FFCP PHASE1:Hg19::chr19:56200081..56200096,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:56200081..56200096,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_at_chr19:56200081..56200096,+ | |||
|id=chr19:56200081..56200096,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.33e-10!4 | |||
|ontology_enrichment_celltype_v019=CL:0002563;2.52e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.43e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0006242;3.64e-29;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.86e-25!35;UBERON:0000160!2.89e-21!27;UBERON:0001155!2.02e-17!9;UBERON:0000059!2.67e-14!11;UBERON:0001154!8.22e-11!1;UBERON:0001153!8.22e-11!1;UBERON:0001242!1.33e-10!4;UBERON:0001262!1.33e-10!4;UBERON:0004786!1.33e-10!4;UBERON:0004808!1.33e-10!4;UBERON:0001277!1.33e-10!4;UBERON:0003350!1.18e-08!5;UBERON:0004907!1.54e-08!5;UBERON:0004921!2.57e-07!129;UBERON:0004185!2.57e-07!129;UBERON:0001007!4.97e-07!155;UBERON:0001555!4.97e-07!155;UBERON:0007026!4.97e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.94e-56;17!UBERON:0002108;1.94e-51;4!UBERON:0005409;2.70e-44;22!UBERON:0004921;3.77e-27;33!UBERON:0001155;1.23e-13;9!UBERON:0001555;1.26e-11;54!UBERON:0000059;2.42e-11;11!UBERON:0002114;9.90e-11;2!UBERON:0002110;1.14e-10;3!UBERON:0001007;7.37e-09;81!UBERON:0001242;2.52e-08;4!UBERON:0001262;2.52e-08;4!UBERON:0004786;2.52e-08;4!UBERON:0004808;2.52e-08;4!UBERON:0001277;2.52e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.85e-56,17;UBERON:0002108,1.63e-51,4;UBERON:0005409,2.92e-39,25;UBERON:0001155,1.31e-13,9;UBERON:0000059,2.55e-11,11;UBERON:0002114,9.90e-11,2;UBERON:0002110,1.20e-10,3;UBERON:0006242,1.20e-10,3;UBERON:0001007,1.06e-09,145;UBERON:0001555,1.06e-09,145;UBERON:0007026,1.06e-09,145;UBERON:0004921,8.24e-09,118;UBERON:0004119,8.31e-09,160;UBERON:0000925,8.31e-09,160;UBERON:0006595,8.31e-09,160;UBERON:0001242,2.43e-08,4;UBERON:0001262,2.43e-08,4;UBERON:0004786,2.43e-08,4;UBERON:0004808,2.43e-08,4;UBERON:0001277,2.43e-08,4 | |||
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|short_description=p@chr19:56200081..56200096,+ | |||
}} | }} |
Latest revision as of 17:36, 27 July 2015
Short description: | p@chr19:56200081..56200096, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:56200081..56200096, + |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.85e-56 | 17 |
small intestine | 1.63e-51 | 4 |
gastrointestinal system | 2.92e-39 | 25 |
colon | 1.31e-13 | 9 |
large intestine | 2.55e-11 | 11 |
duodenum | 9.90e-11 | 2 |
gallbladder | 1.20e-10 | 3 |
gall bladder primordium | 1.20e-10 | 3 |
digestive system | 1.06e-09 | 145 |
digestive tract | 1.06e-09 | 145 |
primitive gut | 1.06e-09 | 145 |
subdivision of digestive tract | 8.24e-09 | 118 |
endoderm-derived structure | 8.31e-09 | 160 |
endoderm | 8.31e-09 | 160 |
presumptive endoderm | 8.31e-09 | 160 |
intestinal mucosa | 2.43e-08 | 4 |
wall of intestine | 2.43e-08 | 4 |
gastrointestinal system mucosa | 2.43e-08 | 4 |
gastrointestinal system epithelium | 2.43e-08 | 4 |
intestinal epithelium | 2.43e-08 | 4 |