FFCP PHASE1:Hg19::chr3:147129975..147129992,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:147129975..147129992,+ to FFCP PHASE1:Hg19::chr3:147129975..147129992,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:147129975..147129992,+ | |||
|coexpression_cluster_id=C711 | |||
|description=CAGE_peak_at_chr3:147129975..147129992,+ | |||
|id=chr3:147129975..147129992,+ | |||
|ontology_enrichment_celltype=CL:0000064!5.04e-08!3;CL:0005012!5.04e-08!3;CL:0000067!5.04e-08!3;CL:0002304!5.04e-08!3;CL:0002603!1.54e-07!3;CL:0000708!2.55e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000064;7.78e-15;3!CL:0000067;7.78e-15;3!CL:0005012;7.78e-15;3!CL:0002304;7.78e-15;3!CL:0002575;6.24e-11;2!CL:0002549;2.48e-10;2!CL:0000047;3.59e-10;2!CL:0002603;3.71e-07;3!CL:0000346;4.74e-07;3!CL:1000428;4.74e-07;3!CL:0000708;8.54e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,6.62e-15,3;CL:0000067,6.62e-15,3;CL:0005012,6.62e-15,3;CL:0002304,6.62e-15,3;CL:0002575,6.10e-11,2;CL:0002549,2.01e-10,2;CL:0000346,4.26e-07,3;CL:1000428,4.26e-07,3;CL:0002603,4.53e-07,3;CL:0000133,5.82e-07,59;CL:0000708,9.34e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.59e-16;3!UBERON:0006241;8.54e-07;3!UBERON:0003057;8.54e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.78e-58!82;UBERON:0005743!1.84e-57!86;UBERON:0000073!3.50e-55!94;UBERON:0001016!3.50e-55!94;UBERON:0002616!9.59e-52!59;UBERON:0000955!1.72e-51!69;UBERON:0006238!1.72e-51!69;UBERON:0001049!1.04e-50!57;UBERON:0005068!1.04e-50!57;UBERON:0006241!1.04e-50!57;UBERON:0007135!1.04e-50!57;UBERON:0003075!6.02e-49!86;UBERON:0007284!6.02e-49!86;UBERON:0002346!3.84e-46!90;UBERON:0004121!2.04e-38!169;UBERON:0000924!3.94e-37!173;UBERON:0006601!3.94e-37!173;UBERON:0000033!5.83e-36!123;UBERON:0000153!1.32e-33!129;UBERON:0007811!1.32e-33!129;UBERON:0003056!1.87e-29!61;UBERON:0002780!9.64e-28!41;UBERON:0001890!9.64e-28!41;UBERON:0006240!9.64e-28!41;UBERON:0003076!1.11e-27!15;UBERON:0003057!1.11e-27!15;UBERON:0003080!6.48e-27!42;UBERON:0004732!7.79e-24!13;UBERON:0004733!6.84e-22!12;UBERON:0002028!6.84e-22!12;UBERON:0007277!6.84e-22!12;UBERON:0007023!1.15e-20!115;UBERON:0001893!3.02e-19!34;UBERON:0002791!7.41e-18!33;UBERON:0002020!4.91e-17!34;UBERON:0003528!4.91e-17!34;UBERON:0001869!1.61e-16!32;UBERON:0002680!7.42e-16!9;UBERON:0001895!7.42e-16!9;UBERON:0010092!7.42e-16!9;UBERON:0002037!2.76e-14!6;UBERON:0006215!2.76e-14!6;UBERON:0000119!2.78e-14!312;UBERON:0000475!2.53e-13!365;UBERON:0002200!1.10e-12!11;UBERON:0006876!1.10e-12!11;UBERON:0000483!2.21e-12!309;UBERON:0001894!4.39e-11!7;UBERON:0006222!4.39e-11!7;UBERON:0005174!9.33e-11!5;UBERON:0001137!9.33e-11!5;UBERON:0002308!3.55e-10!9;UBERON:0000125!3.55e-10