FFCP PHASE1:Hg19::chr19:59084647..59084721,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:59084647..59084721,- to FFCP PHASE1:Hg19::chr19:59084647..59084721,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7593 | |EntrezGene=7593 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13108 | |HGNC=13108 | ||
|TSSclassifier=strong | |||
|UniProt=P28698 | |UniProt=P28698 | ||
|association_with_transcript=220bp_to_ENST00000215057,NM_198055,uc002qto.2_5end | |||
|cluster_id=chr19:59084647..59084721,- | |||
|description=CAGE_peak_1_at_MZF1_5end | |||
|id=chr19:59084647..59084721,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.53e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.51e-19!57;UBERON:0005068!1.51e-19!57;UBERON:0006241!1.51e-19!57;UBERON:0007135!1.51e-19!57;UBERON:0000955!2.33e-18!69;UBERON:0006238!2.33e-18!69;UBERON:0007023!2.33e-18!115;UBERON:0002616!8.68e-18!59;UBERON:0000073!2.04e-17!94;UBERON:0001016!2.04e-17!94;UBERON:0002780!2.54e-17!41;UBERON:0001890!2.54e-17!41;UBERON:0006240!2.54e-17!41;UBERON:0003080!8.98e-17!42;UBERON:0005743!1.29e-16!86;UBERON:0001017!1.37e-16!82;UBERON:0001893!1.80e-14!34;UBERON:0002020!6.17e-14!34;UBERON:0003528!6.17e-14!34;UBERON:0002791!6.25e-14!33;UBERON:0001869!1.50e-13!32;UBERON:0002346!2.55e-13!90;UBERON:0003075!1.36e-12!86;UBERON:0007284!1.36e-12!86;UBERON:0002619!6.62e-12!22;UBERON:0001950!6.70e-11!20;UBERON:0003056!1.67e-10!61;UBERON:0000956!5.22e-10!25;UBERON:0000203!5.22e-10!25;UBERON:0000153!6.49e-10!129;UBERON:0007811!6.49e-10!129;UBERON:0000033!2.60e-09!123;UBERON:0000924!5.57e-08!173;UBERON:0006601!5.57e-08!173;UBERON:0004121!1.98e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.12e-13;41!UBERON:0001890;4.12e-13;41!UBERON:0001893;9.33e-13;34!UBERON:0001869;2.26e-12;32!UBERON:0002791;2.73e-12;32!UBERON:0003528;2.83e-12;34!UBERON:0002020;2.83e-12;34!UBERON:0002619;4.89e-12;22!UBERON:0000073;6.55e-12;53!UBERON:0002616;6.55e-12;53!UBERON:0001950;4.68e-11;20!UBERON:0000956;3.95e-10;25!UBERON:0000203;3.95e-10;25!UBERON:0000955;1.21e-09;68!UBERON:0001017;8.63e-09;75!UBERON:0001016;1.03e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.89e-20,56;UBERON:0005068,4.89e-20,56;UBERON:0006241,4.89e-20,56;UBERON:0007135,4.89e-20,56;UBERON:0000073,3.18e-19,53;UBERON:0002616,3.18e-19,53;UBERON:0000955,1.04e-18,68;UBERON:0006238,1.04e-18,68;UBERON:0007023,6.64e-18,114;UBERON:0001016,1.24e-17,89;UBERON:0002780,2.52e-17,41;UBERON:0001890,2.52e-17,41;UBERON:0003080,2.52e-17,41;UBERON:0006240,2.52e-17,41;UBERON:0001017,7.21e-17,81;UBERON:0001893,1.79e-14,34;UBERON:0002346,5.32e-14,86;UBERON:0003528,6.13e-14,34;UBERON:0002020,6.13e-14,34;UBERON:0001869,1.50e-13,32;UBERON:0002791,2.01e-13,32;UBERON:0003075,2.87e-13,82;UBERON:0007284,2.87e-13,82;UBERON:0002619,6.59e-12,22;UBERON:0003056,3.77e-11,61;UBERON:0001950,6.67e-11,20;UBERON:0000956,5.20e-10,25;UBERON:0000203,5.20e-10,25;UBERON:0010371,3.78e-08,104;UBERON:0004121,4.71e-08,171;UBERON:0000924,4.71e-08,171;UBERON:0006601,4.71e-08,171 | |||
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| ||
|short_description=p1@MZF1 | |||
}} | }} |
Latest revision as of 08:58, 20 September 2015
Short description: | p1@MZF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MZF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 220bp_to_ENST00000215057, NM_198055, uc002qto.2_5end |
EntrezGene: | MZF1 |
HGNC: | 13108 |
UniProt: | P28698 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 4.89e-20 | 56 |
neural rod | 4.89e-20 | 56 |
future spinal cord | 4.89e-20 | 56 |
neural keel | 4.89e-20 | 56 |
regional part of nervous system | 3.18e-19 | 53 |
regional part of brain | 3.18e-19 | 53 |
brain | 1.04e-18 | 68 |
future brain | 1.04e-18 | 68 |
adult organism | 6.64e-18 | 114 |
nervous system | 1.24e-17 | 89 |
regional part of forebrain | 2.52e-17 | 41 |
forebrain | 2.52e-17 | 41 |
anterior neural tube | 2.52e-17 | 41 |
future forebrain | 2.52e-17 | 41 |
central nervous system | 7.21e-17 | 81 |
telencephalon | 1.79e-14 | 34 |
neurectoderm | 5.32e-14 | 86 |
brain grey matter | 6.13e-14 | 34 |
gray matter | 6.13e-14 | 34 |
cerebral hemisphere | 1.50e-13 | 32 |
regional part of telencephalon | 2.01e-13 | 32 |
neural plate | 2.87e-13 | 82 |
presumptive neural plate | 2.87e-13 | 82 |
regional part of cerebral cortex | 6.59e-12 | 22 |
pre-chordal neural plate | 3.77e-11 | 61 |
neocortex | 6.67e-11 | 20 |
cerebral cortex | 5.20e-10 | 25 |
pallium | 5.20e-10 | 25 |
ecto-epithelium | 3.78e-08 | 104 |
ectoderm-derived structure | 4.71e-08 | 171 |
ectoderm | 4.71e-08 | 171 |
presumptive ectoderm | 4.71e-08 | 171 |