FFCP PHASE1:Hg19::chr19:39893552..39893566,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr19:39893552..39893566,+ to FFCP PHASE1:Hg19::chr19:39893552..39893566,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:39893552..39893566,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr19:39893552..39893566,+ | |||
|id=chr19:39893552..39893566,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.29e-33!42;CL:0000860!4.14e-31!45;CL:0000766!1.61e-21!76;CL:0002194!4.37e-20!63;CL:0000576!4.37e-20!63;CL:0000040!4.37e-20!63;CL:0000559!4.37e-20!63;CL:0000839!5.57e-20!70;CL:0000557!1.86e-19!71;CL:0002009!5.72e-19!65;CL:0000763!1.77e-16!112;CL:0000049!1.77e-16!112;CL:0000037!9.07e-12!172;CL:0000566!9.07e-12!172;CL:0000738!1.29e-11!140;CL:0002087!2.08e-10!119;CL:0000988!2.17e-10!182;CL:0002032!3.55e-10!165;CL:0000837!3.55e-10!165;CL:0002031!4.75e-10!124;CL:0002393!5.64e-07!9;CL:0002397!5.64e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.26e-45;33!CL:0002057;1.26e-45;33!CL:0000473;1.97e-36;39!CL:0000234;1.97e-36;39!CL:0000576;1.10e-31;48!CL:0000766;4.75e-22;69!CL:0000875;8.81e-17;3!CL:0002396;8.81e-17;3!CL:0000763;1.23e-09;100!CL:0002087;1.14e-08;104!CL:0000775;2.46e-08;3!CL:0000738;9.83e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.32e-60,42;CL:0002057,5.32e-60,42;CL:0000473,6.50e-52,48;CL:0000234,6.50e-52,48;CL:0002194,1.38e-40,59;CL:0000576,1.38e-40,59;CL:0000040,1.38e-40,59;CL:0000559,1.38e-40,59;CL:0002009,3.99e-39,61;CL:0000766,4.04e-39,72;CL:0000839,7.48e-36,66;CL:0000557,2.96e-35,67;CL:0000763,1.62e-24,108;CL:0000049,1.62e-24,108;CL:0002087,1.12e-22,115;CL:0000738,3.92e-22,136;CL:0002031,1.35e-19,120;CL:0000875,4.42e-17,3;CL:0002396,4.42e-17,3;CL:0000037,6.48e-17,168;CL:0002032,2.52e-16,161;CL:0000837,2.52e-16,161;CL:0000988,8.74e-16,177;CL:0002393,7.78e-10,9;CL:0002397,7.78e-10,9;CL:0000775,3.37e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;7.87e-48;42!CL:0000049;3.42e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.80e-20!102;UBERON:0003061!1.80e-20!102;UBERON:0002193!3.41e-18!112;UBERON:0002371!1.92e-16!80;UBERON:0001474!9.38e-16!86;UBERON:0004765!2.51e-12!101;UBERON:0001434!2.51e-12!101;UBERON:0002405!3.39e-10!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.74e-18;15!UBERON:0000179;8.74e-18;15!UBERON:0000463;8.74e-18;15!UBERON:0002390;5.20e-08;32!UBERON:0000996;5.06e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.74e-42,98;UBERON:0003061,3.74e-42,98;UBERON:0002193,9.31e-38,108;UBERON:0002371,1.40e-30,76;UBERON:0001474,5.00e-28,82;UBERON:0004765,3.81e-25,90;UBERON:0002405,3.43e-24,93;UBERON:0001434,3.47e-22,100;UBERON:0000178,8.99e-18,15;UBERON:0000179,8.99e-18,15;UBERON:0000463,8.99e-18,15;UBERON:0003081,1.87e-17,203;UBERON:0002204,1.85e-11,167;UBERON:0000926,4.00e-10,315;UBERON:0004120,4.00e-10,315;UBERON:0006603,4.00e-10,315;UBERON:0000996,4.78e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.37129905888014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157421562627358,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0.880801318004542,0,0.601633342410425,0.651032612147555,0.223915474239924,0,0,0.872389432677388,0.377875943688809,0,1.62700325833979,0.411167888021826,2.47765096716083,7.19230980805376,7.68482119587302,2.83778675866302,3.10271112662957,3.87290810150296,2.70852973188684,1.31769637679823,0.818718450173537,0.898893937780338,0.918251677112708,0.962787081228281,2.55734850319616,1.64925650093358,2.59302754908121,1.27867425159808,1.16083695451434,0,0.622822248995575,10.3011952755265,7.30076085788282,6.5156653411535,0.605399502633369,1.84138817993782,0.949387162322653,1.05627643155971,0.425208599930087,0.209658645508376,0.561643155732475,0.750884464207532,0.16072558669708,1.71007646244749,1.9891667719909,1.46131323011707,0,0,0.889509253863555,0.426730222566507,0.400395987036012,0,1.32208974556972,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0.32592226663359,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0.515281080091258,0,0,0,0.252433774244115,0,0,0,0.10075209822764,0,0,0,0,0.365921118388786,0.397589304964456,0.464775771478074,0.621966330092223,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0.576479813667846,0.75745460055828,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.385029108839245,0,0,0,0,0,2.24702107184155,0,1.24324654030811,0.24538298343828,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