FFCP PHASE1:Hg19::chr1:101702482..101702493,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:101702482..101702493,+ to FFCP PHASE1:Hg19::chr1:101702482..101702493,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1901 | |EntrezGene=1901 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3165 | |HGNC=3165 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000475821_5end | |||
|cluster_id=chr1:101702482..101702493,+ | |||
|coexpression_cluster_id=C2509 | |||
|description=CAGE_peak_6_at_S1PR1_5end | |||
|id=chr1:101702482..101702493,+ | |||
|ontology_enrichment_celltype=CL:0000115!8.09e-20!35;CL:0002139!6.78e-19!24;CL:0002078!2.43e-14!44;CL:0000071!2.77e-14!18;CL:0002546!2.77e-14!18;CL:0000542!1.72e-12!53;CL:0000051!1.72e-12!53;CL:0000838!2.80e-12!52;CL:0000213!3.74e-10!57;CL:0000215!3.74e-10!57;CL:0000084!9.31e-09!25;CL:0000827!9.31e-09!25;CL:1000413!2.43e-08!9;CL:0000791!2.07e-07!18;CL:0000789!2.07e-07!18;CL:0002420!2.07e-07!18;CL:0002419!2.07e-07!18;CL:0000790!2.07e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.18e-26;24!CL:0000115;1.48e-22;36!CL:0000071;9.83e-20;18!CL:0002078;1.81e-13;45!CL:1000413;3.22e-11;9!CL:0000084;4.79e-10;25!CL:0000213;4.31e-09;58!CL:0000215;4.31e-09;58!CL:0000791;2.08e-08;18!CL:0000789;2.08e-08;18!CL:0002419;2.08e-08;18!CL:0002138;3.27e-08;6!CL:0000625;5.40e-08;11!CL:0002544;6.73e-08;6!CL:0000542;2.93e-07;53!CL:0002543;7.73e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.78e-26,24;CL:0000115,2.76e-26,36;CL:0002078,7.40e-21,45;CL:0000071,7.76e-20,18;CL:0002546,7.76e-20,18;CL:0000213,3.74e-14,58;CL:0000215,3.74e-14,58;CL:1000413,2.67e-11,9;CL:0000838,7.19e-11,52;CL:0000542,1.75e-10,53;CL:0000051,1.75e-10,53;CL:0000084,8.21e-10,25;CL:0000827,8.21e-10,25;CL:0000791,2.61e-08,18;CL:0000789,2.61e-08,18;CL:0002420,2.61e-08,18;CL:0002419,2.61e-08,18;CL:0000790,2.61e-08,18;CL:0005020,3.41e-08,6;CL:0002138,3.41e-08,6;CL:0005022,3.41e-08,6;CL:0002544,5.62e-08,6;CL:0000625,5.75e-08,11;CL:0002543,7.03e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;9.83e-20;18!CL:0000790;2.08e-08;18!CL:0005022;3.27e-08;6!CL:0000051;2.93e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.34e-35!115;UBERON:0001986!2.77e-14!18;UBERON:0004638!2.77e-14!18;UBERON:0004852!2.77e-14!18;UBERON:0001009!4.90e-13!113;UBERON:0004535!1.22e-11!110;UBERON:0000055!2.06e-11!69;UBERON:0001049!1.01e-10!57;UBERON:0005068!1.01e-10!57;UBERON:0006241!1.01e-10!57;UBERON:0007135!1.01e-10!57;UBERON:0000487!5.97e-10!22;UBERON:0000025!1.54e-09!194;UBERON:0001981!4.34e-09!60;UBERON:0007500!4.34e-09!60;UBERON:0004537!4.34e-09!60;UBERON:0006965!4.34e-09!60;UBERON:0004111!4.55e-09!241;UBERON:0004872!8.16e-09!84;UBERON:0002616!1.15e-08!59;UBERON:0002049!1.46e-08!79;UBERON:0007798!1.46e-08!79;UBERON:0003915!2.43e-08!9;UBERON:0004700!2.43e-08!9;UBERON:0001917!2.43e-08!9;UBERON:0003080!5.75e-08!42;UBERON:0006914!1.02e-07!25;UBERON:0003075!1.55e-07!86;UBERON:0007284!1.55e-07!86;UBERON:0002780!2.00e-07!41;UBERON:0001890!2.00e-07!41;UBERON:0006240!2.00e-07!41;UBERON:0000477!2.69e-07!286;UBERON:0000955!4.26e-07!69;UBERON:0006238!4.26e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;9.83e-20;18!UBERON:0001986;9.83e-20;18!UBERON:0004852;9.83e-20;18!UBERON:0000487;7.78e-15;22!UBERON:0006914;3.12e-12;25!UBERON:0003915;3.22e-11;9!UBERON:0004700;3.22e-11;9!UBERON:0001917;3.22e-11;9!UBERON:0007023;2.20e-08;114!UBERON:0000490;3.09e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.90e-33,114;UBERON:0004638,7.76e-20,18;UBERON:0001986,7.76e-20,18;UBERON:0004852,7.76e-20,18;UBERON:0000487,6.44e-15,22;UBERON:0001009,1.51e-12,112;UBERON:0006914,2.65e-12,25;UBERON:0000055,1.25e-11,68;UBERON:0003915,2.67e-11,9;UBERON:0004700,2.67e-11,9;UBERON:0001917,2.67e-11,9;UBERON:0004535,7.41e-11,109;UBERON:0000025,1.44e-10,192;UBERON:0004111,7.47e-10,240;UBERON:0001049,1.43e-09,56;UBERON