FFCP PHASE1:Hg19::chr2:33661480..33661509,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:33661480..33661509,+ to FFCP PHASE1:Hg19::chr2:33661480..33661509,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25780 | |EntrezGene=25780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14545 | |HGNC=14545 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000497723_5end | |||
|cluster_id=chr2:33661480..33661509,+ | |||
|coexpression_cluster_id=C1506 | |||
|description=CAGE_peak_5_at_RASGRP3_5end | |||
|id=chr2:33661480..33661509,+ | |||
|ontology_enrichment_celltype=CL:0002139!9.57e-29!24;CL:0000115!7.44e-21!35;CL:0000071!1.60e-20!18;CL:0002546!1.60e-20!18;CL:0002078!9.87e-15!44;CL:0005020!7.27e-10!6;CL:0002138!7.27e-10!6;CL:0005022!7.27e-10!6;CL:0000213!1.76e-09!57;CL:0000215!1.76e-09!57;CL:1000413!3.33e-09!9;CL:0002543!5.70e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;8.55e-48;24!CL:0000115;4.69e-33;36!CL:0000071;9.50e-32;18!CL:0002078;8.38e-21;45!CL:0002138;4.50e-18;6!CL:0002543;3.68e-16;6!CL:0000213;3.63e-14;58!CL:0000215;3.63e-14;58!CL:1000413;1.74e-10;9!CL:0002144;5.00e-10;3!CL:0002618;2.10e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.34e-48,24;CL:0000115,3.03e-40,36;CL:0000071,4.05e-32,18;CL:0002546,4.05e-32,18;CL:0002078,9.23e-31,45;CL:0000213,2.71e-22,58;CL:0000215,2.71e-22,58;CL:0005020,4.39e-18,6;CL:0002138,4.39e-18,6;CL:0005022,4.39e-18,6;CL:0002543,2.64e-16,6;CL:1000413,1.10e-10,9;CL:0002144,5.12e-10,3;CL:0002618,1.84e-09,3;CL:0000222,2.22e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002546;9.50e-32;18!CL:0005022;4.50e-18;6!UBERON:0004872;2.25e-09;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.92e-43!115;UBERON:0004111!1.58e-28!241;UBERON:0000477!4.11e-26!286;UBERON:0000025!8.04e-23!194;UBERON:0001986!1.60e-20!18;UBERON:0004638!1.60e-20!18;UBERON:0004852!1.60e-20!18;UBERON:0001049!6.29e-18!57;UBERON:0005068!6.29e-18!57;UBERON:0006241!6.29e-18!57;UBERON:0007135!6.29e-18!57;UBERON:0000487!1.10e-15!22;UBERON:0000055!1.36e-15!69;UBERON:0005743!4.33e-15!86;UBERON:0000483!4.81e-15!309;UBERON:0003075!5.77e-15!86;UBERON:0007284!5.77e-15!86;UBERON:0002616!1.19e-14!59;UBERON:0000119!1.23e-14!312;UBERON:0001017!1.64e-14!82;UBERON:0000955!3.09e-14!69;UBERON:0006238!3.09e-14!69;UBERON:0002346!9.78e-14!90;UBERON:0004872!1.54e-13!84;UBERON:0003080!3.72e-13!42;UBERON:0006914!4.22e-13!25;UBERON:0000073!1.74e-12!94;UBERON:0001016!1.74e-12!94;UBERON:0002780!2.54e-12!41;UBERON:0001890!2.54e-12!41;UBERON:0006240!2.54e-12!41;UBERON:0002049!3.57e-12!79;UBERON:0007798!3.57e-12!79;UBERON:0001950!3.66e-12!20;UBERON:0002619!3.98e-12!22;UBERON:0001981!1.46e-11!60;UBERON:0007500!1.46e-11!60;UBERON:0004537!1.46e-11!60;UBERON:0006965!1.46e-11!60;UBERON:0000153!2.77e-11!129;UBERON:0007811!2.77e-11!129;UBERON:0001893!3.02e-11!34;UBERON:0002020!3.74e-11!34;UBERON:0003528!3.74e-11!34;UBERON:0001869!3.84e-11!32;UBERON:0002791!1.82e-10!33;UBERON:0000956!3.84e-10!25;UBERON:0000203!3.84e-10!25;UBERON:0001009!3.86e-10!113;UBERON:0004535!4.14e-10!110;UBERON:0000033!9.04e-10!123;UBERON:0000468!9.84e-10!659;UBERON:0003914!2.20e-09!118;UBERON:0003915!3.33e-09!9;UBERON:0004700!3.33e-09!9;UBERON:0001917!3.33e-09!9;UBERON:0000467!3.39e-09!625;UBERON:0000480!4.04e-09!626;UBERON:0000481!4.28e-09!347;UBERON:0002465!6.88e-09!10;UBERON:0003056!2.41e-08!61;UBERON:0000922!5.24e-08!612;UBERON:0001638!