FFCP PHASE1:Hg19::chr19:51520513..51520535,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:51520513..51520535,- | |||
|description=CAGE_peak_at_chr19:51520513..51520535,- | |||
|id=chr19:51520513..51520535,- | |||
|ontology_enrichment_celltype=CL:0000066!3.82e-14!254;CL:0000076!7.61e-14!62;CL:0002159!1.82e-11!13;CL:0002077!1.76e-08!33;CL:0002076!4.40e-08!43;CL:0002251!5.88e-08!21;CL:0000240!7.98e-07!6;CL:0000311!7.98e-07!6;CL:0000079!7.98e-07!6;CL:0000237!7.98e-07!6;CL:0000036!7.98e-07!6;CL:0000357!7.98e-07!6;CL:0000114!7.98e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000575;6.82e-23;2!CL:0002159;8.38e-13;14!CL:0000317;8.52e-07;2!CL:1000448;8.52e-07;2!CL:0002308;8.52e-07;2!CL:0002140;8.52e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,7.65e-23,2;CL:0000076,4.78e-13,63;CL:0002159,9.50e-13,14;CL:0000317,8.52e-07,2;CL:1000448,8.52e-07,2;CL:0002308,8.52e-07,2;CL:0002140,8.52e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008814;2.35e-23;2!UBERON:0010056;2.35e-23;2!UBERON:0009143;2.46e-12;1!UBERON:0006242;2.46e-12;1 | |||
|ontology_enrichment_disease=DOID:1749!2.63e-13!14;DOID:305!3.68e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:1749;7.88e-20;14!DOID:3151;2.46e-12;1!DOID:3149;2.46e-12;1!DOID:4929;5.57e-07;2!DOID:3451;8.52e-07;2!DOID:4159;8.52e-07;2!DOID:0060122;8.52e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,9.43e-20,14;DOID:3151,4.81e-12,1;DOID:3149,4.81e-12,1;DOID:4929,5.73e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0003729!4.35e-12!5;UBERON:0003343!2.54e-10!4;UBERON:0004785!2.54e-10!4;UBERON:0002294!2.35e-09!7;UBERON:0001173!2.35e-09!7;UBERON:0004912!2.35e-09!7;UBERON:0001723!5.10e-09!3;UBERON:0001033!5.10e-09!3;UBERON:0010056!5.10e-09!3;UBERON:0000344!6.74e-09!12;UBERON:0002110!1.66e-08!3;UBERON:0006242!1.66e-08!3;UBERON:0000974!2.12e-08!10;UBERON:0000166!2.60e-08!21;UBERON:0000161!6.94e-08!35;UBERON:0001004!1.91e-07!72;UBERON:0000165!4.70e-07!28;UBERON:0000930!4.70e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0000974;2.51e-17;6!UBERON:0001723;6.48e-16;3!UBERON:0001033;6.48e-16;3!UBERON:0000997;1.05e-12;1!UBERON:0004913;1.05e-12;1!UBERON:0005056;1.05e-12;1!UBERON:0003703;1.05e-12;1!UBERON:0004176;1.05e-12;1!UBERON:0001174;1.05e-12;1!UBERON:0004914;1.05e-12;1!UBERON:0003343;3.26e-12;4!UBERON:0004785;3.26e-12;4!UBERON:0000964;6.02e-12;4!UBERON:0010409;6.02e-12;4!UBERON:0003729;2.68e-08;13!UBERON:0007811;3.47e-08;52!UBERON:0000020;5.96e-08;23!UBERON:0001032;1.26e-07;24!UBERON:0004456;1.26e-07;24!UBERON:0002294;2.64e-07;7!UBERON:0001173;2.64e-07;7!UBERON:0000341;8.52e-07;2!UBERON:0002419;8.52e-07;2!UBERON:0007771;8.52e-07;2!UBERON:0003297;8.52e-07;2!UBERON:0001821;8.52e-07;2!UBERON:0003487;8.52e-07;2!UBERON:0001820;8.52e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,6.74e-16,3;UBERON:0001033,6.74e-16,3;UBERON:0010056,6.74e-16,3;UBERON:0000997,9.92e-13,1;UBERON:0005056,9.92e-13,1;UBERON:0004913,1.11e-12,1;UBERON:0003703,1.11e-12,1;UBERON:0001174,1.11e-12,1;UBERON:0004914,1.11e-12,1;UBERON:0003343,3.45e-12,4;UBERON:0004785,3.45e-12,4;UBERON:0000964,6.37e-12,4;UBERON:0010409,6.37e-12,4;UBERON:0004348,6.37e-12,4;UBERON:0005427,6.37e-12,4;UBERON:0000974,1.20e-10,10;UBERON:0003102,8.00e-10,99;UBERON:0000166,2.24e-08,22;UBERON:0003729,2.89e-08,13;UBERON:0000153,3.95e-08,62;UBERON:0007811,3.95e-08,62;UBERON:0001444,8.68e-08,49;UBERON:0000161,1.03e-07,36;UBERON:0000020,1.29e-07,24;UBERON:0001032,1.29e-07,24;UBERON:0004456,1.29e-07,24;UBERON:0000341,7.61e-07,2;UBERON:0002419,8.52e-07,2;UBERON:0007771,8.52e-07,2;UBERON:0003297,8.52e-07,2;UBERON:0001821,8.52e-07,2;UBERON:0003487,8.52e-07,2;UBERON:0001820,8.52e-07,2;UBERON:0005089,8.52e-07,2;UBERON:0005088,8.52e-07,2;UBERON:0000033,9.22e-07,56 