001869;1.45e-11;32!UBERON:0002791;1.50e-11;32!UBERON:0001893;3.46e-11;34!UBERON:0000956;4.03e-11;25!UBERON:0000203;4.03e-11;25!UBERON:0003528;4.47e-11;34!UBERON:0002020;4.47e-11;34!UBERON:0000073;1.70e-10;53!UBERON:0002616;1.70e-10;53!UBERON:0002619;1.80e-10;22!UBERON:0001950;1.08e-09;20!UBERON:0001016;2.56e-08;83!UBERON:0000955;5.57e-08;68!UBERON:0001017;9.04e-08;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.09e-23,89;UBERON:0001017,3.41e-21,81;UBERON:0001049,2.76e-18,56;UBERON:0005068,2.76e-18,56;UBERON:0006241,2.76e-18,56;UBERON:0007135,2.76e-18,56;UBERON:0000073,2.39e-17,53;UBERON:0002616,2.39e-17,53;UBERON:0000955,2.38e-16,68;UBERON:0006238,2.38e-16,68;UBERON:0002780,6.87e-16,41;UBERON:0001890,6.87e-16,41;UBERON:0003080,6.87e-16,41;UBERON:0006240,6.87e-16,41;UBERON:0002346,1.75e-15,86;UBERON:0003075,8.96e-15,82;UBERON:0007284,8.96e-15,82;UBERON:0004121,1.66e-13,171;UBERON:0000924,1.66e-13,171;UBERON:0006601,1.66e-13,171;UBERON:0001893,2.44e-13,34;UBERON:0007023,3.02e-13,114;UBERON:0003528,4.81e-13,34;UBERON:0002020,4.81e-13,34;UBERON:0002791,9.87e-13,32;UBERON:0001869,1.03e-12,32;UBERON:0003056,1.84e-12,61;UBERON:0010314,2.91e-12,132;UBERON:0000956,3.38e-11,25;UBERON:0000203,3.38e-11,25;UBERON:0010371,6.15e-11,104;UBERON:0002619,1.35e-10,22;UBERON:0001950,9.00e-10,20 | |||
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| ||
|short_description=p1@ZFP82 | |||
}} | }} |
Latest revision as of 16:36, 17 September 2015
Short description: | p1@ZFP82 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZFP82_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000392161, ENST00000392171, NM_133466, uc002ody.1_5end |
EntrezGene: | ZFP82 |
HGNC: | 28682 |
UniProt: | F5H4L8D3Y299Q8N141 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 7.09e-23 | 89 |
central nervous system | 3.41e-21 | 81 |
neural tube | 2.76e-18 | 56 |
neural rod | 2.76e-18 | 56 |
future spinal cord | 2.76e-18 | 56 |
neural keel | 2.76e-18 | 56 |
regional part of nervous system | 2.39e-17 | 53 |
regional part of brain | 2.39e-17 | 53 |
brain | 2.38e-16 | 68 |
future brain | 2.38e-16 | 68 |
regional part of forebrain | 6.87e-16 | 41 |
forebrain | 6.87e-16 | 41 |
anterior neural tube | 6.87e-16 | 41 |
future forebrain | 6.87e-16 | 41 |
neurectoderm | 1.75e-15 | 86 |
neural plate | 8.96e-15 | 82 |
presumptive neural plate | 8.96e-15 | 82 |
ectoderm-derived structure | 1.66e-13 | 171 |
ectoderm | 1.66e-13 | 171 |
presumptive ectoderm | 1.66e-13 | 171 |
telencephalon | 2.44e-13 | 34 |
adult organism | 3.02e-13 | 114 |
brain grey matter | 4.81e-13 | 34 |
gray matter | 4.81e-13 | 34 |
regional part of telencephalon | 9.87e-13 | 32 |
cerebral hemisphere | 1.03e-12 | 32 |
pre-chordal neural plate | 1.84e-12 | 61 |
structure with developmental contribution from neural crest | 2.91e-12 | 132 |
cerebral cortex | 3.38e-11 | 25 |
pallium | 3.38e-11 | 25 |
ecto-epithelium | 6.15e-11 | 104 |
regional part of cerebral cortex | 1.35e-10 | 22 |
neocortex | 9.00e-10 | 20 |