1.78e-07!9;UBERON:0003920!1.78e-07!9;UBERON:0004582!1.78e-07!9;UBERON:0004121!1.89e-07!169;UBERON:0002050!3.38e-07!605;UBERON:0005423!3.38e-07!605;UBERON:0001473!4.86e-07!8;UBERON:0004536!4.86e-07!8;UBERON:0006558!4.86e-07!8;UBERON:0000924!5.54e-07!173;UBERON:0006601!5.54e-07!173;UBERON:0000923!8.26e-07!604;UBERON:0005291!8.26e-07!604;UBERON:0006598!8.26e-07!604;UBERON:0002532!8.26e-07!604;UBERON:0002298!8.78e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;9.50e-32;18!UBERON:0001986;9.50e-32;18!UBERON:0004852;9.50e-32;18!UBERON:0000487;3.14e-25;22!UBERON:0006914;1.03e-21;25!UBERON:0001638;5.47e-14;9!UBERON:0003920;5.47e-14;9!UBERON:0004582;5.47e-14;9!UBERON:0000490;6.31e-14;33!UBERON:0001473;2.49e-13;8!UBERON:0004536;2.49e-13;8!UBERON:0006558;2.49e-13;8!UBERON:0000922;4.78e-12;49!UBERON:0000055;1.22e-11;65!UBERON:0003915;1.74e-10;9!UBERON:0004700;1.74e-10;9!UBERON:0001917;1.74e-10;9!UBERON:0002465;1.75e-10;10!UBERON:0010523;5.00e-10;3!UBERON:0001915;5.00e-10;3!UBERON:0001982;5.00e-10;3!UBERON:0003978;3.73e-08;3!UBERON:0000946;3.73e-08;3!UBERON:0002049;6.38e-08;75!UBERON:0007798;6.38e-08;75!UBERON:0007500;7.78e-07;56!UBERON:0001981;7.78e-07;56!UBERON:0004537;7.78e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,4.05e-32,18;UBERON:0001986,4.05e-32,18;UBERON:0004852,4.05e-32,18;UBERON:0000487,1.58e-25,22;UBERON:0006914,5.65e-22,25;UBERON:0000055,4.34e-21,68;UBERON:0002049,1.88e-17,78;UBERON:0007798,1.88e-17,78;UBERON:0001638,3.51e-14,9;UBERON:0003920,3.51e-14,9;UBERON:0004582,3.51e-14,9;UBERON:0004872,6.47e-14,83;UBERON:0004111,1.38e-13,240;UBERON:0007500,1.63e-13,59;UBERON:0001981,1.63e-13,59;UBERON:0004537,1.63e-13,59;UBERON:0006965,1.63e-13,59;UBERON:0001473,2.44e-13,8;UBERON:0004536,2.44e-13,8;UBERON:0006558,2.44e-13,8;UBERON:0004535,1.27e-12,109;UBERON:0001009,4.35e-12,112;UBERON:0003914,1.05e-10,117;UBERON:0003915,1.10e-10,9;UBERON:0004700,1.10e-10,9;UBERON:0001917,1.10e-10,9;UBERON:0002465,1.72e-10,10;UBERON:0010523,5.12e-10,3;UBERON:0001915,5.12e-10,3;UBERON:0001982,5.12e-10,3;UBERON:0000025,5.21e-10,192;UBERON:0003978,5.71e-08,3;UBERON:0009751,5.71e-08,3;UBERON:0000946,5.71e-08,3;UBERON:0002523,5.71e-08,3;UBERON:0005983,5.71e-08,3;UBERON:0002165,5.71e-08,3;UBERON:0002062,5.71e-08,3;UBERON:0007280,5.71e-08,3 | |||
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| ||
|short_description=p5@RASGRP3 | |||
}} | }} |
Latest revision as of 23:51, 16 September 2015
Short description: | p5@RASGRP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RASGRP3_5end |
Coexpression cluster: | C1506_Endothelial_Lymphatic_Hepatic_Renal_breast_heart_thyroid |
Association with transcript: | 0bp_to_ENST00000497723_5end |
EntrezGene: | RASGRP3 |
HGNC: | 14545 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.34e-48 | 24 |
endothelial cell | 3.03e-40 | 36 |
blood vessel endothelial cell | 4.05e-32 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.05e-32 | 18 |
meso-epithelial cell | 9.23e-31 | 45 |
lining cell | 2.71e-22 | 58 |
barrier cell | 2.71e-22 | 58 |
lymphangioblast | 4.39e-18 | 6 |
endothelial cell of lymphatic vessel | 4.39e-18 | 6 |
vascular lymphangioblast | 4.39e-18 | 6 |
vein endothelial cell | 2.64e-16 | 6 |
endothelial cell of artery | 1.10e-10 | 9 |
capillary endothelial cell | 5.12e-10 | 3 |
endothelial cell of umbilical vein | 1.84e-09 | 3 |
mesodermal cell | 2.22e-07 | 121 |