,1.07857100409308,0.213455115606889,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0.211107635297664,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,4.56702848308952,3.0585488285695,2.84823593587081,0.714695326373367,0.411362273086194,3.8908398671563,4.32025149790492,1.58625035258854,0,0,0,0,0,0,0,0,0,0.211673582723883,0.324621940274555,0,0.456469358066384,0,0,0,0.1605880751037,0.201799707191048,0.425846237690326,0,0,0.223676107892416,0,0,0.278406173895242,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0.614321404198464,0,0,0,0,0,0,0,0.503865495708552,0.102268682502155,0,0,0,0.358042349351218,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.591095237907095,0,0,0,0.153900517007594,0.113942055847001,0,0,0.217294743844016,0.957003479195758,0.0915975934018623,0.533034776018635,0,0.31396051279005,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0.19566461893209,0,0.394584402849391,0,0,0.063186579628488,1.9542044523884,0,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0.174118413160805,0,0.171986032471617,0,0,0.0821154570532092,0,0.0882561266915003,0,0,0,0.126621591911757,0.391102765469606,0,0.213452994739353,0,0.144090417154106,0,0.686379991447858,0.288109595976299,0,0,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0.964518890790115,0.687697182986169,0.83088067605837,0,0,0.0607495566580247,0,0,0.0524545881349981,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,2.39460383124975,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0.314408610199332,0,0,0.197611631897944,0,0,0.544017803369474,0,0.306345576763462,0.655745261419609,0,0,0.122026264901963,0,0.573409195690071,0.110929051536852,0.0620964029413835,0.276697269872462,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0.228840068396924,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320075189082423,0,0,0.184105950251841,0.139879507719444,0,0,0,0.471797825567689,0.218419276384028,0,0.850299680406731,0.247871528518004,0,0.318004350653419,0.0788617450012534,0.80057074828547,0.705351887381368,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0.20170506870352,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0.175871244359621,0,0,0,0,0.227662191351298,0.177404740325278,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0.9555033757741,0.0714765441766563,0,0.116241425368125,0.173858272302579,0,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| ||
|short_description=p@chr19:39893552..39893566,+ | |||
}} | }} |
Latest revision as of 07:35, 26 July 2015
Short description: | p@chr19:39893552..39893566, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:39893552..39893566, + |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.32e-60 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.32e-60 | 42 |
defensive cell | 6.50e-52 | 48 |
phagocyte | 6.50e-52 | 48 |
monopoietic cell | 1.38e-40 | 59 |
monocyte | 1.38e-40 | 59 |
monoblast | 1.38e-40 | 59 |
promonocyte | 1.38e-40 | 59 |
macrophage dendritic cell progenitor | 3.99e-39 | 61 |
myeloid leukocyte | 4.04e-39 | 72 |
myeloid lineage restricted progenitor cell | 7.48e-36 | 66 |
granulocyte monocyte progenitor cell | 2.96e-35 | 67 |
myeloid cell | 1.62e-24 | 108 |
common myeloid progenitor | 1.62e-24 | 108 |
nongranular leukocyte | 1.12e-22 | 115 |
leukocyte | 3.92e-22 | 136 |
hematopoietic lineage restricted progenitor cell | 1.35e-19 | 120 |
non-classical monocyte | 4.42e-17 | 3 |
CD14-low, CD16-positive monocyte | 4.42e-17 | 3 |
hematopoietic stem cell | 6.48e-17 | 168 |
hematopoietic oligopotent progenitor cell | 2.52e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.52e-16 | 161 |
hematopoietic cell | 8.74e-16 | 177 |
intermediate monocyte | 7.78e-10 | 9 |
CD14-positive, CD16-positive monocyte | 7.78e-10 | 9 |
neutrophil | 3.37e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.74e-42 | 98 |
blood island | 3.74e-42 | 98 |
hemolymphoid system | 9.31e-38 | 108 |
bone marrow | 1.40e-30 | 76 |
bone element | 5.00e-28 | 82 |
skeletal element | 3.81e-25 | 90 |
immune system | 3.43e-24 | 93 |
skeletal system | 3.47e-22 | 100 |
blood | 8.99e-18 | 15 |
haemolymphatic fluid | 8.99e-18 | 15 |
organism substance | 8.99e-18 | 15 |
lateral plate mesoderm | 1.87e-17 | 203 |
musculoskeletal system | 1.85e-11 | 167 |
mesoderm | 4.00e-10 | 315 |
mesoderm-derived structure | 4.00e-10 | 315 |
presumptive mesoderm | 4.00e-10 | 315 |
vagina | 4.78e-07 | 1 |