FFCP PHASE1:Hg19::chr3:124303539..124303551,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:124303539..124303551,+ to FFCP PHASE1:Hg19::chr3:124303539..124303551,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8997 | |EntrezGene=8997 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4814 | |HGNC=4814 | ||
|TSSclassifier=strong | |||
|UniProt=C9J1B4 | |UniProt=C9J1B4 | ||
|association_with_transcript=10bp_to_ENST00000454902_5end | |||
|cluster_id=chr3:124303539..124303551,+ | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_14_at_KALRN_5end | |||
|id=chr3:124303539..124303551,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;3.28e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.16e-20;2!DOID:178;3.28e-11;1!DOID:326;3.28e-11;1!DOID:3978;3.28e-11;1!DOID:3394;3.28e-11;1!DOID:5844;3.28e-11;1!DOID:1287;8.11e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.29e-20,2;DOID:178,2.18e-11,1;DOID:326,2.18e-11,1;DOID:3978,2.18e-11,1;DOID:3394,2.18e-11,1;DOID:5844,2.18e-11,1;DOID:1287,8.53e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.69e-48!115;UBERON:0001049!6.74e-24!57;UBERON:0005068!6.74e-24!57;UBERON:0006241!6.74e-24!57;UBERON:0007135!6.74e-24!57;UBERON:0002780!2.45e-21!41;UBERON:0001890!2.45e-21!41;UBERON:0006240!2.45e-21!41;UBERON:0003080!1.22e-20!42;UBERON:0002616!1.88e-19!59;UBERON:0002791!1.96e-19!33;UBERON:0003075!5.45e-19!86;UBERON:0007284!5.45e-19!86;UBERON:0002020!5.98e-19!34;UBERON:0003528!5.98e-19!34;UBERON:0002346!9.44e-19!90;UBERON:0001893!1.13e-18!34;UBERON:0000955!1.37e-18!69;UBERON:0006238!1.37e-18!69;UBERON:0001017!1.17e-17!82;UBERON:0005743!1.19e-17!86;UBERON:0001869!1.77e-16!32;UBERON:0003056!1.80e-16!61;UBERON:0000073!4.96e-16!94;UBERON:0001016!4.96e-16!94;UBERON:0002619!1.66e-14!22;UBERON:0000956!2.65e-12!25;UBERON:0000203!2.65e-12!25;UBERON:0001950!3.97e-12!20;UBERON:0000153!9.52e-12!129;UBERON:0007811!9.52e-12!129;UBERON:0000033!3.16e-11!123;UBERON:0000924!1.84e-09!173;UBERON:0006601!1.84e-09!173;UBERON:0004121!2.28e-09!169;UBERON:0000481!8.68e-09!347;UBERON:0002308!1.75e-08!9;UBERON:0000125!1.75e-08!9;UBERON:0009663!2.37e-08!7;UBERON:0002420!3.73e-08!9;UBERON:0007245!3.73e-08!9;UBERON:0010009!3.73e-08!9;UBERON:0010011!3.73e-08!9;UBERON:0000454!3.73e-08!9;UBERON:0000062!4.34e-08!511;UBERON:0000064!1.03e-07!219;UBERON:0002021!1.95e-07!5;UBERON:0004111!2.20e-07!241;UBERON:0000025!2.75e-07!194;UBERON:0000477!9.04e-07!286;UBERON:0000369!9.67e-07!4;UBERON:0002435!9.67e-07!4;UBERON:0000204!9.67e-07!4;UBERON:0010082!9.67e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0005090;4.94e-21;2!UBERON:0001630;4.94e-21;2!UBERON:0002426;1.37e-11;1!UBERON:0003831;1.37e-11;1!UBERON:0003898;1.37e-11;1!UBERON:0004830;1.37e-11;1!UBERON:0003830;1.37e-11;1!UBERON:0005175;1.37e-11;1!UBERON:0001774