FFCP PHASE1:Hg19::chr19:38423290..38423301,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23094 | |EntrezGene=23094 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23801 | |HGNC=23801 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=306bp_to_ENST00000476317_5end | |||
|cluster_id=chr19:38423290..38423301,+ | |||
|coexpression_cluster_id=C3782 | |||
|description=CAGE_peak_10_at_SIPA1L3_5end | |||
|id=chr19:38423290..38423301,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.17e-10!254;CL:0002076!6.10e-08!43;CL:0000223!3.81e-07!59;CL:0000239!7.02e-07!3;CL:1000615!7.02e-07!3;CL:0002306!7.02e-07!3;CL:0000082!8.45e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0001014;5.41e-07;2!CL:0001016;5.41e-07;2!CL:0002097;8.52e-07;2!CL:1000415;8.52e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,5.73e-07,2;CL:0001016,5.73e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!6.84e-19!106;DOID:299!4.74e-15!25;DOID:0050687!3.59e-11!143;DOID:0050615!1.63e-08!16;DOID:162!1.60e-07!235;DOID:1324!3.83e-07!15;DOID:14566!3.95e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:299;2.15e-07;25!DOID:4929;4.69e-07;2!DOID:3910;8.52e-07;2!DOID:3493;8.52e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.73e-09,106;DOID:299,2.10e-07,25;DOID:4929,4.56e-07,2;DOID:3493,7.20e-07,2;DOID:3910,9.02e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001007!3.51e-18!155;UBERON:0001555!3.51e-18!155;UBERON:0007026!3.51e-18!155;UBERON:0004119!2.12e-16!169;UBERON:0000925!2.12e-16!169;UBERON:0006595!2.12e-16!169;UBERON:0004921!1.43e-14!129;UBERON:0004185!1.43e-14!129;UBERON:0000466!5.42e-14!126;UBERON:0000464!2.24e-13!104;UBERON:0005911!2.32e-13!82;UBERON:0005177!7.54e-13!107;UBERON:0009569!5.72e-12!113;UBERON:0001004!5.95e-11!72;UBERON:0002294!7.69e-11!7;UBERON:0001173!7.69e-11!7;UBERON:0004912!7.69e-11!7;UBERON:0002048!1.62e-10!22;UBERON:0000117!1.62e-10!22;UBERON:0000171!1.62e-10!22;UBERON:0000170!1.62e-10!22;UBERON:0005597!1.62e-10!22;UBERON:0000118!1.62e-10!22;UBERON:0000077!1.70e-10!130;UBERON:0005153!1.18e-09!37;UBERON:0005178!1.28e-09!34;UBERON:0002224!1.28e-09!34;UBERON:0005181!3.08e-09!35;UBERON:0000915!3.98e-09!52;UBERON:0000058!6.08e-09!26;UBERON:0001041!6.33e-09!98;UBERON:0000160!2.10e-08!27;UBERON:0008947!3.25e-08!38;UBERON:0003258!3.25e-08!38;UBERON:0000065!3.55e-08!53;UBERON:0004807!3.28e-07!28;UBERON:0005409!4.49e-07!35;UBERON:0005157!5.82e-07!51;UBERON:0002110!6.75e-07!3;UBERON:0006242!6.75e-07!3;UBERON:0006853!7.02e-07!3;UBERON:0007685!7.02e-07!3;UBERON:0004134!7.02e-07!3;UBERON:0004802!8.45e-07!19;UBERON:0000115!8.45e-07!19;UBERON:0000344!8.55e-07!12;UBERON:0003104!8.67e-07!238;UBERON:0009142!8.67e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.20e-35;4!UBERON:0002114;6.02e-16;2!UBERON:0000160;1.88e-15;17!UBERON:0002294;6.24e-15;7!UBERON:0001173;6.24e-15;7!UBERON:0004913;7.43e-13;1!UBERON:0003703;7.43e-13;1!UBERON:0001174;7.43e-13;1!UBERON:0004914;7.43e-13;1!UBERON:0002394;3.36e-12;4!UBERON:0003928;3.36e-12;4!UBERON:0005409;4.42e-12;22!UBERON:0000058;1.26e-10;10!UBERON:0004921;9.37e-10;33!UBERON:0001851;3.73e-07;15!UBERON:0006562;8.52e-07;2!UBERON:0004903;8.52e-07;2!UBERON:0002173;8.52e-07;2!UBERON:0002186;8.52e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,4.30e-36,4;UBERON:0002114,5.38e-16,2;UBERON:0000160,1.35e-15,17;UBERON:0004913,7.03e-13,1;UBERON:0003703,7.03e-13,1;UBERON:0001174,7.03e-13,1;UBERON:0004914,7.03e-13,1;UBERON:0002294,1.09e-11,9;UBERON:0001173,1.09e-11,9;UBERON:0004912,1.09e-11,9;UBERON:0005409,8.94e-11,25;UBERON:0000058,1.46e-09,19;UBERON:0002394,1.94e-08,6;UBERON:0003928,1.94e-08,6;UBERON:0001851,4.34e-07,15;UBERON:0004903,9.02e-07,2;UBERON:0002173,9.02e-07,2;UBERON:0002186,9.02e-07,2 | |||
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| ||
|short_description=p10@SIPA1L3 | |||
}} | }} |
Latest revision as of 18:40, 17 September 2015
Short description: | p10@SIPA1L3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SIPA1L3_5end |
Coexpression cluster: | C3782_small_papillotubular_smallcell_Intestinal_immature_bile_colon |
Association with transcript: | 306bp_to_ENST00000476317_5end |
EntrezGene: | SIPA1L3 |
HGNC: | 23801 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 5.73e-07 | 2 |
immature CD1a-positive Langerhans cell | 5.73e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
small intestine | 4.30e-36 | 4 |
duodenum | 5.38e-16 | 2 |
intestine | 1.35e-15 | 17 |
hepatopancreatic ampulla | 7.03e-13 | 1 |
extrahepatic bile duct | 7.03e-13 | 1 |
common bile duct | 7.03e-13 | 1 |
duodenal papilla | 7.03e-13 | 1 |
biliary system | 1.09e-11 | 9 |
biliary tree | 1.09e-11 | 9 |
biliary bud | 1.09e-11 | 9 |
gastrointestinal system | 8.94e-11 | 25 |
duct | 1.46e-09 | 19 |
bile duct | 1.94e-08 | 6 |
digestive system duct | 1.94e-08 | 6 |
cortex | 4.34e-07 | 15 |
bronchoalveolar duct junction | 9.02e-07 | 2 |
alveolar duct | 9.02e-07 | 2 |
bronchiole | 9.02e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.73e-09 | 106 |
adenocarcinoma | 2.10e-07 | 25 |
tubular adenocarcinoma | 4.56e-07 | 2 |
signet ring cell adenocarcinoma | 7.20e-07 | 2 |
lung adenocarcinoma | 9.02e-07 | 2 |