FFCP PHASE1:Hg19::chr1:240255198..240255211,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:240255198..240255211,+ to FFCP PHASE1:Hg19::chr1:240255198..240255211,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56776 | |EntrezGene=56776 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14074 | |HGNC=14074 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HBL1,Q9NZ56 | |UniProt=Q9HBL1,Q9NZ56 | ||
|association_with_transcript=13bp_to_NM_020066,uc010pyd.1,uc010pye.1_5end | |||
|cluster_id=chr1:240255198..240255211,+ | |||
|coexpression_cluster_id=C2556 | |||
|description=CAGE_peak_3_at_FMN2_5end | |||
|id=chr1:240255198..240255211,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.90e-17!180;CL:0000057!2.78e-15!75;CL:0002620!5.11e-12!23;CL:0000133!2.77e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.90e-13;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.57e-13,23;CL:0000057,3.83e-07,76 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.50e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.67e-07;5!DOID:450;2.67e-07;5!DOID:66;2.67e-07;5!DOID:423;2.67e-07;5!DOID:0080000;2.67e-07;5!DOID:11722;2.67e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.33e-07,5;DOID:450,2.33e-07,5;DOID:66,2.33e-07,5;DOID:423,2.33e-07,5;DOID:0080000,2.33e-07,5;DOID:11722,2.33e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.61e-43!94;UBERON:0001016!3.61e-43!94;UBERON:0005743!2.46e-42!86;UBERON:0001017!1.99e-40!82;UBERON:0001049!3.00e-40!57;UBERON:0005068!3.00e-40!57;UBERON:0006241!3.00e-40!57;UBERON:0007135!3.00e-40!57;UBERON:0000955!3.45e-38!69;UBERON:0006238!3.45e-38!69;UBERON:0002616!2.70e-35!59;UBERON:0003075!2.24e-33!86;UBERON:0007284!2.24e-33!86;UBERON:0002780!4.63e-31!41;UBERON:0001890!4.63e-31!41;UBERON:0006240!4.63e-31!41;UBERON:0002346!1.49e-30!90;UBERON:0003080!7.26e-30!42;UBERON:0003056!5.63e-27!61;UBERON:0004121!9.99e-27!169;UBERON:0000033!3.09e-26!123;UBERON:0002020!4.21e-26!34;UBERON:0003528!4.21e-26!34;UBERON:0001893!4.93e-26!34;UBERON:0000924!3.32e-25!173;UBERON:0006601!3.32e-25!173;UBERON:0002791!3.67e-25!33;UBERON:0001869!1.59e-24!32;UBERON:0000153!1.63e-23!129;UBERON:0007811!1.63e-23!129;UBERON:0000475!2.14e-19!365;UBERON:0000956!4.71e-19!25;UBERON:0000203!4.71e-19!25;UBERON:0002619!2.01e-18!22;UBERON:0001950!8.59e-17!20;UBERON:0007023!6.04e-14!115;UBERON:0003076!2.78e-11!15;UBERON:0003057!2.78e-11!15;UBERON:0002097!8.21e-10!40;UBERON:0002199!2.10e-09!45;UBERON:0002416!2.10e-09!45;UBERON:0004733!4.73e-09!12;UBERON:0002028!4.73e-09!12;UBERON:0007277!4.73e-09!12;UBERON:0002420!1.35e-08!9;UBERON:0007245!1.35e-08!9;UBERON:0010009!1.35e-08!9;UBERON:0010011!1.35e-08!9;UBERON:0000454!1.35e-08!9;UBERON:0002308!1.70e-08!9;UBERON:0000125!1.70e-08!9;UBERON:0000483!2.35e-08!309;UBERON:0000064!4.54e-08!219;UBERON:0004732!5.21e-08!13;UBERON:0000119!5.78e-08!312;UBERON:0000025!1.19e-07!194;UBERON:0009663!8.54e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;9.24e-34;41!UBERON:0001890;9.24e-34;41!UBERON:0001893;9.94e-33;34!UBERON:0003528;1.67e-32;34!UBERON:0002020;1.67e-32;34!UBERON:0000073;3.76e-32;53!UBERON:0002616;3.76e-32;53!UBERON:0001869;5.36e-32;32!UBERON:0002791;7.83e-32;32!UBERON:0002619;3.27e-31;22!UBERON:0001950;1.96e-28;20!UBERON:0000956;1.09e-26;25!UBERON:0000203;1.09e-26;25!UBERON:0000955;1.56e-22;68!UBERON:0001017;2.42e-22;75!UBERON:0001016;7.77e-21;83!UBERON:0002420;1.04e-13;9!UBERON:0007245;1.04e-13;9!UBERON:0010009;1.04e-13;9!UBERON:0010011;1.04e-13;9!UBERON:0000454;1.04e-13;9!UBERON:0000125;1.50e-13;9!UBERON:0002308;1.50e-13;9!UBERON:0009663;1.30e-10;7!UBERON:0000200;4.94e-10;6!UBERON:0002298;6.04e-10;6!UBERON:0004733;6.83e-10;12!UBERON:0002028;6.83e-10;12!UBERON:0001894;7.16e-10;7!UBERON:0002097;1.32e-09;41!UBERON:0011216;2.99e-09;132!UBERON:0004732;5.92e-09;13!UBERON