FFCP PHASE1:Hg19::chr22:31688405..31688418,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:31688405..31688418,- to FFCP PHASE1:Hg19::chr22:31688405..31688418,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=113791 | |EntrezGene=113791 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24942 | |HGNC=24942 | ||
|TSSclassifier=strong | |||
|UniProt=D1MEI0 | |UniProt=D1MEI0 | ||
|association_with_transcript=-24bp_to_ENST00000487265_5end | |||
|cluster_id=chr22:31688405..31688418,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_3_at_PIK3IP1_5end | |||
|id=chr22:31688405..31688418,- | |||
|ontology_enrichment_celltype=CL:0000791!1.53e-13!18;CL:0000789!1.53e-13!18;CL:0002420!1.53e-13!18;CL:0002419!1.53e-13!18;CL:0000790!1.53e-13!18;CL:0000838!1.69e-09!52;CL:0000625!2.60e-09!11;CL:0000542!5.36e-09!53;CL:0000051!5.36e-09!53;CL:0000738!4.13e-08!140;CL:0000084!3.33e-07!25;CL:0000827!3.33e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.18e-18;18!CL:0000789;1.18e-18;18!CL:0002419;1.18e-18;18!CL:0000625;1.64e-13;11!CL:0000084;1.68e-11;25!CL:0000542;1.51e-08;53!CL:0000624;2.75e-08;6!CL:0000236;7.26e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.22e-18,18;CL:0000789,1.22e-18,18;CL:0002420,1.22e-18,18;CL:0002419,1.22e-18,18;CL:0000790,1.22e-18,18;CL:0000838,5.39e-14,52;CL:0000542,1.62e-13,53;CL:0000051,1.62e-13,53;CL:0000625,1.68e-13,11;CL:0000084,1.71e-11,25;CL:0000827,1.71e-11,25;CL:0000738,1.36e-08,136;CL:0000624,2.79e-08,6;CL:0000236,2.56e-07,14;CL:0002087,3.63e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000790;1.18e-18;18!CL:0000051;1.51e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.02e-34!115;UBERON:0001049!3.15e-13!57;UBERON:0005068!3.15e-13!57;UBERON:0006241!3.15e-13!57;UBERON:0007135!3.15e-13!57;UBERON:0002616!2.07e-11!59;UBERON:0000955!2.71e-09!69;UBERON:0006238!2.71e-09!69;UBERON:0003080!3.69e-09!42;UBERON:0003075!3.78e-09!86;UBERON:0007284!3.78e-09!86;UBERON:0001893!6.63e-09!34;UBERON:0002780!9.05e-09!41;UBERON:0001890!9.05e-09!41;UBERON:0006240!9.05e-09!41;UBERON:0002346!1.23e-08!90;UBERON:0002020!1.49e-08!34;UBERON:0003528!1.49e-08!34;UBERON:0001017!1.55e-08!82;UBERON:0002791!1.73e-08!33;UBERON:0005743!3.24e-08!86;UBERON:0000153!4.51e-08!129;UBERON:0007811!4.51e-08!129;UBERON:0001869!6.26e-08!32;UBERON:0000178!3.46e-07!15;UBERON:0000179!3.46e-07!15;UBERON:0000463!3.46e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.01e-10;34!UBERON:0000178;7.34e-10;15!UBERON:0000179;7.34e-10;15!UBERON:0000463;7.34e-10;15!UBERON:0007023;1.14e-09;114!UBERON:0002791;1.34e-09;32!UBERON:0001869;1.45e-09;32!UBERON:0003528;3.25e-09;34!UBERON:0002020;3.25e-09;34!UBERON:0002780;1.43e-08;41!UBERON:0001890;1.43e-08;41!UBERON:0000073;1.68e-08;53!UBERON:0002616;1.68e-08;53!UBERON:0002619;2.30e-08;22!UBERON:0001950;2.91e-07;20!UBERON:0000956;7.65e-07;25!UBERON:0000203;7.65e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.34e-36,114;UBERON:0001049,1.15e-15,56;UBERON:0005068,1.15e-15,56;UBERON:0006241,1.15e-15,56;UBERON:0007135,1.15e-15,56;UBERON:0000073,8.13e-14,53;UBERON:0002616,8.13e-14,53;UBERON:0001893,2.42e-12,34;UBERON:0002780,4.75e-11,41;UBERON:0001890,4.75e-11,41;UBERON:0003080,4.75e-11,41;UBERON:0006240,4.75e-11,41;UBERON:0003528,4.93e-11,34;UBERON:0002020,4.93e-11,34;UBERON:0002791,5.99e-11,32;UBERON:0001869,7.24e-11,32;UBERON:0003075,6.02e-10,82;UBERON:0007284,6.02e-10,82;UBERON:0001017,7.73e-10,81;UBERON:0000178,7.82e-10,15;UBERON:0000179,7.82e-10,15;UBERON:0000463,7.82e-10,15;UBERON:0000955,1.01e-09,68;UBERON:0006238,1.01e-09,68;UBERON:0002346,1.61e-09,86;UBERON:0010371,9.92e-09,104;UBERON:0002619,2.08e-08,22;UBERON:0001016,2.22e-08,89;UBERON:0001950,2.96e-07,20;UBERON:0003056,3.92e-07,61;UBERON:0000956,7.03e-07,25;UBERON:0000203,7.03e-07,25 | |||
