FFCP PHASE1:Hg19::chr20:45981288..45981299,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:45981288..45981299,+ to FFCP PHASE1:Hg19::chr20:45981288..45981299,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_ENST00000413818,uc002xtj.2_5end | |||
|cluster_id=chr20:45981288..45981299,+ | |||
|description=CAGE_peak_3_at_ENST00000413818_5end,CAGE_peak_3_at_uc002xtj.2_5end | |||
|id=chr20:45981288..45981299,+ | |||
|ontology_enrichment_celltype=CL:0005020!5.03e-07!6;CL:0002138!5.03e-07!6;CL:0005022!5.03e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000575;3.33e-24;2!CL:0000708;8.88e-17;3!CL:0000064;1.74e-16;3!CL:0000067;1.74e-16;3!CL:0005012;1.74e-16;3!CL:0002304;1.74e-16;3!CL:0002549;2.35e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,2.97e-24,2;CL:0000708,1.00e-16,3;CL:0000064,2.04e-16,3;CL:0000067,2.04e-16,3;CL:0005012,2.04e-16,3;CL:0002304,2.04e-16,3;CL:0002549,2.28e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;5.37e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,4.77e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0000119!1.02e-14!312;UBERON:0003075!4.68e-13!86;UBERON:0007284!4.68e-13!86;UBERON:0000483!5.19e-13!309;UBERON:0002346!5.05e-12!90;UBERON:0003056!1.12e-10!61;UBERON:0000033!1.51e-10!123;UBERON:0001801!1.93e-10!14;UBERON:0000153!1.53e-09!129;UBERON:0007811!1.53e-09!129;UBERON:0000970!2.85e-09!20;UBERON:0000477!8.15e-09!286;UBERON:0002104!1.12e-08!21;UBERON:0000019!2.41e-08!19;UBERON:0000047!2.41e-08!19;UBERON:0004088!2.41e-08!19;UBERON:0003072!2.41e-08!19;UBERON:0003071!2.41e-08!19;UBERON:0004128!2.41e-08!19;UBERON:0002616!1.18e-07!59;UBERON:0000020!1.21e-07!23;UBERON:0004121!1.29e-07!169;UBERON:0002049!1.86e-07!79;UBERON:0007798!1.86e-07!79;UBERON:0000955!2.21e-07!69;UBERON:0006238!2.21e-07!69;UBERON:0000025!2.71e-07!194;UBERON:0001456!2.80e-07!21;UBERON:0000488!2.82e-07!4;UBERON:0001032!3.38e-07!24;UBERON:0004456!3.38e-07!24;UBERON:0000924!3.51e-07!173;UBERON:0006601!3.51e-07!173;UBERON:0002203!3.52e-07!6;UBERON:0001768!3.52e-07!6;UBERON:0002200!5.55e-07!11;UBERON:0006876!5.55e-07!11;UBERON:0004111!7.34e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001801;7.43e-21;14!UBERON:0003210;8.88e-17;3!UBERON:0001778;1.74e-16;3!UBERON:0001775;1.74e-16;3!UBERON:0000019;2.27e-15;19!UBERON:0000047;2.27e-15;19!UBERON:0004088;2.27e-15;19!UBERON:0010230;2.27e-15;19!UBERON:0000970;1.34e-14;20!UBERON:0002104;6.64e-14;21!UBERON:0001456;6.64e-14;21!UBERON:0001389;5.37e-13;1!UBERON:0000026;5.37e-13;1!UBERON:0008784;5.37e-13;1!UBERON:0006058;5.37e-13;1!UBERON:0003663;5.37e-13;1!UBERON:0004256;5.37e-13;1!UBERON:0004708;5.37e-13;1!UBERON:0002101;5.37e-13;1!UBERON:0004709;5.37e-13;1!UBERON:0002529;5.37e-13;1!UBERON:0010538;5.37e-13;1!UBERON:0003661;5.37e-13;1!UBERON:0010890;5.37e-13;1!UBERON:0002471;5.37e-13;1!UBERON:0001383;5.37e-13;1!UBERON:0010758;5.37e-13;1!UBERON:0010707;5.37e-13;1!UBERON:0000978;5.37e-13;1!UBERON:0002103;5.37e-13;1!UBERON:0001665;5.37e-13;1!UBERON:0003823;5.37e-13;1!UBERON:0000154;5.37e-13;1!UBERON:0010709;5.37e-13;1!UBERON:0000020;1.08e-12