:0000349;6.14e-09;5!UBERON:0002021;9.11e-09;5!UBERON:0001872;9.62e-09;5!UBERON:0001871;1.17e-08;6!UBERON:0010314;1.24e-07;132!UBERON:0002199;1.29e-07;46!UBERON:0002416;1.29e-07;46!UBERON:0007023;2.72e-07;114!UBERON:0000369;3.51e-07;4!UBERON:0002435;3.51e-07;4!UBERON:0000204;3.51e-07;4!UBERON:0002784;9.21e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.59e-60,56;UBERON:0005068,5.59e-60,56;UBERON:0006241,5.59e-60,56;UBERON:0007135,5.59e-60,56;UBERON:0000073,7.16e-56,53;UBERON:0002616,7.16e-56,53;UBERON:0001017,2.80e-52,81;UBERON:0001016,5.40e-52,89;UBERON:0000955,7.07e-50,68;UBERON:0006238,7.07e-50,68;UBERON:0002780,2.91e-47,41;UBERON:0001890,2.91e-47,41;UBERON:0003080,2.91e-47,41;UBERON:0006240,2.91e-47,41;UBERON:0003075,3.31e-46,82;UBERON:0007284,3.31e-46,82;UBERON:0002346,3.47e-43,86;UBERON:0010371,7.10e-41,104;UBERON:0003528,1.03e-38,34;UBERON:0002020,1.03e-38,34;UBERON:0001893,1.34e-38,34;UBERON:0003056,3.46e-36,61;UBERON:0001869,5.15e-36,32;UBERON:0002791,9.42e-36,32;UBERON:0004121,1.47e-35,171;UBERON:0000924,1.47e-35,171;UBERON:0006601,1.47e-35,171;UBERON:0002619,3.28e-31,22;UBERON:0010314,1.15e-30,132;UBERON:0001950,2.21e-28,20;UBERON:0000956,1.10e-26,25;UBERON:0000203,1.10e-26,25;UBERON:0007023,4.17e-20,114;UBERON:0011216,2.73e-17,223;UBERON:0002420,1.08e-13,9;UBERON:0007245,1.08e-13,9;UBERON:0010009,1.08e-13,9;UBERON:0010011,1.08e-13,9;UBERON:0000454,1.08e-13,9;UBERON:0000125,1.60e-13,9;UBERON:0002308,1.60e-13,9;UBERON:0003076,1.68e-13,15;UBERON:0003057,1.68e-13,15;UBERON:0002097,1.42e-12,41;UBERON:0009663,1.34e-10,7;UBERON:0002199,1.69e-10,46;UBERON:0002416,1.69e-10,46;UBERON:0000200,5.01e-10,6;UBERON:0002298,6.03e-10,6;UBERON:0001894,6.25e-10,7;UBERON:0006222,6.25e-10,7;UBERON:0004733,7.55e-10,12;UBERON:0002028,7.55e-10,12;UBERON:0007277,7.55e-10,12;UBERON:0000349,5.10e-09,5;UBERON:0004732,6.49e-09,13;UBERON:0000025,9.14e-09,192;UBERON:0002021,9.46e-09,5;UBERON:0001872,1.01e-08,5;UBERON:0001871,1.28e-08,6;UBERON:0000369,4.00e-07,4;UBERON:0002435,4.00e-07,4;UBERON:0000204,4.00e-07,4;UBERON:0010082,4.00e-07,4;UBERON:0002784,7.96e-07,4;UBERON:0004111,9.56e-07,240 | |||
|phase1_expression=0.726713517082227,0.642301571672949,0.563817616383885,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0.495065411840187,0,0,0,0.730310090387373,0,0.246242116153576,0.816002764977012,0.313454721478088,0.572471974262113,0.821246550437305,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.434539556882471,0,0,0.0945348171640679,0.221729397462564,0,1.76821751921912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.379891534993739,2.38336525463794,0.573673241497627,0.709336764396714,0.560677600142307,0,0,0,0,0,0,0,0.937285727335186,0,0,0.149448680551801,0.704606991862589,0.809364721840658,0.842704840213491,0,0.982674538494144,0,1.18800285728205,2.71993622206413,0,1.43723628363248,0.168336113954066,0.375355559615893,0.554128230968366,3.95079858792754,2.14541457059314,1.20190447125277,0,6.99619579186562,2.13557388818567,1.90738711043606,5.40163972951924,2.26715564324566,5.66809188100384,4.46680455195816,11.1392379279236,3.80004320128675,11.8643873894734,3.40584624976508,2.58633690910099,4.61512470271599,2.31729825923573,3.89989362314122,0,0,0,0.365921118388786,0.265059536642971,0.116193942869518,0.207322110030741,0.252320850875628,0.72995471815166,1.56449532329816,1.92972281457866,2.76269842704961,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0.231860809950154,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,1.20137223137567,0,0,0,0,0.258543431515556,0,0,3.72313363218819,2.08014873822732,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,1.67737398844108,1.14861935834114,2.85273810081437,1.59259437334337,0.61642896765115,0,0,0,0,0,3.81141936333695,1.30139853857622,0,1.00509759200609,0,0,0,0,0.613457