FFCP PHASE1:Hg19::chr3:114865016..114865037,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:114865016..114865037,+ to FFCP PHASE1:Hg19::chr3:114865016..114865037,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:114865016..114865037,+ | |||
|coexpression_cluster_id=C3713 | |||
|description=CAGE_peak_at_chr3:114865016..114865037,+ | |||
|id=chr3:114865016..114865037,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.85e-19!140;CL:0000037!6.42e-14!172;CL:0000566!6.42e-14!172;CL:0000988!7.11e-14!182;CL:0002031!1.65e-12!124;CL:0002087!1.71e-11!119;CL:0002032!3.54e-11!165;CL:0000837!3.54e-11!165;CL:0000134!1.15e-10!358;CL:0000034!3.43e-10!444;CL:0002320!3.70e-10!365;CL:0002393!4.22e-10!9;CL:0002397!4.22e-10!9;CL:0000219!1.24e-09!390;CL:0000048!1.24e-09!430;CL:0000723!2.87e-09!436;CL:0000791!9.90e-09!18;CL:0000789!9.90e-09!18;CL:0002420!9.90e-09!18;CL:0002419!9.90e-09!18;CL:0000790!9.90e-09!18;CL:0000838!4.62e-08!52;CL:0000542!9.68e-08!53;CL:0000051!9.68e-08!53;CL:0000766!1.59e-07!76;CL:0002057!1.72e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002393;3.66e-22;6!CL:0002397;3.66e-22;6!CL:0000784;7.50e-13;3!CL:0000623;7.65e-13;3!CL:0000767;1.00e-12;3!CL:0000094;9.97e-12;8!CL:0000875;2.21e-11;3!CL:0002396;2.21e-11;3!CL:0000624;4.54e-10;6!CL:0000791;3.31e-09;18!CL:0000789;3.31e-09;18!CL:0002419;3.31e-09;18!CL:0000766;4.06e-09;69!CL:0000451;1.11e-08;10!CL:0000081;1.95e-08;11!CL:0001014;2.16e-08;2!CL:0001016;2.16e-08;2!CL:0000097;2.08e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.21e-32,136;CL:0002393,4.38e-32,9;CL:0002397,4.38e-32,9;CL:0000037,2.31e-26,168;CL:0000988,1.50e-24,177;CL:0002031,2.65e-20,120;CL:0002032,7.73e-20,161;CL:0000837,7.73e-20,161;CL:0000766,2.43e-17,72;CL:0002087,1.23e-16,115;CL:0000557,2.51e-13,67;CL:0000623,6.96e-13,3;CL:0000825,6.96e-13,3;CL:0000784,7.24e-13,3;CL:0000767,8.79e-13,3;CL:0000763,2.23e-12,108;CL:0000049,2.23e-12,108;CL:0000094,9.67e-12,8;CL:0000875,1.72e-11,3;CL:0002396,1.72e-11,3;CL:0000034,2.22e-11,441;CL:0000134,2.43e-11,354;CL:0002320,6.31e-11,361;CL:0000839,1.94e-10,66;CL:0000048,2.10e-10,427;CL:0000860,4.09e-10,42;CL:0002057,4.09e-10,42;CL:0000723,4.10e-10,433;CL:0000624,5.07e-10,6;CL:0002009,5.77e-10,61;CL:0000219,1.80e-09,386;CL:0000791,2.89e-09,18;CL:0000789,2.89e-09,18;CL:0002420,2.89e-09,18;CL:0002419,2.89e-09,18;CL:0000790,2.89e-09,18;CL:0000451,1.12e-08,10;CL:0000473,1.54e-08,48;CL:0000234,1.54e-08,48;CL:0000081,1.91e-08,11;CL:0001014,2.25e-08,2;CL:0001016,2.25e-08,2;CL:0000838,8.24e-08,52;CL:0000542,1.29e-07,53;CL:0000051,1.29e-07,53;CL:0002194,1.33e-07,59;CL:0000576,1.33e-07,59;CL:0000040,1.33e-07,59;CL:0000559,1.33e-07,59;CL:0000097,2.11e-07,5;CL:0002028,2.11e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000790;3.31e-09;18!CL:0002057;6.44e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.58e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.24e-13,76;UBERON:0002390,1.02e-12,98;UBERON:0003061,1.02e-12,98;UBERON:0001474,1.47e-11,82;UBERON:0002193,4.51e-11,108;UBERON:0002405,6.11e-11,93;UBERON:0002384,2.31e-10,371;UBERON:0004765,3.75e-10,90;UBERON:0001434,1.02e-08,100 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0.204000691244253,0,0,0,0,0,0.0821005894499457,0.0787107813136792,5.11373559903575,4.60595277716655,3.8704030829019,0,0,0,0.0774672005803016,0.142169232487422,3.81680571135301,3.32397245119126,2.60707781711184,2.60413044859022,0,0,0,0.436194716338694,0.755751887377619,0.242584061187816,0,0,0.309706370895104,0,0.512321413058201,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0,0.639337125799041,0,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0,0,0.434377689410233,0,0,0,2.11255286311942,1.4882300997553,3.77385561915077,2.13424399178341,1.95229960693958,1.44653028027372,1.71007646244749,1.19350006319454,2.37463399894024,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0.574752439954483,0,0,0,1.17447437874188,1.14681968437569,9.25199300053181,5.04457706683382,0.790152254325231,1.180258620683,2.35806457649499,2