FFCP PHASE1:Hg19::chr5:59783882..59783910,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:59783882..59783910,- to FFCP PHASE1:Hg19::chr5:59783882..59783910,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5144 | |EntrezGene=5144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8783 | |HGNC=8783 | ||
|TSSclassifier=strong | |||
|UniProt=D6RIG1,D6RBB2 | |UniProt=D6RIG1,D6RBB2 | ||
|association_with_transcript=0bp_to_ENST00000502484,ENST00000505507,ENST00000511382,ENST00000515835,uc003jsb.2,uc010iwj.1_5end | |||
|cluster_id=chr5:59783882..59783910,- | |||
|description=CAGE_peak_6_at_PDE4D_5end | |||
|id=chr5:59783882..59783910,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.01e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.72e-42!115;UBERON:0002619!5.72e-24!22;UBERON:0002780!6.16e-24!41;UBERON:0001890!6.16e-24!41;UBERON:0006240!6.16e-24!41;UBERON:0001049!9.59e-24!57;UBERON:0005068!9.59e-24!57;UBERON:0006241!9.59e-24!57;UBERON:0007135!9.59e-24!57;UBERON:0003080!4.57e-23!42;UBERON:0001893!1.33e-22!34;UBERON:0001950!1.55e-22!20;UBERON:0002020!6.78e-22!34;UBERON:0003528!6.78e-22!34;UBERON:0002791!1.39e-21!33;UBERON:0000956!1.52e-21!25;UBERON:0000203!1.52e-21!25;UBERON:0001869!1.69e-21!32;UBERON:0002616!5.55e-20!59;UBERON:0001017!3.67e-19!82;UBERON:0000955!4.93e-19!69;UBERON:0006238!4.93e-19!69;UBERON:0005743!1.80e-18!86;UBERON:0000073!1.58e-17!94;UBERON:0001016!1.58e-17!94;UBERON:0000153!1.36e-15!129;UBERON:0007811!1.36e-15!129;UBERON:0000924!7.89e-15!173;UBERON:0006601!7.89e-15!173;UBERON:0002346!8.73e-15!90;UBERON:0003075!2.60e-14!86;UBERON:0007284!2.60e-14!86;UBERON:0004121!2.63e-14!169;UBERON:0000033!5.38e-14!123;UBERON:0003056!4.14e-13!61;UBERON:0000062!1.16e-10!511;UBERON:0004111!6.97e-10!241;UBERON:0000481!1.88e-09!347;UBERON:0001871!1.19e-08!7;UBERON:0000922!1.57e-08!612;UBERON:0002050!3.08e-08!605;UBERON:0005423!3.08e-08!605;UBERON:0000200!3.29e-08!6;UBERON:0000064!6.11e-08!219;UBERON:0000923!6.59e-08!604;UBERON:0005291!6.59e-08!604;UBERON:0006598!6.59e-08!604;UBERON:0002532!6.59e-08!604;UBERON:0000477!1.34e-07!286;UBERON:0004921!1.88e-07!129;UBERON:0004185!1.88e-07!129;UBERON:0000475!2.96e-07!365;UBERON:0000468!3.13e-07!659;UBERON:0001872!5.28e-07!5;UBERON:0002021!6.82e-07!5;UBERON:0001044!7.81e-07!6;UBERON:0003293!7.81e-07!6;UBERON:0003294!7.81e-07!6;UBERON:0010047!7.81e-07!6;UBERON:0000167!7.81e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.01e-36;22!UBERON:0001950;9.23e-34;20!UBERON:0000956;4.08e-31;25!UBERON:0000203;4.08e-31;25!UBERON:0001869;4.78e-25;32!UBERON:0002791;1.86e-22;32!UBERON:0001893;2.35e-22;34!UBERON:0003528;6.86e-21;34!UBERON:0002020;6.86e-21;34!UBERON:0002780;5.76e-17;41!UBERON:0001890;5.76e-17;41!UBERON:0000200;1.27e-12;6!UBERON:0001872;1.23e-10;5!UBERON:0002021;2.07e-10;5!UBERON:0000073;2.30e-10;53!UBERON:0002616;2.30e-10;53!UBERON:0001871;4.32e-09;6!UBERON:0004921;6.77e-09;33!UBERON:0007023;3.69e-08;114!UBERON:0000922;3.87e-08;49!UBERON:0000955;4.53e-08;68!UBERON:0001017;1.01e-07;75!UBERON:0001870;3.22e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.32e-36,22;UBERON