;1.37e-11;1!UBERON:0001103;1.37e-11;1!UBERON:0002038;3.28e-11;1!UBERON:0001389;3.28e-11;1!UBERON:0000026;3.28e-11;1!UBERON:0008784;3.28e-11;1!UBERON:0006058;3.28e-11;1!UBERON:0003663;3.28e-11;1!UBERON:0004256;3.28e-11;1!UBERON:0009661;3.28e-11;1!UBERON:0004708;3.28e-11;1!UBERON:0002101;3.28e-11;1!UBERON:0004709;3.28e-11;1!UBERON:0002950;3.28e-11;1!UBERON:0002529;3.28e-11;1!UBERON:0010538;3.28e-11;1!UBERON:0003661;3.28e-11;1!UBERON:0010890;3.28e-11;1!UBERON:0002471;3.28e-11;1!UBERON:0001383;3.28e-11;1!UBERON:0010758;3.28e-11;1!UBERON:0010707;3.28e-11;1!UBERON:0000978;3.28e-11;1!UBERON:0002103;3.28e-11;1!UBERON:0001665;3.28e-11;1!UBERON:0003823;3.28e-11;1!UBERON:0001891;3.28e-11;1!UBERON:0000154;3.28e-11;1!UBERON:0010709;3.28e-11;1!UBERON:0002108;7.85e-09;4!UBERON:0005409;3.41e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,6.37e-21,2;UBERON:0001630,6.37e-21,2;UBERON:0002426,1.18e-11,1;UBERON:0003831,1.18e-11,1;UBERON:0003898,1.18e-11,1;UBERON:0004830,1.18e-11,1;UBERON:0003830,1.18e-11,1;UBERON:0005175,1.18e-11,1;UBERON:0001774,1.18e-11,1;UBERON:0001103,1.18e-11,1;UBERON:0010084,1.18e-11,1;UBERON:0005418,4.91e-11,1;UBERON:0001389,4.91e-11,1;UBERON:0000026,4.91e-11,1;UBERON:0008784,4.91e-11,1;UBERON:0006058,4.91e-11,1;UBERON:0003663,4.91e-11,1;UBERON:0004256,4.91e-11,1;UBERON:0004708,4.91e-11,1;UBERON:0002101,4.91e-11,1;UBERON:0004709,4.91e-11,1;UBERON:0002529,4.91e-11,1;UBERON:0010538,4.91e-11,1;UBERON:0003661,4.91e-11,1;UBERON:0010890,4.91e-11,1;UBERON:0002471,4.91e-11,1;UBERON:0001383,4.91e-11,1;UBERON:0004357,4.91e-11,1;UBERON:0004347,4.91e-11,1;UBERON:0005420,4.91e-11,1;UBERON:0005732,4.91e-11,1;UBERON:0010758,4.91e-11,1;UBERON:0010707,4.91e-11,1;UBERON:0000978,4.91e-11,1;UBERON:0002103,4.91e-11,1;UBERON:0001665,4.91e-11,1;UBERON:0003823,4.91e-11,1;UBERON:0000154,4.91e-11,1;UBERON:0010709,4.91e-11,1;UBERON:0005733,4.91e-11,1;UBERON:0005730,4.91e-11,1;UBERON:0002038,6.00e-11,1;UBERON:0009661,6.00e-11,1;UBERON:0002950,6.00e-11,1;UBERON:0001891,6.00e-11,1;UBERON:0009616,6.00e-11,1;UBERON:0010286,6.00e-11,1;UBERON:0007023,7.65e-09,114;UBERON:0002108,8.50e-09,4 | |||
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| ||
|short_description=p14@KALRN | |||
}} | }} |
Latest revision as of 02:32, 20 September 2015
Short description: | p14@KALRN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_KALRN_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 10bp_to_ENST00000454902_5end |
EntrezGene: | KALRN |
HGNC: | 4814 |
UniProt: | C9J1B4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 1.29e-20 | 2 |
vascular disease | 2.18e-11 | 1 |
ischemia | 2.18e-11 | 1 |
extrinsic cardiomyopathy | 2.18e-11 | 1 |
myocardial ischemia | 2.18e-11 | 1 |
myocardial infarction | 2.18e-11 | 1 |
cardiovascular system disease | 8.53e-11 | 4 |