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82147644146271,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0,1.14721838155602,0.609868530647977,0,0.464775771478074,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768251997860379,1.1240175325762,0.301586917234893,0.0925884451585296,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,1.91691339582606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802025881213139,3.68323955743585,0,0,0,0.902399225814824,0.308061348417659,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.539210106883961,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54780233277382,0,0,0,0,0,0,1.93978032976839,0,0,0,0,0,0.391102765469606,0.320635281006135,1.92107695265417,0.999048047910651,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275078873194468,0.415440338029185,0,0,0.0607495566580247,1.0063040627978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0.704815022316672,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0.260994291965212,0,0,0,0,0.308801447160972,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.559518030877778,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0.0981477185010256,0.11796972334774,5.31942935712869,1.15525666150338,0,0,0,0.300841313397029,0,0,0,0,2.21784129325568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747667062745149,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0.098150233615243,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,1.42843150884526,0,1.04313776695919,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,1.49263787330687,0,0.0645889098360061,0,0,0,0,3.9189014621453,0.684466602170562,0.26940821205835,0.286888821570705,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:51520513..51520535,- | |||
}} | }} |
Latest revision as of 16:36, 27 July 2015
Short description: | p@chr19:51520513..51520535, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:51520513..51520535, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 7.65e-23 | 2 |
squamous epithelial cell | 4.78e-13 | 63 |
general ecto-epithelial cell | 9.50e-13 | 14 |
sebum secreting cell | 8.52e-07 | 2 |
epithelial cell of sweat gland | 8.52e-07 | 2 |
epithelial cell of skin gland | 8.52e-07 | 2 |
acinar cell of sebaceous gland | 8.52e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
tongue | 6.74e-16 | 3 |
gustatory system | 6.74e-16 | 3 |
future tongue | 6.74e-16 | 3 |
mammalian vulva | 9.92e-13 | 1 |
external female genitalia | 9.92e-13 | 1 |
hepatopancreatic ampulla | 1.11e-12 | 1 |
extrahepatic bile duct | 1.11e-12 | 1 |
common bile duct | 1.11e-12 | 1 |
duodenal papilla | 1.11e-12 | 1 |
mucosa of oral region | 3.45e-12 | 4 |
respiratory system mucosa | 3.45e-12 | 4 |
cornea | 6.37e-12 | 4 |
eye surface | 6.37e-12 | 4 |
optic eminence | 6.37e-12 | 4 |
corneal primordium | 6.37e-12 | 4 |
neck | 1.20e-10 | 10 |
surface structure | 8.00e-10 | 99 |
oral opening | 2.24e-08 | 22 |
mouth mucosa | 2.89e-08 | 13 |
anterior region of body | 3.95e-08 | 62 |
craniocervical region | 3.95e-08 | 62 |
subdivision of head | 8.68e-08 | 49 |
orifice | 1.03e-07 | 36 |
sense organ | 1.29e-07 | 24 |
sensory system | 1.29e-07 | 24 |
entire sense organ system | 1.29e-07 | 24 |
throat | 7.61e-07 | 2 |
skin gland | 8.52e-07 | 2 |
epidermis gland | 8.52e-07 | 2 |
gland of integumental system | 8.52e-07 | 2 |
sebaceous gland | 8.52e-07 | 2 |
skin sebaceous gland | 8.52e-07 | 2 |
sweat gland | 8.52e-07 | 2 |
sweat gland placode | 8.52e-07 | 2 |
sebaceous gland placode | 8.52e-07 | 2 |
head | 9.22e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 9.43e-20 | 14 |
skin squamous cell carcinoma | 4.81e-12 | 1 |
keratoacanthoma | 4.81e-12 | 1 |
tubular adenocarcinoma | 5.73e-07 | 2 |