FFCP PHASE1:Hg19::chr1:211432887..211432903,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:211432887..211432903,+ to FFCP PHASE1:Hg19::chr1:211432887..211432903,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55758 | |EntrezGene=55758 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25594 | |HGNC=25594 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000528408_5end | |||
|cluster_id=chr1:211432887..211432903,+ | |||
|description=CAGE_peak_4_at_RCOR3_5end | |||
|id=chr1:211432887..211432903,+ | |||
|ontology_enrichment_celltype=CL:0000791!9.11e-09!18;CL:0000789!9.11e-09!18;CL:0002420!9.11e-09!18;CL:0002419!9.11e-09!18;CL:0000790!9.11e-09!18;CL:0000084!1.08e-07!25;CL:0000827!1.08e-07!25;CL:0000625!3.23e-07!11;CL:0000838!9.04e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.06e-09;18!CL:0000789;2.06e-09;18!CL:0002419;2.06e-09;18!CL:0000084;1.07e-08;25!CL:0000625;1.09e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.40e-09,18;CL:0000789,2.40e-09,18;CL:0002420,2.40e-09,18;CL:0002419,2.40e-09,18;CL:0000790,2.40e-09,18;CL:0000084,1.79e-08,25;CL:0000827,1.79e-08,25;CL:0000625,1.19e-07,11;CL:0000037,4.14e-07,168;CL:0000738,8.87e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;2.06e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p4@RCOR3 | |||
}} | }} |
Latest revision as of 22:42, 24 September 2015
Short description: | p4@RCOR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RCOR3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000528408_5end |
EntrezGene: | RCOR3 |
HGNC: | 25594 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.40e-09 | 18 |
alpha-beta T cell | 2.40e-09 | 18 |
immature T cell | 2.40e-09 | 18 |
mature T cell | 2.40e-09 | 18 |
immature alpha-beta T cell | 2.40e-09 | 18 |
T cell | 1.79e-08 | 25 |
pro-T cell | 1.79e-08 | 25 |
CD8-positive, alpha-beta T cell | 1.19e-07 | 11 |
hematopoietic stem cell | 4.14e-07 | 168 |
leukocyte | 8.87e-07 | 136 |