:0007023,4.59e-35,114;UBERON:0001950,6.12e-34,20;UBERON:0000956,2.53e-31,25;UBERON:0000203,2.53e-31,25;UBERON:0001869,2.89e-28,32;UBERON:0001893,3.35e-26,34;UBERON:0002791,1.28e-25,32;UBERON:0002780,2.67e-24,41;UBERON:0001890,2.67e-24,41;UBERON:0003080,2.67e-24,41;UBERON:0006240,2.67e-24,41;UBERON:0003528,9.86e-24,34;UBERON:0002020,9.86e-24,34;UBERON:0011216,2.21e-20,223;UBERON:0000073,1.68e-18,53;UBERON:0002616,1.68e-18,53;UBERON:0001049,1.85e-18,56;UBERON:0005068,1.85e-18,56;UBERON:0006241,1.85e-18,56;UBERON:0007135,1.85e-18,56;UBERON:0000955,3.34e-16,68;UBERON:0006238,3.34e-16,68;UBERON:0003056,4.74e-15,61;UBERON:0001017,2.21e-14,81;UBERON:0004121,4.27e-13,171;UBERON:0000924,4.27e-13,171;UBERON:0006601,4.27e-13,171;UBERON:0002346,5.22e-13,86;UBERON:0001016,5.63e-13,89;UBERON:0000200,1.25e-12,6;UBERON:0003075,5.10e-12,82;UBERON:0007284,5.10e-12,82;UBERON:0001872,1.25e-10,5;UBERON:0002021,1.90e-10,5;UBERON:0001871,3.11e-09,6;UBERON:0004921,6.54e-09,118;UBERON:0010371,1.24e-08,104;UBERON:0004111,1.48e-08,240;UBERON:0000922,9.41e-08,592;UBERON:0002050,1.94e-07,564;UBERON:0005423,2.25e-07,581;UBERON:0000923,3.24e-07,560;UBERON:0010316,3.24e-07,560;UBERON:0005291,3.24e-07,560;UBERON:0006598,3.24e-07,560;UBERON:0010317,3.24e-07,560;UBERON:0002532,3.24e-07,560;UBERON:0001870,3.29e-07,3;UBERON:0001007,8.46e-07,145;UBERON:0001555,8.46e-07,145;UBERON:0007026,8.46e-07,145 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,5.46103430325431,0.791300934685361,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97583067623023,0.50133791063589,1.30361867064741,3.9764297352555,16.5455855902896,0,0,0,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.860509862246441,0,0,0,0,0,0,0,0,0,0.468642863667593,0,0,0,0.23486899728753,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0.109750285408626,0,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.25248486685276,0.190493682876507,0,1.17217447210047,0,0,0,0.571652865261156,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,4.55287225434007,14.9320516584348,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,2.72814814301633,0,0.604780586659361,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,1.20859449591622,0.40101294060657,0,0.459257792658427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64865618636356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0.949138274156178,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.424216295861138,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,1.08890984861323,2.35359501941948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,12.6534576910976,5.04839957415486,17.200999317557,1.9882952955326,0.281338832821026,0,0,0,25.5037424961369,1.10513566212459,0,0,0,0,0,0.358042349351218,0,23.6744173528641,0,0,3.87733098438087,8.07082454008106,7.98455192004777,0.260427761085233,0,0,0.568967241427498,0,0,0,0.291604613383254,3.81974988853243,0,0,0,0,0.295547618953547,4.8264787373874,0,0.83654246567162,4.54006525172403,0.113942055847001,0,0,0,1.5950057986596,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,1.99052386215701,2.65