FFCP PHASE1:Hg19::chr5:151042369..151042376,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:151042369..151042376,- to FFCP PHASE1:Hg19::chr5:151042369..151042376,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:151042369..151042376,- | |||
|description=CAGE_peak_at_chr5:151042369..151042376,- | |||
|id=chr5:151042369..151042376,- | |||
|ontology_enrichment_celltype=CL:0000055!7.99e-12!180;CL:0000327!3.67e-08!14;CL:0000222!2.10e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000327;1.73e-09;15!CL:0000138;2.28e-09;6!CL:0000632;1.49e-08;3!CL:0002579;1.49e-08;3!CL:0000151;1.01e-07;36!CL:0000511;4.97e-07;1!CL:0002625;4.97e-07;1!CL:0000216;4.97e-07;1!CL:0000499;5.66e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000327,2.21e-09,15;CL:0000058,3.04e-09,6;CL:0000138,3.04e-09,6;CL:0000632,1.68e-08,3;CL:0002579,1.81e-08,3;CL:0000511,3.01e-07,1;CL:0002625,3.01e-07,1;CL:0000216,3.01e-07,1;CL:0000151,6.18e-07,36;CL:0000499,6.72e-07,28 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.54e-07;1!UBERON:0003099;4.97e-07;1!UBERON:0003852;4.97e-07;1!UBERON:0005062;8.06e-07;4!UBERON:0007284;8.06e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1192;7.90e-09;3!DOID:3369;1.85e-07;1!DOID:3571;4.97e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,7.48e-09,3;DOID:3369,1.65e-07,1;DOID:3571,8.18e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;4.07e-09;6!UBERON:0002358;4.07e-09;6!UBERON:0003684;4.07e-09;6!UBERON:0001178;4.07e-09;6!UBERON:0002135;1.85e-07;1!UBERON:0007029;4.97e-07;1!UBERON:0001136;4.97e-07;1!UBERON:0001343;4.97e-07;1!UBERON:0005705;4.97e-07;1!UBERON:0008193;4.97e-07;1!UBERON:0010912;4.97e-07;1!UBERON:0002514;4.97e-07;1!UBERON:0003457;4.97e-07;1!UBERON:0008907;4.97e-07;1!UBERON:0008001;4.97e-07;1!UBERON:0007213;4.97e-07;1!UBERON:0009891;4.97e-07;1!UBERON:0007914;4.97e-07;1!UBERON:0004910;4.97e-07;1!UBERON:0007375;4.97e-07;1!UBERON:0003323;4.97e-07;1!UBERON:0010258;4.97e-07;1!UBERON:0005253;4.97e-07;1!UBERON:0007842;4.97e-07;1!UBERON:0004813;4.97e-07;1!UBERON:0002397;4.97e-07;1!UBERON:0003113;4.97e-07;1!UBERON:0003277;4.97e-07;1!UBERON:0001709;4.97e-07;1!UBERON:0002244;4.97e-07;1!UBERON:0005620;4.97e-07;1!UBERON:0010364;4.97e-07;1!UBERON:0004288;4.97e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.31e-09,6;UBERON:0002358,3.31e-09,6;UBERON:0003684,3.31e-09,6;UBERON:0001178,3.31e-09,6;UBERON:0002135,1.98e-07,1;UBERON:0007029,2.23e-07,1;UBERON:0005705,2.52e-07,1;UBERON:0008193,2.52e-07,1;UBERON:0010912,2.52e-07,1;UBERON:0002514,2.52e-07,1;UBERON:0003457,2.52e-07,1;UBERON:0008907,2.52e-07,1;UBERON:0008001,2.52e-07,1;UBERON:0007213,2.52e-07,1;UBERON:0009891,2.52e-07,1;UBERON:0007914,2.52e-07,1;UBERON:0009292,2.52e-07,1;UBERON:0003099,2.52e-07,1;UBERON:0007375,2.52e-07,1;UBERON:0003323,2.52e-07,1;UBERON:0010258,2.52e-07,1;UBERON:0007842,2.52e-07,1;UBERON:0009494,2.52e-07,1;UBERON:0010042,2.52e-07,1;UBERON:0010045,2.52e-07,1;UBERON:0010259,2.52e-07,1;UBERON:0010359,2.52e-07,1;UBERON:0009526,2.52e-07,1;UBERON:0002397,2.52e-07,1;UBERON:0003113,2.52e-07,1;UBERON:0003277,2.52e-07,1;UBERON:0001709,2.52e-07,1;UBERON:0004066,2.52e-07,1;UBERON:0002244,2.52e-07,1;UBERON:0005620,2.52e-07,1;UBERON:0004362,2.52e-07,1;UBERON:0010364,2.52e-07,1;UBERON:0010046,2.52e-07,1;UBERON:0005868,2.52e-07,1;UBERON:0007238,2.52e-07,1;UBERON:0004288,2.52e-07,1;UBERON:0004068,2.52e-07,1;UBERON:0010334,2.52e-07,1;UBERON:0003852,2.52e-07,1;UBERON:0010253,2.52e-07,1;UBERON:0001136,3.01e-07,1;UBERON:0001343,3.01e-07,1;UBERON:0004910,3.01e-07,1;UBERON:0005154,3.01e-07,1;UBERON:0005295,3.01e-07,1;UBERON:0004813,3.01e-07,1;UBERON:0005297,3.01e-07,1;UBERON:0005294,3.01e-07,1;UBERON:0010141,3.01e-07,1;UBERON:0005891,3.01e-07,1 | |||