!9;UBERON:0009663!5.84e-10!7;UBERON:0000488!6.18e-10!4;UBERON:0002298!1.53e-09!8;UBERON:0000956!1.56e-09!25;UBERON:0000203!1.56e-09!25;UBERON:0002619!1.86e-09!22;UBERON:0000025!1.95e-08!194;UBERON:0000477!3.71e-08!286;UBERON:0001778!5.04e-08!3;UBERON:0001775!5.04e-08!3;UBERON:0005284!7.44e-08!5;UBERON:0001896!9.06e-08!3;UBERON:0005290!9.06e-08!3;UBERON:0010096!9.06e-08!3;UBERON:0002420!1.40e-07!9;UBERON:0007245!1.40e-07!9;UBERON:0010009!1.40e-07!9;UBERON:0010011!1.40e-07!9;UBERON:0000454!1.40e-07!9;UBERON:0002240!1.88e-07!3;UBERON:0007625!2.51e-07!11;UBERON:0003210!2.55e-07!3;UBERON:0001950!3.20e-07!20;UBERON:0002104!3.88e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004732;3.13e-34;13!UBERON:0004733;2.21e-30;12!UBERON:0002028;2.21e-30;12!UBERON:0002037;3.21e-20;6!UBERON:0006876;5.53e-20;11!UBERON:0002680;6.09e-19;9!UBERON:0001895;6.09e-19;9!UBERON:0000488;7.54e-19;4!UBERON:0001016;4.04e-16;83!UBERON:0001017;4.29e-16;75!UBERON:0007625;7.63e-15;11!UBERON:0001778;7.78e-15;3!UBERON:0001775;7.78e-15;3!UBERON:0001896;4.39e-14;3!UBERON:0005290;4.39e-14;3!UBERON:0000073;1.46e-13;53!UBERON:0002616;1.46e-13;53!UBERON:0000955;9.57e-13;68!UBERON:0002203;1.30e-12;6!UBERON:0001768;1.30e-12;6!UBERON:0002200;1.30e-12;6!UBERON:0002298;2.24e-12;6!UBERON:0001801;1.57e-11;14!UBERON:0002784;4.80e-11;4!UBERON:0001894;1.13e-10;7!UBERON:0005629;2.48e-10;2!UBERON:0005358;2.48e-10;2!UBERON:0001886;2.48e-10;2!UBERON:0004086;2.48e-10;2!UBERON:0005282;2.48e-10;2!UBERON:0005281;2.48e-10;2!UBERON:0001905;4.74e-10;2!UBERON:0002757;4.74e-10;2!UBERON:0010134;4.74e-10;2!UBERON:0005408;4.74e-10;2!UBERON:0001899;4.74e-10;2!UBERON:0002104;5.99e-10;21!UBERON:0005162;8.78e-10;2!UBERON:0000122;8.78e-10;2!UBERON:0005284;4.31e-09;5!UBERON:0001032;1.38e-08;24!UBERON:0004456;1.38e-08;24!UBERON:0000019;2.50e-08;19!UBERON:0000047;2.50e-08;19!UBERON:0004088;2.50e-08;19!UBERON:0010230;2.50e-08;19!UBERON:0010371;2.61e-08;31!UBERON:0000970;7.01e-08;20!UBERON:0001456;1.78e-07;21!UBERON:0000412;4.74e-07;3!UBERON:0001992;4.74e-07;3!UBERON:0002240;8.54e-07;3!UBERON:0005174;8.54e-07;3!UBERON:0003210;8.54e-07;3!UBERON:0001137;8.54e-07;3!UBERON:0000020;9.05e-07;23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,1.14e-35,15;UBERON:0003057,1.14e-35,15;UBERON:0004732,2.10e-34,13;UBERON:0001017,4.71e-34,81;UBERON:0001016,1.29e-32,89;UBERON:0003075,2.29e-31,82;UBERON:0007284,2.29e-31,82;UBERON:0004733,1.52e-30,12;UBERON:0002028,1.52e-30,12;UBERON:0007277,1.52e-30,12;UBERON:0002346,1.20e-29,86;UBERON:0010371,6.87e-28,104;UBERON:0004121,9.76e-27,171;UBERON:0000924,9.76e-27,171;UBERON:0006601,9.76e-27,171;UBERON:0000955,1.38e-26,68;UBERON:0006238,1.38e-26,68;UBERON:0001049,1.70e-24,56;UBERON:0005068,1.70e-24,56;UBERON:0006241,1.70e-24,56;UBERON:0007135,1.70e-24,56;UBERON:0010314,1.69e-22,132;UBERON:0000073,1.29e-20,53;UBERON:0002616,1.29e-20,53;UBERON:0002037,4.08e-20,6;UBERON:0006215,4.08e-20,6;UBERON:0006876,5.09e-20,11;UBERON:0002680,6.91e-19,9;UBERON:0001895,6.91e-19,9;UBERON:0010092,6.91e-19,9;UBERON:0000488,7.57e-19,4;UBERON:0001778,6.62e-15,3;UBERON:0001775,6.62e-15,3;UBERON:0007625,7.11e-15,11;UBERON:0001896,2.21e-14,3;UBERON:0005290,2.21e-14,3;UBERON:0010096,2.21e-14,3;UBERON:0003056,4.55e-13,61;UBERON:0002203,1.31e-12,6;UBERON:0001768,1.31e-12,6;UBERON:0002200,1.31e-12,6;UBERON:0002298,1.35e-12,6;UBERON:0001801,1.49e-11,14;UBERON:0002784,5.71e-11,4;UBERON:0005085,1.44e-10,31;UBERON:0001894,1.48e-10,7;UBERON:0006222,1.48e-10,7;UBERON:0000019,1.62e-10,20;UBERON:0000047,1.62e-10,20;UBERON:0010312,1.62e-10,20;UBERON:0004088,1.62e-10,20;UBERON:0010230,1.62e-10,20;UBERON:0003072,1.62e-10,20;UBERON:0004128,1.62e-10,20;UBERON:0003071,1.62e-10,20;UBERON:0005629,2.01e-10,2;UBERON:0005358,2.01e-10,2;UBERON:0001886,2.01e-10,2;UBERON:0004086,2.01e-10,2;UBERON:0005282,2.01e-10,2;UBERON:0005281,2.01e-10,2;UBERON:0000970,5.71e-10,21;UBERON:0002104,5.71e-10,21;UBERON:0001905,5.84e-10,2;UBERON:0002757,5.84e-10,2;UBERON:0010134,5.84e-10,2;UBERON:0005408,5.84e-10,2;UBERON:0001899,5.84e-10,2;UBERON:0005162,7.33e-10,2;UBERON:0000122,7.33e-10,2;UBERON:0001456,1.79e-09,22;UBERON:0011216,1.82e-09,223;UBERON:0005284,3.98e-09,5;UBERON:0000020,1.32e-08,24;UBERON:0001032,1.32e-08,24;UBERON:0004456,1.32e-08,24;UBERON:0000119,4.07e-08,309;UBERON:0007023,8.25e-08,114;UBERON:0000412,4.26e-07,3;UBERON:0001992,4.26e-07,3;UBERON:0002240,7.14e-07,3;UBERON:0005174,7.14e-07,3;UBERON:0001137,7.14e-07,3;UBERON:0000483,8.16e-07,306;UBERON:0003210,9.34e-07,3 | |||
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|short_description=p@chr3:147129975..147129992,+ | |||
}} | }} |
Latest revision as of 16:45, 29 July 2015
Short description: | p@chr3:147129975..147129992, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:147129975..147129992, + |
Coexpression cluster: | C711_cerebellum_Pericytes_Fibroblast_Meningeal_spinal_Astrocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 6.62e-15 | 3 |
ciliated epithelial cell | 6.62e-15 | 3 |
multi-ciliated epithelial cell | 6.62e-15 | 3 |
non-pigmented ciliary epithelial cell | 6.62e-15 | 3 |
central nervous system pericyte | 6.10e-11 | 2 |
fibroblast of choroid plexus | 2.01e-10 | 2 |
hair follicle dermal papilla cell | 4.26e-07 | 3 |
stem cell of epidermis | 4.26e-07 | 3 |
astrocyte of the cerebellum | 4.53e-07 | 3 |
neurectodermal cell | 5.82e-07 | 59 |
leptomeningeal cell | 9.34e-07 | 3 |