FFCP PHASE1:Hg19::chr1:154475312..154475342,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:154475312..154475342,- to FFCP PHASE1:Hg19::chr1:154475312..154475342,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:154475312..154475342,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_at_chr1:154475312..154475342,- | |||
|id=chr1:154475312..154475342,- | |||
|ontology_enrichment_celltype=CL:0000115!4.48e-39!35;CL:0002139!1.26e-35!24;CL:0002078!9.89e-29!44;CL:0000071!1.92e-27!18;CL:0002546!1.92e-27!18;CL:0000213!1.11e-19!57;CL:0000215!1.11e-19!57;CL:1000413!1.82e-14!9;CL:0002543!1.22e-10!6;CL:0002544!3.51e-10!6;CL:0005020!1.06e-09!6;CL:0002138!1.06e-09!6;CL:0005022!1.06e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.01e-75;24!CL:0000071;3.18e-73;18!CL:0000115;7.10e-72;36!CL:0002078;7.67e-43;45!CL:1000413;1.37e-41;9!CL:0000213;5.25e-30;58!CL:0000215;5.25e-30;58!CL:0002543;7.45e-29;6!CL:0002544;4.02e-28;6!CL:0002188;3.93e-16;5!CL:0000076;8.11e-16;63!CL:0002618;3.94e-15;3!CL:1000746;1.49e-11;7!CL:1000612;1.49e-11;7!CL:0002545;8.70e-11;2!CL:0000123;2.03e-10;2!CL:0000242;2.03e-10;2!CL:0002138;8.48e-08;6!CL:0002144;3.20e-07;3!CL:0002681;9.28e-07;12!CL:0002584;9.28e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,5.85e-85,36;CL:0002139,1.65e-75,24;CL:0000071,3.89e-73,18;CL:0002546,3.89e-73,18;CL:0002078,8.65e-67,45;CL:0000213,1.71e-50,58;CL:0000215,1.71e-50,58;CL:1000413,4.86e-41,9;CL:0002543,2.79e-29,6;CL:0002544,7.07e-28,6;CL:0000076,4.65e-23,63;CL:0000222,4.06e-21,121;CL:0002188,3.52e-16,5;CL:0002618,2.27e-15,3;CL:1000746,1.38e-11,7;CL:1000612,1.38e-11,7;CL:0002545,1.39e-10,2;CL:0000242,1.61e-10,2;CL:0000066,1.29e-09,253;CL:0002321,8.22e-09,250;CL:0005020,6.81e-08,6;CL:0002138,6.81e-08,6;CL:0005022,6.81e-08,6;CL:0002144,3.02e-07,3;CL:0002681,8.89e-07,12;CL:0002584,8.89e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;3.18e-73;18!CL:0000222;6.74e-09;121!CL:0005022;8.48e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.51e-35!115;UBERON:0001986!1.92e-27!18;UBERON:0004638!1.92e-27!18;UBERON:0004852!1.92e-27!18;UBERON:0000487!2.76e-21!22;UBERON:0004111!3.61e-18!241;UBERON:0006914!5.56e-18!25;UBERON:0000025!5.52e-17!194;UBERON:0000477!2.95e-16!286;UBERON:0003915!1.82e-14!9;UBERON:0004700!1.82e-14!9;UBERON:0001917!1.82e-14!9;UBERON:0000055!7.69e-13!69;UBERON:0001049!1.69e-11!57;UBERON:0005068!1.69e-11!57;UBERON:0006241!1.69e-11!57;UBERON:0007135!1.69e-11!57;UBERON:0004872!5.29e-11!84;UBERON:0002049!4.52e-10!79;UBERON:0007798!4.52e-10!79;UBERON:0001009!7.11e-10!113;UBERON:0000467!9.24e-10!625;UBERON:0000480!1.08e-09!626;UBERON:0000468!1.68e-09!659;UBERON:0003080!2.82e-09!42;UBERON:0002791!2.97e-09!33;UBERON:0002465!3.27e-09!10;UBERON:0001981!4.09e-09!60;UBERON:0007500!4.09e-09!60;UBERON:0004537!4.09e-09!60;UBERON:0006965!4.09e-09!60;UBERON:0002616!5.13e-09!59;UBERON:0002020!5.59e-09!34;UBERON:0003528!5.59e-09!34;UBERON:0001893!7.52e-09!34;UBERON:0000483!9.38e-09!309;UBERON:0003075!1.23e-08!86;UBERON:0007284!1.23e-08!86;UBERON:0001638!1.68e-08!9;UBERON:0003920!1.68e-08!9;UBERON:0004582!1.68e-08!9;UBERON:0000119!1.72e-08!312;UBERON:0002780!2.00e-08!41;UBERON:0001890!2.00e-08!41;UBERON:0006240!2.00e-08!41;UBERON:0004535!2.43e-08!110;UBERON:0003103!2.91e-08!69;UBERON:0003914!2.99e-08!118;UBERON:0003135!6.77e-08!11;UBERON:0002346!6.88e-08!90;UBERON:0001869!1.79e-07!32;UBERON:0001473!5.39e-07!8;UBERON:0004536!5.39e-07!8;UBERON:0006558!5.39e-07!8;UBERON:0000922!6.55e-07!612;UBERON:0002619!7.61e-07!22;UBERON:0000473!7.93e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.18e-73;18!UBERON:0001986;3.18e-73;18!UBERON:0004852;3.18e-73;18!UBERON:0000487;3.32e-59;22!UBERON:0006914;1.24e-51;25!UBERON:0003915;1.37e-41;9!UBERON:0004700;1.37e-41;9!UBERON:0001917;1.37e-41;9!UBERON:0000490;4.29e-35;33!UBERON:0001638;4.69e-19;9!UBERON:0003920;4.69e-19;9!UBERON:0004582;4.69e-19;9!UBERON:0007500;4.18e-15;56!UBERON:0001981;4.18e-15;56!UBERON:0004537;4.18e-15;56!UBERON:0000055;1.47e-14;65!UBERON:0000074;1.49e-11;7!UBERON:0001229;1.49e-11;7!UBERON:0003914;4.51e-11;74!UBERON:0005800;8.70e-11;2!UBERON:0001515;8.70e-11;2!UBERON:0002049;5.66e-10;75!UBERON:0007798;5.66e-10;75!UBERON:0002066;2.85e-09;5!UBERON:0000025;1.39e-08;93!UBERON:0000353;3.78e-08;15!UBERON:0001009;4.11e-08;112!UBERON:0001637;1.09e-07;42!UBERON:0003509;1.09e-07;42!UBERON:0004572;1.09e-07;42!UBERON:0000947;1.25e-07;21!UBERON:0010191;1.25e-07;21!UBERON:0010523;3.20e-07;3!UBERON:0001915;3.20e-07;3!UBERON:0001982;3.20e-07;3!UBERON:0000483;6.14e-07;136!UBERON:0004535;8.92e-07;109!UBERON:0001225;9.28e-07;12!UBERON:0008987;9.28e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.89e-73,18;UBERON:0001986,3.89e-73,18;UBERON:0004852,3.89e-73,18;UBERON:0000487,3.91e-59,22;UBERON:0006914,1.43e-51,25;UBERON:0003915,4.86e-41,9;UBERON:0004700,4.86e-41,9;UBERON:0001917,4.86e-41,9;UBERON:0000055,2.74e-29,68;UBERON:0007500,4.06e-25,59;UBERON:0001981,4.06e-25,59;UBERON:0004537,4.06e-25,59;UBERON:0006965,4.06e-25,59;UBERON:0002049,7.02e-25,78;UBERON:0007798,7.02e-25,78;UBERON:0004872,9.02e-21,83;UBERON:0001638,2.46e-19,9;UBERON:0003920,2.46e-19,9;UBERON:0004582,2.46e-19,9;UBERON:0001009,3.03e-19,112;UBERON:0003914,2.55e-18,117;UBERON:0004535,4.08e-18,109;UBERON:0010532,1.38e-11,7;UBERON:0000074,1.38e-11,7;UBERON:0001229,1.38e-11,7;UBERON:0001230,1.38e-11,7;UBERON:0003220,1.38e-11,7;UBERON:0005749,1.38e-11,7;UBERON:0004199,1.38e-11,7;UBERON:0004209,1.38e-11,7;UBERON:0004198,1.38e-11,7;UBERON:0005800,1.39e-10,2;UBERON:0001515,1.39e-10,2;UBERON:0004111,1.97e-10,240;UBERON:0003887,3.44e-10,12;UBERON:0003081,3.69e-10,203;UBERON:0005103,3.79e-10,8;UBERON:0000083,3.79e-10,8;UBERON:0009201,3.79e-10,8;UBERON:0006553,3.79e-10,8;UBERON:0003074,3.79e-10,8;UBERON:0003060,3.79e-10,8;UBERON:0000025,5.55e-10,192;UBERON:0002066,2.06e-09,5;UBERON:0000080,5.01e-09,9;UBERON:0002120,5.01e-09,9;UBERON:0004875,5.01e-09,9;UBERON:0005721,5.01e-09,9;UBERON:0005754,5.01e-09,9;UBERON:0007297,5.01e-09,9;UBERON:0000353,3.65e-08,15;UBERON:0001637,1.33e-07,42;UBERON:0003509,1.33e-07,42;UBERON:0004572,1.33e-07,42;UBERON:0000947,1.45e-07,21;UBERON:0010191,1.45e-07,21;UBERON:0004876,2.16e-07,11;UBERON:0010523,3.02e-07,3;UBERON:0001915,3.02e-07,3;UBERON:0001982,3.02e-07,3;UBERON:0001225,8.89e-07,12;UBERON:0008987,8.89e-07,12 | |||
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|short_description=p@chr1:154475312..154475342,- | |||
}} | }} |
Latest revision as of 22:01, 27 July 2015
Short description: | p@chr1:154475312..154475342, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:154475312..154475342, - |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 5.85e-85 | 36 |
endothelial cell of vascular tree | 1.65e-75 | 24 |
blood vessel endothelial cell | 3.89e-73 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.89e-73 | 18 |
meso-epithelial cell | 8.65e-67 | 45 |
lining cell | 1.71e-50 | 58 |
barrier cell | 1.71e-50 | 58 |
endothelial cell of artery | 4.86e-41 | 9 |
vein endothelial cell | 2.79e-29 | 6 |
aortic endothelial cell | 7.07e-28 | 6 |
squamous epithelial cell | 4.65e-23 | 63 |
mesodermal cell | 4.06e-21 | 121 |
glomerular endothelial cell | 3.52e-16 | 5 |
endothelial cell of umbilical vein | 2.27e-15 | 3 |
glomerular cell | 1.38e-11 | 7 |
kidney corpuscule cell | 1.38e-11 | 7 |
thoracic aorta endothelial cell | 1.39e-10 | 2 |
Merkel cell | 1.61e-10 | 2 |
epithelial cell | 1.29e-09 | 253 |
embryonic cell | 8.22e-09 | 250 |
lymphangioblast | 6.81e-08 | 6 |
endothelial cell of lymphatic vessel | 6.81e-08 | 6 |
vascular lymphangioblast | 6.81e-08 | 6 |
capillary endothelial cell | 3.02e-07 | 3 |
kidney cortical cell | 8.89e-07 | 12 |
renal cortical epithelial cell | 8.89e-07 | 12 |