.46721798799411,0.167186495390678,0.651844533267181,0,0,0,0.294605907474837,0.443067789167242,0.812411591295047,0.128091319725675,0.390178042679635,0.328875809207352,0,0.579606171470105,1.4828656316206,0.802622484269139,0,0.226618685395132,2.29932296161153,1.37450978193052,3.03623630423403,0.318565414324097,0.651083453856419,0,0.602300476311091,0,0,0.236777252044017,0.821127996921047,2.62088766192152,4.54648332831962,1.88271725047639,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0.132957960518865,3.57735936458013,5.14795419702115,6.3147775226026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0.12663051166458,0.264818361626438,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0,0.103325781175765,1.18800285728205,0,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,1.25572744982203,0.213557388818567,0,0.300091096084402,0,0.257640540045629,0.18611685633159,0.337552664482532,0,0,0.0920498986422993,0,0.355009592516614,0,0,0.193260853163297,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.352193736052904,1.24396869324463,3.45887888200707,4.67097003677606,0.063497894292169,0,0,0,0,0,0,0,0.87192013766656,0.07333828582095,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0.542621605391443,0.823240336780769,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,5.51686128565396,4.74380664690938,4.2353201972317,0,0,0,0.167516265334349,0,0.749007023947182,0,1.24324654030811,0,0,0,0,0,0.157702415033935,0,0.300946099727719,0,0,0,0,0,0.195801157462741,0,0.82707210449155,2.15714200818617,1.60091336705167,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0.165018999841176,0,0,0,0,0,0.15350367472613,0,0,0,0.170453254832202,0.0890320356467374,0,0,0.127612712494584,0.10115778085555,0,0,1.3940745403212,0,1.06461206063404,0,0.55597265731176,0.286249773483982,0,0,0,0,0,0.636406495851874,0,0,0,0.235624804691373,0.202182481573316,0,0,0,0,0,0,0,1.13008116620243,1.10273068709225,0,0,0,0,0,0,0.563391205064483,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390776190804081,0.278406173895242,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0.63337622438398,0.19924798825107,0,0,0,0.123084805461069,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0.331737779793674,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0.611030144933625,0.296521128680622,0,0.104421949505455,0,0,0,0,0,0.485560759068186,0,0,0,0.126373159256976,0.901940516486955,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0.171986032471617,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0.160753148465019,0.412618309791701,0,1.349843349309,3.0952078182318,0,0,0.0788057072991982,0,0,0,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0.246277562248017,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0.276697269872462,0,0,0,0,0,0,0,0.467426619694449,0.554805861502613,0.378806010550178,0,0,0.228840068396924,0.151230923763239,0.15543720058278,0.443565449968902,0,0,0,0,0,0,0,0.761610424337591,0,0.545545977607678,0.429642228169954,0,0,0,0.343395705182793,0.673498977531838,0,0,0.428883182749851,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0.974301544196942,0.531459361253452,0,0,0.245772908753719,0,0.19998739585493,0.213383459388282,0,0,0.184105950251841,0,0,0.127894371303652,0.215649622793364,0,0.109209638192014,0,0,0.2478715285180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|short_description=p@chr3:114865016..114865037,+ | |||
}} | }} |
Latest revision as of 14:34, 29 July 2015
Short description: | p@chr3:114865016..114865037, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:114865016..114865037, + |
Coexpression cluster: | C3713_CD34_Basophils_CD133_Natural_CD14_Dendritic_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.24e-13 | 76 |
hematopoietic system | 1.02e-12 | 98 |
blood island | 1.02e-12 | 98 |
bone element | 1.47e-11 | 82 |
hemolymphoid system | 4.51e-11 | 108 |
immune system | 6.11e-11 | 93 |
connective tissue | 2.31e-10 | 371 |
skeletal element | 3.75e-10 | 90 |
skeletal system | 1.02e-08 | 100 |