;23!UBERON:0000488;1.31e-12;4!UBERON:0000964;1.31e-12;4!UBERON:0010409;1.31e-12;4!UBERON:0001032;3.68e-12;24!UBERON:0004456;3.68e-12;24!UBERON:0007625;3.08e-10;11!UBERON:0006876;3.08e-10;11!UBERON:0002203;1.04e-08;6!UBERON:0001768;1.04e-08;6!UBERON:0002200;1.04e-08;6!UBERON:0005629;2.35e-07;2!UBERON:0005358;2.35e-07;2!UBERON:0001886;2.35e-07;2!UBERON:0004086;2.35e-07;2!UBERON:0005282;2.35e-07;2!UBERON:0005281;2.35e-07;2!UBERON:0005090;3.92e-07;2!UBERON:0001630;3.92e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001801,7.30e-21,14;UBERON:0003210,1.00e-16,3;UBERON:0001778,2.04e-16,3;UBERON:0001775,2.04e-16,3;UBERON:0000019,1.32e-14,20;UBERON:0000047,1.32e-14,20;UBERON:0010312,1.32e-14,20;UBERON:0004088,1.32e-14,20;UBERON:0010230,1.32e-14,20;UBERON:0003072,1.32e-14,20;UBERON:0004128,1.32e-14,20;UBERON:0003071,1.32e-14,20;UBERON:0000970,6.56e-14,21;UBERON:0002104,6.56e-14,21;UBERON:0001456,2.82e-13,22;UBERON:0005418,6.06e-13,1;UBERON:0001389,6.06e-13,1;UBERON:0000026,6.06e-13,1;UBERON:0008784,6.06e-13,1;UBERON:0006058,6.06e-13,1;UBERON:0003663,6.06e-13,1;UBERON:0004256,6.06e-13,1;UBERON:0004708,6.06e-13,1;UBERON:0002101,6.06e-13,1;UBERON:0004709,6.06e-13,1;UBERON:0002529,6.06e-13,1;UBERON:0010538,6.06e-13,1;UBERON:0003661,6.06e-13,1;UBERON:0010890,6.06e-13,1;UBERON:0002471,6.06e-13,1;UBERON:0001383,6.06e-13,1;UBERON:0004357,6.06e-13,1;UBERON:0004347,6.06e-13,1;UBERON:0005420,6.06e-13,1;UBERON:0005732,6.06e-13,1;UBERON:0010758,6.06e-13,1;UBERON:0010707,6.06e-13,1;UBERON:0000978,6.06e-13,1;UBERON:0002103,6.06e-13,1;UBERON:0001665,6.06e-13,1;UBERON:0003823,6.06e-13,1;UBERON:0000154,6.06e-13,1;UBERON:0010709,6.06e-13,1;UBERON:0005733,6.06e-13,1;UBERON:0005730,6.06e-13,1;UBERON:0000964,1.23e-12,4;UBERON:0010409,1.23e-12,4;UBERON:0004348,1.23e-12,4;UBERON:0005427,1.23e-12,4;UBERON:0000488,1.47e-12,4;UBERON:0000020,3.64e-12,24;UBERON:0001032,3.64e-12,24;UBERON:0004456,3.64e-12,24;UBERON:0007625,3.14e-10,11;UBERON:0006876,3.24e-10,11;UBERON:0005085,2.11e-09,31;UBERON:0002203,1.13e-08,6;UBERON:0001768,1.13e-08,6;UBERON:0002200,1.13e-08,6;UBERON:0005629,2.28e-07,2;UBERON:0005358,2.28e-07,2;UBERON:0001886,2.28e-07,2;UBERON:0004086,2.28e-07,2;UBERON:0005282,2.28e-07,2;UBERON:0005281,2.28e-07,2;UBERON:0005090,4.17e-07,2;UBERON:0001630,4.17e-07,2 | |||
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| ||
|short_description=p3@ENST00000413818,p3@uc002xtj.2 | |||
}} | }} |
Latest revision as of 14:46, 28 July 2015
Short description: | p3@ENST00000413818, p3@uc002xtj.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000413818_5end, CAGE_peak_3_at_uc002xtj.2_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000413818, uc002xtj.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 2.97e-24 | 2 |
leptomeningeal cell | 1.00e-16 | 3 |
ciliated cell | 2.04e-16 | 3 |
ciliated epithelial cell | 2.04e-16 | 3 |
multi-ciliated epithelial cell | 2.04e-16 | 3 |
non-pigmented ciliary epithelial cell | 2.04e-16 | 3 |
fibroblast of choroid plexus | 2.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 4.77e-13 | 1 |