:0005068,1.43e-09,56;UBERON:0006241,1.43e-09,56;UBERON:0007135,1.43e-09,56;UBERON:0000073,5.21e-09,53;UBERON:0002616,5.21e-09,53;UBERON:0004872,6.88e-09,83;UBERON:0002049,1.09e-08,78;UBERON:0007798,1.09e-08,78;UBERON:0007500,1.21e-08,59;UBERON:0001981,1.21e-08,59;UBERON:0004537,1.21e-08,59;UBERON:0006965,1.21e-08,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,1.48519623552056,0.662794751455832,0,0,0.730310090387373,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,4.32700704533794,2.68680578668049,0.464448369948228,0,0,0,0,0,0,1.66198622559563,0.401088894940283,0.868043482863407,1.11957737119962,0.32389366601898,0.515151135268373,0.872389432677388,0,0.970336244751265,0.464858073811369,0,0.309706370895104,0.28769239232215,0,0,0,0.645484683583826,0,0.376484679085209,0,0.224723484445085,0,0.320929027076094,1.27867425159808,0,0.398927315243264,0,0,0,0,0,0,0,0,0.736555271975129,0,0,0,0,0,0,0,0.285012743741249,0,0,1.75996244461323,2.18455444504853,0.889509253863555,7.68114400619713,1.60158394814405,1.72425731986345,1.98313461835459,2.86216126360609,3.41527781465669,2.93618594685469,2.6759125968766,0,1.12101712596307,0,2.16380747125216,2.75107533924415,8.01845846098086,1.17030546773475,0.977766799900771,0.946895611469467,0,1.44833593950726,0.589211814949674,1.32920336750173,2.70803863765016,1.28091319725675,1.43065282315866,1.97325485524411,1.93445012450094,2.89803085735052,1.4828656316206,0.802622484269139,1.04535523804977,2.94604291013672,1.14966148080576,2.06176467289578,1.26509846009751,2.22995790026868,3.90650072313851,1.90090408889675,1.95747654801105,1.02389288923535,1.24930726552346,1.18388626022008,1.64225599384209,3.22570789159572,2.94184215361858,1.01377082717959,0,0,0.383587685530591,0,0,0,0,0.486634870302636,0,0,0,1.0478326039817,0,0,0,0,0.132957960518865,0,0,0.371457501329565,6.75792185046797,9.46258054616737,7.98423153697467,3.95715559346807,14.6824802673467,6.60283300656162,9.61376846069329,5.94358546089456,9.60568909254118,8.03329470635209,7.65375702507379,9.12326526862215,11.470916704764,12.8682078121054,4.86085168729056,3.30408994651095,3.59246996201872,4.16662477788292,1.53316637465883,10.4419222552494,3.66403487860815,1.31780417436063,3.87780264148325,0,0,0.25326102332916,0.132409180813219,0,0,0,1.06748995729705,0,0,2.55950276932407,1.63461903113459,0.151357427644931,0,0,0,0.570471821544449,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453728732640084,0,0.213557388818567,0.423863802319124,0.300091096084402,0.206105058476878,0.772921620136887,0,1.68776332241266,1.16924406193438,0.504867548488229,0.276149695926898,0,0.710019185033229,0,0.508681776931463,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,11.0723318193697,1.40241773803446,0,0,0,0,0.590789906681404,0,0,0,0,0,0.100528972411631,0,0.325808305310325,0,0,0,0,12.1267816119302,9.25971025153221,8.94194515502612,0,0,0,0,0.297262324577456,0,0,0,0.179117045405697,0,0,0.985326475791887,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797814349754612,0,0,1.41849132023278,0,0,0.542621605391443,0,0.977208552881205,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,2.36436912242313,2.15627574859517,0.898401253958239,0,0,0,0,0,0,0,0.414415513436035,1.71768088406796,4.00136416847742,0.271265023699736,0,0,0.157702415033935,0,0,2.27407504055985,2.0694614258501,0,0.553107505625109,0.173767228936166,0,0.343143423810856,1.03384013061444,0.431428401637234,2.02782359826544,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0.182091168006717,0.262248829918848,0,0,0,0,0,10.2360045663807,7.31402932689017,4.75015015424707,12.3381802152231,0,1.00337954770971,0,0,0,0,0,0.256450125116389,0,0,2.16386124460217,0.0915694648183434,0,0,0,0,0,0,0,0,0.429680979473094,0.290033387828457,0.170453254832202,0.0890320356467374,0,0,0,0.10115778085555,0.464845549297286,0,0,0,0,1.73986598415015,0.18