FFCP PHASE1:Hg19::chr2:175870085..175870133,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:175870085..175870133,- to FFCP PHASE1:Hg19::chr2:175870085..175870133,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1123 | |EntrezGene=1123 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1943 | |HGNC=1943 | ||
|TSSclassifier=strong | |||
|UniProt=B4DV19,P15882 | |UniProt=B4DV19,P15882 | ||
|association_with_transcript=0bp_to_ENST00000409156,ENST00000488080,NM_001025201,NR_038133_5end | |||
|cluster_id=chr2:175870085..175870133,- | |||
|description=CAGE_peak_3_at_CHN1_5end | |||
|id=chr2:175870085..175870133,- | |||
|ontology_enrichment_celltype=CL:0002319!3.11e-09!25;CL:0002139!2.78e-08!24;CL:0000133!4.16e-08!59;CL:0000115!1.36e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0002319;7.98e-10;25!CL:0002139;6.23e-09;24!CL:0000115;1.95e-07;36!CL:0000071;4.07e-07;18!CL:0002321;5.86e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.65e-10,25;CL:0002139,7.30e-09,24;CL:0000115,8.98e-09,36;CL:0000133,8.74e-08,59;CL:0002078,1.55e-07,45;CL:0000071,4.50e-07,18;CL:0002546,4.50e-07,18 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.69e-09;82!CL:0002546;4.07e-07;18 | |||
|ontology_enrichment_disease=DOID:0050687!6.49e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.88e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.76e-38!94;UBERON:0001016!3.76e-38!94;UBERON:0005743!3.20e-35!86;UBERON:0001017!5.89e-34!82;UBERON:0003075!5.38e-28!86;UBERON:0007284!5.38e-28!86;UBERON:0002346!7.20e-28!90;UBERON:0000955!6.08e-27!69;UBERON:0006238!6.08e-27!69;UBERON:0001049!1.62e-26!57;UBERON:0005068!1.62e-26!57;UBERON:0006241!1.62e-26!57;UBERON:0007135!1.62e-26!57;UBERON:0000477!1.42e-24!286;UBERON:0002616!4.01e-24!59;UBERON:0000119!1.67e-23!312;UBERON:0000924!2.77e-23!173;UBERON:0006601!2.77e-23!173;UBERON:0004121!4.98e-23!169;UBERON:0000483!6.33e-23!309;UBERON:0003080!1.97e-22!42;UBERON:0003056!2.55e-22!61;UBERON:0000025!4.48e-22!194;UBERON:0002780!4.54e-22!41;UBERON:0001890!4.54e-22!41;UBERON:0006240!4.54e-22!41;UBERON:0004111!1.41e-21!241;UBERON:0000481!7.03e-21!347;UBERON:0002020!1.40e-19!34;UBERON:0003528!1.40e-19!34;UBERON:0007023!1.90e-19!115;UBERON:0001893!2.12e-19!34;UBERON:0000033!3.79e-19!123;UBERON:0002791!6.33e-19!33;UBERON:0001869!1.19e-18!32;UBERON:0000475!4.01e-18!365;UBERON:0000153!4.62e-18!129;UBERON:0007811!4.62e-18!129;UBERON:0000064!1.17e-16!219;UBERON:0000468!1.88e-16!659;UBERON:0000922!3.99e-15!612;UBERON:0000956!9.15e-15!25;UBERON:0000203!9.15e-15!25;UBERON:0000480!1.22e-14!626;UBERON:0000467!1.97e-14!625;UBERON:0002050!6.28e-13!605;UBERON:0005423!6.28e-13!605;UBERON:0002619!8.52e-13!22;UBERON:0000923!1.25e-12!604;UBERON:0005291!1.25e-12!604;UBERON:0006598!1.25e-12!604;UBERON:0002532!1.25e-12!604;UBERON:0001950!6.88e-12!20;UBERON:0000062!5.53e-08!