FFCP PHASE1:Hg19::chr3:77088656..77088667,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6092 | |EntrezGene=6092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10250 | |HGNC=10250 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HCK4 | |UniProt=Q9HCK4 | ||
|association_with_transcript=-369bp_to_ENST00000461745_5end | |||
|cluster_id=chr3:77088656..77088667,+ | |||
|coexpression_cluster_id=C112 | |||
|description=CAGE_peak_20_at_ROBO2_5end | |||
|id=chr3:77088656..77088667,+ | |||
|ontology_enrichment_celltype=CL:0000313!2.59e-10!1 | |||
|ontology_enrichment_celltype_v019=CL:0000123;8.10e-26;2!CL:0000242;8.10e-26;2!CL:0000312;3.42e-11;5!CL:0000240;1.50e-09;6!CL:0000311;1.50e-09;6!CL:0000079;1.50e-09;6!CL:0000237;1.50e-09;6!CL:0000362;8.61e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,9.18e-26,2;CL:0000312,3.60e-11,5;CL:0000240,1.57e-09,6;CL:0000311,1.57e-09,6;CL:0000079,1.57e-09,6;CL:0000237,1.57e-09,6;CL:0000036,1.57e-09,6;CL:0000357,1.57e-09,6;CL:0000114,1.57e-09,6;CL:0000362,8.85e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;1.50e-09;6!CL:0000114;1.50e-09;6 | |||
|ontology_enrichment_disease=DOID:5409!6.37e-20!4;DOID:1325!1.22e-11!7;DOID:3904!1.22e-11!7;DOID:2152!2.59e-10!1;DOID:3905!3.60e-09!9 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!1.87e-18!2;UBERON:0002757!1.87e-18!2;UBERON:0010134!1.87e-18!2;UBERON:0002784!1.87e-18!2;UBERON:0005408!1.87e-18!2;UBERON:0001899!1.87e-18!2;UBERON:0004911!2.59e-10!1;UBERON:0003296!1.07e-09!4;UBERON:0010133!1.07e-09!4;UBERON:0002022!1.17e-09!1;UBERON:0002780!1.57e-09!41;UBERON:0001890!1.57e-09!41;UBERON:0006240!1.57e-09!41;UBERON:0003080!2.73e-09!42;UBERON:0001017!6.58e-09!82;UBERON:0001049!1.20e-08!57;UBERON:0005068!1.20e-08!57;UBERON:0006241!1.20e-08!57;UBERON:0007135!1.20e-08!57;UBERON:0005743!1.96e-08!86;UBERON:0000073!1.65e-07!94;UBERON:0001016!1.65e-07!94;UBERON:0001950!6.35e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;2.66e-11;5!UBERON:0010039;2.66e-11;5!UBERON:0001872;2.94e-11;5!UBERON:0002021;3.42e-11;5!UBERON:0001950;1.73e-10;20!UBERON:0002619;1.14e-09;22!UBERON:0000956;1.13e-08;25!UBERON:0000203;1.13e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001872,2.94e-11,5;UBERON:0002021,3.26e-11,5;UBERON:0001950,1.69e-10,20;UBERON:0002619,1.12e-09,22;UBERON:0000956,1.11e-08,25;UBERON:0000203,1.11e-08,25;UBERON:0000945,1.49e-07,8;UBERON:0010039,1.49e-07,8;UBERON:0002791,4.74e-07,32;UBERON:0001869,4.74e-07,32 | |||
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|short_description=p20@ROBO2 | |||
}} | }} |
Latest revision as of 16:06, 19 September 2015
Short description: | p20@ROBO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_ROBO2_5end |
Coexpression cluster: | C112_gastric_pancreas_temporal_duodenum_small_extraskeletal_adrenal |
Association with transcript: | -369bp_to_ENST00000461745_5end |
EntrezGene: | ROBO2 |
HGNC: | 10250 |
UniProt: | Q9HCK4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 9.18e-26 | 2 |
keratinocyte | 3.60e-11 | 5 |
stratified squamous epithelial cell | 1.57e-09 | 6 |
keratin accumulating cell | 1.57e-09 | 6 |
stratified epithelial cell | 1.57e-09 | 6 |
keratinizing barrier epithelial cell | 1.57e-09 | 6 |
epithelial fate stem cell | 1.57e-09 | 6 |
stratified epithelial stem cell | 1.57e-09 | 6 |
surface ectodermal cell | 1.57e-09 | 6 |
epidermal cell | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
parietal lobe | 2.94e-11 | 5 |
occipital lobe | 3.26e-11 | 5 |
neocortex | 1.69e-10 | 20 |
regional part of cerebral cortex | 1.12e-09 | 22 |
cerebral cortex | 1.11e-08 | 25 |
pallium | 1.11e-08 | 25 |
stomach | 1.49e-07 | 8 |
food storage organ | 1.49e-07 | 8 |
regional part of telencephalon | 4.74e-07 | 32 |
cerebral hemisphere | 4.74e-07 | 32 |