FFCP PHASE1:Hg19::chr5:176831490..176831528,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:176831490..176831528,- to FFCP PHASE1:Hg19::chr5:176831490..176831528,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2161 | |EntrezGene=2161 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3530 | |HGNC=3530 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-17bp_to_ENST00000502854,ENST00000510358,uc003mgn.3,uc011dfy.1_5end | |||
|cluster_id=chr5:176831490..176831528,- | |||
|description=CAGE_peak_2_at_F12_5end | |||
|id=chr5:176831490..176831528,- | |||
|ontology_enrichment_celltype=CL:0000066!4.43e-32!254;CL:0002076!3.00e-11!43;CL:0000076!1.68e-09!62;CL:0002321!1.61e-08!248;CL:0000220!1.76e-08!246;CL:0000223!3.97e-08!59;CL:0002251!4.30e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.73e-09;42!CL:0002368;4.43e-09;13!CL:0002202;2.14e-07;9!CL:0002632;2.14e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.49e-23,253;CL:0002076,8.72e-12,42;CL:0000223,2.73e-09,58;CL:0002368,1.23e-08,13;CL:0002202,2.97e-07,9;CL:0002632,2.97e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!7.63e-27!239;DOID:162!1.95e-26!235;DOID:0050687!2.28e-18!143;DOID:305!4.68e-15!106;DOID:0050686!5.31e-12!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.21e-19,235;DOID:14566,1.20e-18,239;DOID:0050687,8.67e-16,143;DOID:305,3.30e-13,106;DOID:0050686,2.31e-10,137 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.93e-09!169;UBERON:0000925!1.93e-09!169;UBERON:0006595!1.93e-09!169;UBERON:0001007!5.59e-07!155;UBERON:0001555!5.59e-07!155;UBERON:0007026!5.59e-07!155;UBERON:0000077!5.84e-07!130;UBERON:0004921!5.84e-07!129;UBERON:0004185!5.84e-07!129;UBERON:0003104!7.73e-07!238;UBERON:0009142!7.73e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0004807;2.02e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.20e-08,101;UBERON:0005153,1.29e-08,37;UBERON:0006554,7.36e-07,47 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.491467873003018,3.48900583986214,1.09220686065086,1.31883489114227,0.247532705920093,0.331397375727916,0.672325146451775,1.20538905604795,0.730310090387373,0.975865597581014,0.123121058076788,0,0,0,0.136874425072884,0,3.43860325865781,3.03772180964799,2.91229890860613,0,0,0,2.75826367343678,1.204823675113,1.84877005083394,0,0.853015394924529,0.293600439334847,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0,1.23350366406548,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0.276350017785848,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0.144846518960824,0,0.486634870302636,0,0.221729397462564,0.087834785693126,0.196468613246569,1.45718115317017,0.741568885568859,0,0,0,0.238490624305342,0.571994910780128,0,0.596287222100115,1.72046919021225,1.04142150482278,0,1.25849830862972,3.30141650328081,0.835979866147242,0.258416759169329,0.35576626268671,0,0,3.04108842287405,0.732186172644509,0.735326160691737,2.43042584364528,0.357198913136319,0.898117490504679,0.563057402416611,0,0.949265659568129,0.732806975721629,0,0,3.05265836499774,0,0.506522046658319,0,0,0,0.560677600142307,2.1349799145941,2.71334303258876,0.622422070799533,0.269421344139376,0.326923806226917,0.302714855289863,0,0.937285727335186,1.5608003841516,0.570471821544449,0.747243402759005,0.352303495931295,0.323745888736263,0.140450806702248,0.408308342509787,0.368502951935304,0.206651562351531,0,0,0,1.43723628363248,0,0.250237039743928,0.277064115484183,0.438977620880838,0,0,0.680593098960126,0,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0,0,0.292311015483596,0.504867548488229,0.0920498986422993,0,0,0.201504196455281,0.169560592310488,1.73934767846967,1.09098448236334,1.14721838155602,0.609868530647977,0.132529768321485,0.929551542956147,0.621966330092223,0,0,0,0.643240938192885,0,0,0.721879481669586,0.828147600278907,0.505754070234305,0.482022059766964,0.55146986366197,0.653638332277218,1.18635309