532421910392,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0.359744915166629,0,0,0.404364963146632,0,0.421258456238981,0,6.58026422004468,3.16950440270266,0,0.424216295861138,0,0.551365343546124,1.32687795048244,0,0,1.9676842561399,0.202910376962704,0.6196469961995,0,0.286822704408103,0.491245205065606,0.35667105148125,0,0,0,0,0.699869440489966,0,0,0,2.54188262097304,0,0,0,0,1.01489521846434,2.29391162142713,1.13929437434833,2.38231775457789,0.822724546172388,2.59389324477087,0.540031437238115,1.58625035258854,0,0,0,0.929015875628594,0.432807638929335,0,0.478278818186467,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8671625210234,0.728163130497081,2.563197838382,0,0.23874448473769,0,0,4.97073823883149,2.39138007897872,0.222617410045812,2.63686198762815,0,1.9924798825107,2.21027132424918,0,0,0.246169610922139,0,0,0,0,1.87422470710174,0,0,0.969332746095218,1.11321717794222,1.99613798001194,0,0,10.1499940560871,0,0,0,0,0,0,2.65722415744152,1.68835014075571,1.52581736317083,2.54332297841817,0.295547618953547,1.97446857438575,0,0,1.61595542857974,0,0,0,0,0,0,1.5991043280559,1.02193298195737,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0,0,0,0,1.85760885457012,1.83309043480088,2.6686901581256,0.370691816839509,0.939797545549098,0.741412462787447,1.60515529459758,1.1713222286267,0.182454789215666,0,0,1.18375320854817,1.20990716048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| ||
|short_description=p6@S1PR1 | |||
}} | }} |
Latest revision as of 05:29, 25 September 2015
Short description: | p6@S1PR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_S1PR1_5end |
Coexpression cluster: | C2509_adipose_heart_lung_Renal_Endothelial_CD4_Hepatic |
Association with transcript: | 0bp_to_ENST00000475821_5end |
EntrezGene: | S1PR1 |
HGNC: | 3165 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.78e-26 | 24 |
endothelial cell | 2.76e-26 | 36 |
meso-epithelial cell | 7.40e-21 | 45 |
blood vessel endothelial cell | 7.76e-20 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.76e-20 | 18 |
lining cell | 3.74e-14 | 58 |
barrier cell | 3.74e-14 | 58 |
endothelial cell of artery | 2.67e-11 | 9 |
lymphoid lineage restricted progenitor cell | 7.19e-11 | 52 |
lymphocyte | 1.75e-10 | 53 |
common lymphoid progenitor | 1.75e-10 | 53 |
T cell | 8.21e-10 | 25 |
pro-T cell | 8.21e-10 | 25 |
mature alpha-beta T cell | 2.61e-08 | 18 |
alpha-beta T cell | 2.61e-08 | 18 |
immature T cell | 2.61e-08 | 18 |
mature T cell | 2.61e-08 | 18 |
immature alpha-beta T cell | 2.61e-08 | 18 |
lymphangioblast | 3.41e-08 | 6 |
endothelial cell of lymphatic vessel | 3.41e-08 | 6 |
vascular lymphangioblast | 3.41e-08 | 6 |
aortic endothelial cell | 5.62e-08 | 6 |
CD8-positive, alpha-beta T cell | 5.75e-08 | 11 |
vein endothelial cell | 7.03e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.90e-33 | 114 |
blood vessel endothelium | 7.76e-20 | 18 |
endothelium | 7.76e-20 | 18 |
cardiovascular system endothelium | 7.76e-20 | 18 |
simple squamous epithelium | 6.44e-15 | 22 |
circulatory system | 1.51e-12 | 112 |
squamous epithelium | 2.65e-12 | 25 |
vessel | 1.25e-11 | 68 |
endothelial tube | 2.67e-11 | 9 |
arterial system endothelium | 2.67e-11 | 9 |
endothelium of artery | 2.67e-11 | 9 |
cardiovascular system | 7.41e-11 | 109 |
tube | 1.44e-10 | 192 |
anatomical conduit | 7.47e-10 | 240 |
neural tube | 1.43e-09 | 56 |
neural rod | 1.43e-09 | 56 |
future spinal cord | 1.43e-09 | 56 |
neural keel | 1.43e-09 | 56 |
regional part of nervous system | 5.21e-09 | 53 |
regional part of brain | 5.21e-09 | 53 |
splanchnic layer of lateral plate mesoderm | 6.88e-09 | 83 |
vasculature | 1.09e-08 | 78 |
vascular system | 1.09e-08 | 78 |
epithelial tube open at both ends | 1.21e-08 | 59 |
blood vessel | 1.21e-08 | 59 |
blood vasculature | 1.21e-08 | 59 |
vascular cord | 1.21e-08 | 59 |