|phase1_expression=1.2717486548939,0.428201047781966,0.845726424575827,0,1.78784437770915,0,0,0,0,0,0,0.436882744260345,0.791300934685361,0,0,0,1.20538905604795,0.730310090387373,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0.722878304769133,1.00267582127178,0.434539556882471,11.9292892057665,1.45990461090791,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0,0,0,0,0.71153252537342,0.33472061276467,0,0,0,0,0.81014194788176,0,0.22452937262617,0,1.53316637465883,0,0.183201743930407,0,0,0,2.98183171017191,0.25326102332916,0.264818361626438,0.573673241497627,0.354668382198357,0.560677600142307,0,0,0.311211035399766,0,0.653847612453835,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0.247266929278557,0.910161361938026,0,0,0.125118519871964,0,0,0.612975591598039,0,0.226864366320042,0.717558542755448,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0.37223371266318,0.337552664482532,0,0,0.0920498986422993,0.161646056818812,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,1.17408694235822,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0.646358578788889,0,0.845302752556,0.26593811658487,0,0.257207374262142,0,0,0.428933980974443,1.62786481617433,0,0,0,0,0.602878754119172,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0.434343920002738,0.410952645100767,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,1.03985430765404,0.535286966391485,0.630809660135739,0.819989904948992,1.20378439891088,2.27407504055985,0,0,0.184369168541703,0.260650843404249,0,0.343143423810856,0,0,0,0,1.66435439510497,0.907170879989041,0.992431231275107,0.920771839728375,1.40330047216537,1.40953064181271,0,1.12597744800525,0,0,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.206082023295445,0,0,0,0,1.6068392984416,0,0,0,0.137836572484531,0.214840489736547,0.290033387828457,0,0.445160178233687,0,0,0,0,0,0.94443704049192,0,0,1.06461206063404,0,0.18532421910392,0.429374660225974,0,0.632758849437452,0.571890581771475,0.255897791311334,0.855877976067841,0,0,0.359744915166629,0,0.117812402345686,1.01091240786658,0,0,0.48763373908959,0,0,0.818999468447914,0,0,0.551365343546124,0.66343897524122,0,0.578775534266688,0,0.202910376962704,0,0.563391205064483,0,0.196498082026242,0,0,0.844430541190656,0.658589785919804,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0.562677665642051,0,0,0,0,0,0,0.102268682502155,0,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0.802577647298789,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0.67952103036807,0.732219924186332,0.101998217636322,0,0.600420288709789,0.273810757783986,0,0.429765441419957,0,2.23425921017803,0.229160424011684,0,0.199679000498991,0,0.223171457441873,0,1.08089965062721,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0.653174720218818,0,0,0.511164065356265,0.113312091520126,0,0,0.517131825446202,0.39669780522807,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0.2506898940227,0.612691153526923,0,0,0,0.122026264901963,0,0.573409195690071,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0,0,0.233713309847224,0.554805861502613,0.189403005275089,0.251567901752575,0.889811221596536,0,0.151230923763239,0,0.295710299979268,0.318593534327405,0,0.310525913752519,0,0.265841714557995,0,0.901545653983311,0.761610424337591,0.406870733204662,0,0.322231671127465,0,0.796191777397232,0.400027764663154,0.343395705182793,0,0,0.57785949122191,0.214441591374926,0,0.453411851024545,0,0.489473409012935,0.71635536432595,0.308801447160972,0,0.176689145945881,0.192914038270915,0.337884881306145,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0.247871528518004,0,1.27201740261367,0,0,1.76337971845342,0.3062454773532,0,0,0,0,0,0,0.322951291263702,0,0,0,0,0,1.1441462864015,0,0,0.0752103283492573,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0.336283722218824,0,0,0,0,0.342976018874837,0.203909198930495,0.0657727735628491,0,0,0.156986185701028,0,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0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| ||
|short_description=p@chr5:151042369..151042376,- | |||
}} | }} |
Latest revision as of 11:56, 30 July 2015
Short description: | p@chr5:151042369..151042376, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:151042369..151042376, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extracellular matrix secreting cell | 2.21e-09 | 15 |
chondroblast | 3.04e-09 | 6 |
chondrocyte | 3.04e-09 | 6 |
hepatic stellate cell | 1.68e-08 | 3 |
omentum preadipocyte | 1.81e-08 | 3 |
androgen binding protein secreting cell | 3.01e-07 | 1 |
seminiferous tubule epithelial cell | 3.01e-07 | 1 |
Sertoli cell | 3.01e-07 | 1 |
secretory cell | 6.18e-07 | 36 |
stromal cell | 6.72e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 7.48e-09 | 3 |
peripheral primitive neuroectodermal tumor | 1.65e-07 | 1 |
liver cancer | 8.18e-07 | 1 |