FFCP PHASE1:Hg19::chr1:107599361..107599368,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55170 | |EntrezGene=55170 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18241 | |HGNC=18241 | ||
|TSSclassifier=strong | |||
|UniProt=B4DNF6 | |UniProt=B4DNF6 | ||
|association_with_transcript=35bp_to_ENST00000540389_5end | |||
|cluster_id=chr1:107599361..107599368,+ | |||
|description=CAGE_peak_5_at_PRMT6_5end | |||
|id=chr1:107599361..107599368,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000244;1.13e-13;4!CL:0000731;1.13e-13;4!CL:0000333;3.26e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.00e-13,4;CL:0000731,1.00e-13,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!8.59e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:169;1.44e-09;6!DOID:1036;1.69e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.44e-09,6;DOID:1036,1.80e-07,8 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;3.26e-11;5!UBERON:0002410;3.26e-11;5!UBERON:0000365;3.26e-11;5!UBERON:0005910;1.44e-09;6!UBERON:0006554;1.13e-07;30!UBERON:0001008;1.13e-07;30!UBERON:0000010;8.37e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,2.94e-11,5;UBERON:0000013,3.26e-11,5;UBERON:0002410,3.26e-11,5;UBERON:0005910,1.32e-09,6;UBERON:0000010,8.37e-07,8 | |||
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| 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| ||
|short_description=p5@PRMT6 | |||
}} | }} |
Latest revision as of 07:33, 25 September 2015
Short description: | p5@PRMT6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PRMT6_5end |
Coexpression cluster: | NA |
Association with transcript: | 35bp_to_ENST00000540389_5end |
EntrezGene: | PRMT6 |
HGNC: | 18241 |
UniProt: | B4DNF6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.00e-13 | 4 |
urothelial cell | 1.00e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
urothelium | 2.94e-11 | 5 |
sympathetic nervous system | 3.26e-11 | 5 |
autonomic nervous system | 3.26e-11 | 5 |
transitional epithelium | 1.32e-09 | 6 |
peripheral nervous system | 8.37e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.44e-09 | 6 |
chronic leukemia | 1.80e-07 | 8 |