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.14e-18;32!UBERON:0002791;2.16e-18;32!UBERON:0003528;2.44e-18;34!UBERON:0002020;2.44e-18;34!UBERON:0001893;3.28e-18;34!UBERON:0002780;2.48e-17;41!UBERON:0001890;2.48e-17;41!UBERON:0000956;6.89e-16;25!UBERON:0000203;6.89e-16;25!UBERON:0000073;1.40e-15;53!UBERON:0002616;1.40e-15;53!UBERON:0002619;9.64e-14;22!UBERON:0001016;1.73e-13;83!UBERON:0000955;5.88e-13;68!UBERON:0001017;6.44e-13;75!UBERON:0001950;9.36e-13;20!UBERON:0004638;4.07e-07;18!UBERON:0001986;4.07e-07;18!UBERON:0004852;4.07e-07;18!UBERON:0002420;9.28e-07;9!UBERON:0007245;9.28e-07;9!UBERON:0010009;9.28e-07;9!UBERON:0010011;9.28e-07;9!UBERON:0000454;9.28e-07;9!UBERON:0007023;9.88e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.48e-39,89;UBERON:0001017,4.81e-36,81;UBERON:0000955,1.90e-28,68;UBERON:0006238,1.90e-28,68;UBERON:0001049,2.90e-28,56;UBERON:0005068,2.90e-28,56;UBERON:0006241,2.90e-28,56;UBERON:0007135,2.90e-28,56;UBERON:0002346,3.14e-28,86;UBERON:0003075,3.43e-28,82;UBERON:0007284,3.43e-28,82;UBERON:0000073,1.12e-26,53;UBERON:0002616,1.12e-26,53;UBERON:0011216,1.37e-25,223;UBERON:0003056,1.31e-24,61;UBERON:0002780,7.66e-24,41;UBERON:0001890,7.66e-24,41;UBERON:0003080,7.66e-24,41;UBERON:0006240,7.66e-24,41;UBERON:0004121,1.06e-23,171;UBERON:0000924,1.06e-23,171;UBERON:0006601,1.06e-23,171;UBERON:0010314,1.40e-23,132;UBERON:0003528,3.90e-21,34;UBERON:0002020,3.90e-21,34;UBERON:0007023,4.38e-21,114;UBERON:0001893,6.11e-21,34;UBERON:0002791,3.93e-20,32;UBERON:0001869,3.99e-20,32;UBERON:0010371,5.91e-20,104;UBERON:0000119,3.03e-19,309;UBERON:0000483,1.08e-18,306;UBERON:0000025,1.54e-18,192;UBERON:0004111,6.62e-17,240;UBERON:0000956,6.65e-16,25;UBERON:0000203,6.65e-16,25;UBERON:0002619,9.16e-14,22;UBERON:0000922,8.74e-13,592;UBERON:0001950,8.86e-13,20;UBERON:0005423,9.05e-10,581;UBERON:0000923,5.21e-08,560;UBERON:0010316,5.21e-08,560;UBERON:0005291,5.21e-08,560;UBERON:0006598,5.21e-08,560;UBERON:0010317,5.21e-08,560;UBERON:0002532,5.21e-08,560;UBERON:0002050,8.83e-08,564;UBERON:0004638,4.50e-07,18;UBERON:0001986,4.50e-07,18;UBERON:0004852,4.50e-07,18;UBERON:0002420,8.71e-07,9;UBERON:0007245,8.71e-07,9;UBERON:0010009,8.71e-07,9;UBERON:0010011,8.71e-07,9;UBERON:0000454,8.71e-07,9 | |||
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| ||
|short_description=p3@CHN1 | |||
}} | }} |
Latest revision as of 08:14, 18 September 2015
Short description: | p3@CHN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CHN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000409156, ENST00000488080, NM_001025201, NR_038133_5end |
EntrezGene: | CHN1 |
HGNC: | 1943 |
UniProt: | B4DV19P15882 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.65e-10 | 25 |
endothelial cell of vascular tree | 7.30e-09 | 24 |
endothelial cell | 8.98e-09 | 36 |
neurectodermal cell | 8.74e-08 | 59 |
meso-epithelial cell | 1.55e-07 | 45 |
blood vessel endothelial cell | 4.50e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.50e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.88e-07 | 143 |