458595699,1.00034104211935,0.542530047399471,3.11956292296211,5.88815663030634,2.05013139544115,4.56851518471581,0.300946099727719,0,0,0.664225598535437,1.47495334833363,1.56390506042549,0.195801157462741,0,0,0,0,0,0,0,0.744323423456331,3.52962538562544,1.12264037773229,0.768834895534206,1.02341449813341,0.965123526861645,0,0.462629081407967,0.177561725313127,0.657017248110473,0,0.116210378459959,0,0,0,0.114814448164607,0.910455840033585,0.655622074797121,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.863663664408557,0,0.270946437543853,0.501689773854853,0,0,0,0,0,1.02580050046556,1.96808787419823,1.62689197332152,0,0,0,0,0,0,0.386682873168488,0,0,0.413509717453592,0,0.580066775656914,0.0852266274161009,0,0,0,0,0,0.464845549297286,1.25924938732256,0.6970372701606,0.308033580176089,0.532306030317022,0,0,0,0,0.632758849437452,0.953150969619124,0.511795582622668,0.855877976067841,0.636406495851874,0.78494864019923,0.179872457583315,0.54907405947211,0.353437207037059,0.606547444719948,0,0,0.975267478179181,0,0,0.682499557039929,1.1312434556297,0,0.551365343546124,0,0,1.15755106853338,0,0.202910376962704,0.30982349809975,0.281695602532241,0.430234056612155,0.785992328104969,0,0,0.211107635297664,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.94732882989668,8.44016498463076,0,0,0,0.19924798825107,0.552567831062295,0.503865495708552,0.409074730008619,0,4.3545542272653,0,0,0,0,0,3.33410970433911,6.78532922266653,4.91670920257812,5.98841394003583,0,0,0,0,0,0,0.344743373241465,0,0.694499979733169,7.08593108651071,4.34147179051469,3.05163472634166,8.62518227463552,5.6154047601174,2.85201016300164,0,0,0.0769502585037971,0.455768223388005,0,0,0,0,1.00757352742049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0.296521128680622,0,0.522109747527277,5.66169517037687,0,4.68528891450678,0,0,0,0,0,5.50930970934882,0.189559738885464,0.300646838828985,0.72581733978073,0,0,0,0,0,0,0,0,0,0,2.40780445460263,0.0967563312890851,0,0,0,0,1.80784592624426,0.274083849293502,0.19871461170299,5.69797163602908,0,0,0.426905989478705,0,0,0,0.857974989309823,0,0.124252535565433,0,0.815425236441684,1.46443984837266,0,0,2.40168115483916,4.79168826121976,0,1.71906176567983,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,3.97614844904652,9.39803502169872,0.160753148465019,0.137539436597234,0,0,0,8.99093438538765,0,0.236417121897595,0.314727528809989,0,0,0,0,0,0,1.08599920350743,2.5926644736038,0.979762080328227,2.39460383124975,0,1.70388021785422,0,0,0,7.88626033805458,6.21493228190643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54427271986794,4.51497180137264,10.3908472486395,3.44045517414043,7.4322464529691,6.58221871178665,0.691743174681154,0.124980407962107,0,0,0,1.40500471742064,1.1593682288866,0,0,0,0.757612021100357,0.251567901752575,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0.797525143673985,0.521745061811734,0,0.761610424337591,0,0.363697318405119,0,0,0.796191777397232,0.800055529326307,1.71697852591396,1.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| ||
|short_description=p3@FMN2 | |||
}} | }} |
Latest revision as of 16:50, 16 September 2015
Short description: | p3@FMN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FMN2_5end |
Coexpression cluster: | C2556_Fibroblast_corpus_medulla_gastrointestinal_occipital_temporal_cerebellum |
Association with transcript: | 13bp_to_NM_020066, uc010pyd.1, uc010pye.1_5end |
EntrezGene: | FMN2 |
HGNC: | 14074 |
UniProt: | Q9HBL1Q9NZ56 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.57e-13 | 23 |
fibroblast | 3.83e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.33e-07 | 5 |
myotonic disease | 2.33e-07 | 5 |
muscle tissue disease | 2.33e-07 | 5 |
myopathy | 2.33e-07 | 5 |
muscular disease | 2.33e-07 | 5 |
myotonic dystrophy | 2.33e-07 | 5 |