|phase1_expression=1.2717486548939,0.428201047781966,1.12763523276777,3.00219895059391,2.23480547213644,1.74467704820074,0,0,0.261185628199839,0.491467873003018,0,0.218441372130172,0.263766978228454,0.123766352960047,0.662794751455832,1.34465029290355,0.602694528023977,0,0.487932798790507,0,0.204000691244253,0.626909442956176,0.286235987131057,0,0,0,0,0,4.72037132218685,1.91914699048606,3.40595471295367,0.919421224478927,0,0.369754010166788,0.387336002901508,0.568676929949686,0,3.32397245119126,4.61252229181326,6.94434786290726,3.35873211359887,6.15397965436061,6.18181362322048,0.290796477559129,0,0,0.232429036905685,0,0.619412741790207,0.575384784644301,0,0,0,0.645484683583826,0,0.188242339542605,0.272906150057846,0.224723484445085,0.612167784741805,0,0,0.329851300186716,0.199463657621632,0.852449501065388,0.290209238628584,0.56738522469114,0,0,1.0429658368404,0.217188844705117,0,0,0.632924774881769,1.69004229049553,1.06302149982522,1.04829322754188,0.22465726229299,0.600707571366025,0,0.855038231223746,2.78483348078726,0.91332076882317,1.75996244461323,6.55366333514558,2.66852776159066,2.56038133539904,4.80475184443215,6.8970292794538,3.30522436392431,1.90810750907073,15.3687501659551,9.39579502993502,10.3213771593812,1.32171328579026,5.60508562981536,0,40.7189224135634,39.3010762749165,24.8777813789406,4.34684888015763,50.5179513282065,56.3402888824333,40.9136129656614,2.33961959458865,17.3817485410154,19.0519149341914,14.3526047795458,1.28091319725675,1.8208308658383,3.4531959966772,0.276350017785848,4.05724320029073,45.6722614539146,55.91603307075,49.1316961883391,2.26618685395132,23.7596706033191,27.1465681931278,13.1570239850141,32.4936722610579,27.3455050619696,24.7117531556577,22.7368429807437,23.1655766189497,16.240994451805,19.6525119196534,15.6014319414999,20.9671012953722,19.523134292196,33.164788489161,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0.486634870302636,0,0.665188192387692,0.087834785693126,2.22664428346111,0.728590576585084,1.11235332835329,0,0.174129737299267,0.26591592103773,0.238490624305342,1.14398982156026,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0,0.35576626268671,0.66944122552934,0,0,0.488124115096339,0.367663080345869,0,0.0892997282840798,0,0,0,0,0.183201743930407,2.63560834872127,3.87780264148325,2.18047026071267,0.496971951695318,0.12663051166458,0.662045904066094,1.43418310374407,0.354668382198357,0.560677600142307,0,0,0,0.269421344139376,0.326923806226917,0.302714855289863,0.576175924479999,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.494533858557114,0,0,0,0,0,0,0,0.150238058906597,0.340296549480063,0,1.06778694409284,0,0,0,0,0.37223371266318,0,0.0974370051611986,0,0,0.161646056818812,1.42003837006646,0.10075209822764,0.169560592310488,3.47869535693934,1.09098448236334,0.860413786167011,0,0,0.116193942869518,0.207322110030741,0,0,1.56449532329816,0,1.38134921352481,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,2.94017422771084,0,0,1.18157981336281,1.32438929824395,0.245976877086227,0.514703430895577,0.219500570817251,0,0,0.277765335475589,0,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0.462985512576611,1.14152491340759,0.790204397959275,0,1.47730203652438,0.234004265139238,0.148631162288728,1.87467667973554,2.01578553838631,1.13420077793909,0.0895585227028483,0,0,0,0.792435906119034,2.48793738648926,7.06187771743111,0.88369703398466,0.126995788584338,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0.517086863031111,0,0,0.26593811658487,0,0,0,0.266422179