372693510018,1.22206028986725,0,0,0,0.808813595768125,0,0.234264445725339,0,0.19566461893209,0,8.2862724598372,2.41981432097328,2.75465485467441,0.884612114798832,0,0,0,0,0,0,0,0.277349346026277,0,0.195984794828755,0,2.09672001890436,0,0,0,0,4.46149475846729,0,2.48578814858586,0.274083849293502,0,17.1572257040431,0.195551382734803,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0,4.81236890424536,0,0.399358000997982,0,0,0.134366944973453,0,2.32991899054908,3.46646002151784,4.45045635258299,4.98786224520968,0,0.169346664131569,1.59045937961861,1.36203406111576,0,0,0,0,0,11.1779184250765,0,1.26089131678717,1.10154635083496,0,20.0801820052786,0,0,0,0.25426853765475,0.542999601753713,0,0,0,0,0,0,0,0,0.775697738169303,0.13223260174269,0,1.40963004463334,0.320362237703084,4.08731193259131,0.828478110694391,0,0,0,0,0,0,0,0,0.471162288750703,31.0123862988445,28.1880671923535,21.282458220105,0,0.443716206147409,0.496771223531068,0.276697269872462,0,0.151649117541648,0,0,0,0,0,0,0,1.7046270474758,0.251567901752575,0,0.228840068396924,0.151230923763239,0.310874401165561,0,0,0,0,0,0.265841714557995,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.9092148058492,0.194860308839388,0,0,0,6.63586853635042,0,0,0,0.344429959321631,0,0,0,0.622077260032973,0.127894371303652,0,0,0.54604819096007,1.01839517972415,7.86527204376227,0,1.11728983594649,0,0.0788617450012534,2.40171224485641,0,0,10.5335929158194,19.8375206855819,15.0055827513722,11.8967491259638,35.5421091672623,5.94752371192274,13.2410029418118,0,5.39812451755641,0,0,0,0,0,0,5.26472298444801,0,0.781514011233092,0,0,0,15.1284189545204,20.30803056396,21.9088004291255,13.9514782426595,19.1441183156377,38.3780436800028,7.93937885422871,0,0,2.14280734351315,2.35398605553177,0,0.682986574053893,3.10458295569236,0,0,1.2914249265598,11.3786898263729,0,0,22.449024555247,0.628462359664008,0,6.39211104356647,0.215927591218621,0,1.21510125100316,0,0,0,0,2.07216164163037,0.3414369541879,0.691259661814092,132.940253875466,0,0,3.81048345171836,3.6657098967048,0,0,0,0.098150233615243,0,0,0.205325613712494,0,9.22850886812365,0,0.397901550322736,0.118920090777569,4.74373544563632,0,0,2.39239890134628,1.96703604453562,0,60.3064871514608,1.17838273550813,0.785233868459781,0.594092800654172,1.2679671827502,0,0,0,0,0,0,0,7.30336388246517,75.6903317617492,0.286679166302903,0,7.34308094061879,3.49080552272302,8.99345628876181,0.371995018166751,0,0,0,0,0,0,0,0,0,0.909344378618873,0.267964130156178,0,0.517164979309476,19.1910583710883,7.61806180683969,0.645889098360061,1.42771842880473,0,0,0.202117188958219,5.8783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| ||
|short_description=p6@PDE4D | |||
}} | }} |
Latest revision as of 08:18, 18 September 2015
Short description: | p6@PDE4D |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PDE4D_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000502484, ENST00000505507, ENST00000511382, ENST00000515835, uc003jsb.2, uc010iwj.1_5end |
EntrezGene: | PDE4D |
HGNC: | 8783 |
UniProt: | D6RIG1D6RBB2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data