FFCP PHASE1:Hg19::chr3:157828152..157828222,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:157828152..157828222,+ to FFCP PHASE1:Hg19::chr3:157828152..157828222,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51319 | |EntrezGene=51319 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24152 | |HGNC=24152 | ||
|TSSclassifier=strong | |||
|UniProt=C9JVB3 | |UniProt=C9JVB3 | ||
|association_with_transcript=0bp_to_ENST00000476899_5end | |||
|cluster_id=chr3:157828152..157828222,+ | |||
|description=CAGE_peak_2_at_RSRC1_5end | |||
|id=chr3:157828152..157828222,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.02e-09!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.05e-09,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!4.05e-39!239;DOID:162!1.47e-38!235;DOID:0050687!2.52e-27!143;DOID:305!4.76e-21!106;DOID:0050686!2.94e-18!137 | |||
|ontology_enrichment_disease_v019=DOID:0050687;4.71e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,8.86e-38,239;DOID:162,1.62e-37,235;DOID:0050687,2.11e-28,143;DOID:305,2.34e-22,106;DOID:0050686,4.25e-17,137 | |||
|ontology_enrichment_uberon=UBERON:0000955!2.32e-12!69;UBERON:0006238!2.32e-12!69;UBERON:0001049!2.49e-12!57;UBERON:0005068!2.49e-12!57;UBERON:0006241!2.49e-12!57;UBERON:0007135!2.49e-12!57;UBERON:0000073!1.25e-11!94;UBERON:0001016!1.25e-11!94;UBERON:0002616!2.14e-11!59;UBERON:0001017!4.50e-11!82;UBERON:0002780!9.43e-11!41;UBERON:0001890!9.43e-11!41;UBERON:0006240!9.43e-11!41;UBERON:0003080!1.25e-10!42;UBERON:0005743!3.16e-10!86;UBERON:0001869!9.85e-09!32;UBERON:0002020!1.13e-08!34;UBERON:0003528!1.13e-08!34;UBERON:0001893!3.53e-08!34;UBERON:0000033!8.95e-08!123;UBERON:0002791!9.35e-08!33;UBERON:0000924!2.81e-07!173;UBERON:0006601!2.81e-07!173;UBERON:0002346!3.18e-07!90;UBERON:0004121!4.41e-07!169;UBERON:0003075!4.65e-07!86;UBERON:0007284!4.65e-07!86;UBERON:0000153!5.70e-07!129;UBERON:0007811!5.70e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.94e-07;32!UBERON:0002780;2.32e-07;41!UBERON:0001890;2.32e-07;41!UBERON:0003528;2.84e-07;34!UBERON:0002020;2.84e-07;34!UBERON:0002791;5.58e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.37e-12,89;UBERON:0001049,8.85e-12,56;UBERON:0005068,8.85e-12,56;UBERON:0006241,8.85e-12,56;UBERON:0007135,8.85e-12,56;UBERON:0000955,1.94e-11,68;UBERON:0006238,1.94e-11,68;UBERON:0000073,3.26e-11,53;UBERON:0002616,3.26e-11,53;UBERON:0002780,2.23e-10,41;UBERON:0001890,2.23e-10,41;UBERON:0003080,2.23e-10,41;UBERON:0006240,2.23e-10,41;UBERON:0001017,3.02e-10,81;UBERON:0001869,1.89e-08,32;UBERON:0003528,2.08e-08,34;UBERON:0002020,2.08e-08,34;UBERON:0002791,7.07e-08,32;UBERON:0001893,1.04e-07,34;UBERON:0011216,3.40e-07,223 | |||
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| ||
|short_description=p2@RSRC1 | |||
}} | }} |
Latest revision as of 08:22, 16 September 2015
Short description: | p2@RSRC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RSRC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000476899_5end |
EntrezGene: | RSRC1 |
HGNC: | 24152 |
UniProt: | C9JVB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.05e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
nervous system | 7.37e-12 | 89 |
neural tube | 8.85e-12 | 56 |
neural rod | 8.85e-12 | 56 |
future spinal cord | 8.85e-12 | 56 |
neural keel | 8.85e-12 | 56 |
brain | 1.94e-11 | 68 |
future brain | 1.94e-11 | 68 |
regional part of nervous system | 3.26e-11 | 53 |
regional part of brain | 3.26e-11 | 53 |
regional part of forebrain | 2.23e-10 | 41 |
forebrain | 2.23e-10 | 41 |
anterior neural tube | 2.23e-10 | 41 |
future forebrain | 2.23e-10 | 41 |
central nervous system | 3.02e-10 | 81 |
cerebral hemisphere | 1.89e-08 | 32 |
brain grey matter | 2.08e-08 | 34 |
gray matter | 2.08e-08 | 34 |
regional part of telencephalon | 7.07e-08 | 32 |
telencephalon | 1.04e-07 | 34 |
organ system subdivision | 3.40e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 8.86e-38 | 239 |
cancer | 1.62e-37 | 235 |
cell type cancer | 2.11e-28 | 143 |
carcinoma | 2.34e-22 | 106 |
organ system cancer | 4.25e-17 | 137 |