555548,1.07865046528132,0.392442930250692,0.38474715694639,0,0,1.2347220339942,0,0,0,0,0,0.860919069801795,0.171567810298526,1.53650399572076,2.24803506515239,0.603173834469785,1.20364978706088,0.651616610620649,0,0,0.115930404975077,0.352226082707465,0,0.462985512576611,0.380508304469197,3.95102198979638,0,0,0,0,0.93733833986777,0.671928512795438,1.13420077793909,1.25381931783988,1.16253575405585,3.83382679165211,0,0,0.207328115540772,0,0.6312121671319,0.190493682876507,0,0,1.71072446022705,0.308482478109971,1.20137223137567,0.571652865261156,0,0,0,0.517086863031111,0,0,0.26593811658487,0,0.514414748524284,0,0.266422179016099,0,0.542621605391443,0,0.325736184293735,0,0.791951872933429,0.301439377059586,0.871533458600294,0.199945982364114,0,0,0,0.239624855491583,0,0,0.579125226670317,1.02738161275192,0,1.2329365839288,0,0.215627574859517,0,0,0,0,0.837581326671744,0,0,0,0,0,0.500170521059677,0.542530047399471,1.03985430765404,0.713715955188647,0.315404830067869,0.468565659970853,0,0,0,0,0.553107505625109,0.260650843404249,0,0,0,0,0,1.5156378572313,4.99306318531491,1.20956117331872,0.248107807818777,0,0,0.128139149255701,0,0.321707842287215,0,0.616838775210622,0.887808626565635,0.246381468041427,0,0.116210378459959,1.32945394550784,1.80455823272956,2.67034867914099,0.229628896329213,0,0.262248829918848,0.902399225814824,0.231046011313244,2.35304930753057,1.46139224653261,0.633309773357254,0,0,1.29549549661284,0,1.89662506280697,2.00675909541941,0.509752546090077,0.831076008928724,0.671624264166535,0,0,0.256450125116389,0.328014645699706,0.650756789328606,0.206082023295445,0.915694648183434,1.07262349896764,0.574265537996172,1.95018073810956,0,0.193341436584244,0.154048617114644,0.15350367472613,0.275673144969061,0,0,0.170453254832202,0.623224249527161,0.165284915360978,2.11409074101617,1.02090169995667,3.0347334256665,2.32422774648643,0,0,0.616067160352178,0,0,1.11194531462352,0.858749320451947,0,0,0,0.511795582622668,0,0.95460974377781,0.78494864019923,0.179872457583315,0,0.235624804691373,1.2130948894399,0,0.421258456238981,0,0,1.05650146756755,0,0.282810863907425,0,2.2054613741845,0,0.876901770507525,0.578775534266688,0,0.405820753925408,0.6196469961995,0.281695602532241,0.286822704408103,0.589494246078727,1.426684205925,0.354761064070598,0,0,0.379473173765715,1.04980416073495,1.25088746543166,4.02181365321472,2.17781969722645,0.0941438007767792,1.72202149068492,1.68471475667626,2.66058092122005,0.918893600827838,0,0,0,0,0,0,0,0,1.70918513803957,0,1.96032172784825,0,0.432807638929335,0.213425530045242,2.39139409093234,0.997896857164083,0.5745161103971,0.635020748171649,0.649243880549111,0.842391534340376,0.684704037099577,1.25343916618419,0,1.18504244461122,0.802940375518498,0.201799707191048,0,1.71752672377882,0.307240764308458,0,0.166849141711909,1.9538809540204,0,1.23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| ||
|short_description=p2@F12 | |||
}} | }} |
Latest revision as of 06:15, 17 September 2015
Short description: | p2@F12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_F12_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_ENST00000502854, ENST00000510358, uc003mgn.3, uc011dfy.1_5end |
EntrezGene: | F12 |
HGNC: | 3530 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.49e-23 | 253 |
endo-epithelial cell | 8.72e-12 | 42 |
endodermal cell | 2.73e-09 | 58 |
respiratory epithelial cell | 1.23e-08 | 13 |
epithelial cell of tracheobronchial tree | 2.97e-07 | 9 |
epithelial cell of lower respiratory tract | 2.97e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 1.20e-08 | 101 |
epithelial bud | 1.29e-08 | 37 |
urinary system structure | 7.36e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.21e-19 | 235 |
disease of cellular proliferation | 1.20e-18 | 239 |
cell type cancer | 8.67e-16 | 143 |
carcinoma | 3.30e-13 | 106 |
organ system cancer | 2.31e-10 | 137 |