016099,1.14382394926518,0.542621605391443,0,0.325736184293735,0.355391948742546,0.791951872933429,2.41151501647669,1.74306691720059,0.799783929456456,0,0.502257091432126,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0.672510863961164,13.7921532141349,20.9158747613732,16.812937752647,0,0,0,0.167516265334349,0,1.49801404789436,0,0.414415513436035,0.12269149171914,0,0,0,0.356857977594324,0,0.117141414992713,1.50473049863859,6.82222512167955,0,0,0,0.0868836144680828,0.391602314925481,0.343143423810856,17.3685141943225,15.5314224589404,13.6611273988409,0,0,0,0.744323423456331,0.920771839728375,1.12264037773229,1.28139149255701,0.511707249066704,0.482561763430822,2.96836132889982,0,0,0,0,0,0,1.40354529212299,0,0.229628896329213,0,0.524497659837696,0,0,0,0,0.422206515571503,0,0.510281115829547,0,0,0.270946437543853,0,0,0,0,0.438519753291869,0,0,0.656029291399411,0,0.618246069886334,0,0,1.14853107599234,1.95018073810956,0,0.096670718292122,0,0.15350367472613,0,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0.991709492165869,0.576570202095319,1.27612712494584,0.6069466851333,0,1.25924938732256,0,0,0,0.869932992075073,0.37064843820784,0.143124886741991,0,0.632758849437452,0.190630193923825,0,0,0,0,0.179872457583315,0.54907405947211,0.235624804691373,0.202182481573316,0,0.421258456238981,0.48763373908959,0,0,0.272999822815972,0.424216295861138,0,0.551365343546124,0.66343897524122,0,1.73632660280006,1.31178950409327,0.202910376962704,0,0,0,0,0,0,0.422215270595328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| ||
|short_description=p3@PIK3IP1 | |||
}} | }} |
Latest revision as of 20:23, 19 September 2015
Short description: | p3@PIK3IP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PIK3IP1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -24bp_to_ENST00000487265_5end |
EntrezGene: | PIK3IP1 |
HGNC: | 24942 |
UniProt: | D1MEI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.22e-18 | 18 |
alpha-beta T cell | 1.22e-18 | 18 |
immature T cell | 1.22e-18 | 18 |
mature T cell | 1.22e-18 | 18 |
immature alpha-beta T cell | 1.22e-18 | 18 |
lymphoid lineage restricted progenitor cell | 5.39e-14 | 52 |
lymphocyte | 1.62e-13 | 53 |
common lymphoid progenitor | 1.62e-13 | 53 |
CD8-positive, alpha-beta T cell | 1.68e-13 | 11 |
T cell | 1.71e-11 | 25 |
pro-T cell | 1.71e-11 | 25 |
leukocyte | 1.36e-08 | 136 |
CD4-positive, alpha-beta T cell | 2.79e-08 | 6 |
B cell | 2.56e-07 | 14 |
nongranular leukocyte | 3.63e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.34e-36 | 114 |
neural tube | 1.15e-15 | 56 |
neural rod | 1.15e-15 | 56 |
future spinal cord | 1.15e-15 | 56 |
neural keel | 1.15e-15 | 56 |
regional part of nervous system | 8.13e-14 | 53 |
regional part of brain | 8.13e-14 | 53 |
telencephalon | 2.42e-12 | 34 |
regional part of forebrain | 4.75e-11 | 41 |
forebrain | 4.75e-11 | 41 |
anterior neural tube | 4.75e-11 | 41 |
future forebrain | 4.75e-11 | 41 |
brain grey matter | 4.93e-11 | 34 |
gray matter | 4.93e-11 | 34 |
regional part of telencephalon | 5.99e-11 | 32 |
cerebral hemisphere | 7.24e-11 | 32 |
neural plate | 6.02e-10 | 82 |
presumptive neural plate | 6.02e-10 | 82 |
central nervous system | 7.73e-10 | 81 |
blood | 7.82e-10 | 15 |
haemolymphatic fluid | 7.82e-10 | 15 |
organism substance | 7.82e-10 | 15 |
brain | 1.01e-09 | 68 |
future brain | 1.01e-09 | 68 |
neurectoderm | 1.61e-09 | 86 |
ecto-epithelium | 9.92e-09 | 104 |
regional part of cerebral cortex | 2.08e-08 | 22 |
nervous system | 2.22e-08 | 89 |
neocortex | 2.96e-07 | 20 |
pre-chordal neural plate | 3.92e-07 | 61 |
cerebral cortex | 7.03e-07 | 25 |
pallium | 7.03e-07 | 25 |