FFCP PHASE1:Hg19::chr6:7567611..7567625,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:7567611..7567625,+ to FFCP PHASE1:Hg19::chr6:7567611..7567625,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:7567611..7567625,+ | |||
|coexpression_cluster_id=C324 | |||
|description=CAGE_peak_at_chr6:7567611..7567625,+ | |||
|id=chr6:7567611..7567625,+ | |||
|ontology_enrichment_celltype=CL:0000066!7.19e-18!254;CL:0000223!6.19e-15!59;CL:0002076!1.97e-12!43;CL:0000622!2.86e-07!5;CL:0002251!3.53e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002541;4.38e-10;3!CL:0002623;5.23e-10;3!CL:0002336;1.00e-07;1!CL:0002261;1.00e-07;1!CL:0002170;1.00e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.39e-10,3;CL:0002623,4.59e-10,3;CL:0002336,6.10e-08,1;CL:0002261,6.10e-08,1;CL:0002170,6.10e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.00e-07;1!UBERON:0006298;1.00e-07;1 | |||
|ontology_enrichment_disease=DOID:305!2.90e-11!106;DOID:0050687!5.73e-09!143;DOID:7!4.06e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:3151;1.00e-07;1!DOID:3149;1.00e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.75e-07,1;DOID:3149,1.75e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.42e-12!72;UBERON:0004119!4.10e-11!169;UBERON:0000925!4.10e-11!169;UBERON:0006595!4.10e-11!169;UBERON:0002365!1.40e-10!31;UBERON:0002330!1.40e-10!31;UBERON:0001007!7.10e-10!155;UBERON:0001555!7.10e-10!155;UBERON:0007026!7.10e-10!155;UBERON:0000166!2.46e-09!21;UBERON:0001041!2.82e-09!98;UBERON:0004921!4.41e-09!129;UBERON:0004185!4.41e-09!129;UBERON:0000077!4.52e-09!130;UBERON:0001044!2.04e-08!6;UBERON:0003293!2.04e-08!6;UBERON:0003294!2.04e-08!6;UBERON:0010047!2.04e-08!6;UBERON:0000167!2.04e-08!6;UBERON:0000161!2.33e-08!35;UBERON:0002530!3.65e-08!59;UBERON:0000065!7.86e-08!53;UBERON:0000165!3.17e-07!28;UBERON:0000930!3.17e-07!28;UBERON:0003408!3.83e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;9.43e-11;28!UBERON:0001044;1.51e-10;6!UBERON:0003293;1.51e-10;6!UBERON:0003294;1.51e-10;6!UBERON:0010047;1.51e-10;6!UBERON:0003408;1.51e-10;6!UBERON:0000167;1.51e-10;6!UBERON:0003124;4.38e-10;3!UBERON:0000920;4.38e-10;3!UBERON:0001723;7.62e-10;3!UBERON:0001033;7.62e-10;3!UBERON:0005795;1.00e-07;1!UBERON:0007029;1.00e-07;1!UBERON:0001736;1.00e-07;1!UBERON:0007195;1.00e-07;1!UBERON:0001041;1.08e-07;14!UBERON:0000014;2.58e-07;4!UBERON:0002365;2.68e-07;31!UBERON:0002330;2.68e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,1.40e-10,6;UBERON:0003293,1.40e-10,6;UBERON:0003294,1.40e-10,6;UBERON:0010047,1.40e-10,6;UBERON:0000167,1.40e-10,6;UBERON:0000165,2.38e-10,29;UBERON:0000930,2.38e-10,29;UBERON:0000166,2.43e-10,22;UBERON:0000920,4.39e-10,3;UBERON:0001723,1.06e-09,3;UBERON:0001033,1.06e-09,3;UBERON:0010056,1.06e-09,3;UBERON:0000161,3.92e-08,36;UBERON:0007029,7.97e-08,1;UBERON:0001736,1.04e-07,1;UBERON:0006298,1.04e-07,1;UBERON:0007195,1.44e-07,1;UBERON:0000014,3.03e-07,4;UBERON:0002365,4.39e-07,31;UBERON:0002330,4.39e-07,31 | |||
|phase1_expression=0,0.856402095563933,0.563817616383885,1.0007329835313,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0.90361775633475,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.206105058476878,0,0,0.168776332241266,0,0.504867548488229,0,0,0,0,0,0.386521706326594,0,0.286804595389004,0.121973706129595,0,0,0.310983165046111,0,0,0,0,0,0,0,0.118306800039844,0,0.723033089650446,0,0,0,0.539325232640658,0.196221465125346,0.38474715694639,0,0,0,0,1.26755034821831,1.96565443335525,0.590789906681404,0,0,0,1.09750285408626,0,0.804231779293047,1.574003567695,0,0,0,0,0,0,0.462985512576611,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0.283550194484773,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0.579125226670317,0,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61384789315225,0.280660094433074,0.128139149255701,0,0.965123526861645,0,0,0,0,0,0,0.241718899183244,0.601519410909855,1.38121483403844,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.127612712494584,0.708104465988849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.296964680832639,2.76444631889309,0,0.140669416410513,0,0,0,0.19924798825107,0,1.51159648712566,0,0,0.622079175323615,0.179736702294654,0.179021174675609,0,0.0986434056369336,0,1.11136990144637,0,0,0,0.260427761085233,0,0,0.1137934482855,0,0.945550727071745,0,0,0,0,0.120596438625408,0,0,0,0,0.21787692703798,0.139423744278603,0.384751292518985,0,0,0.269272933229316,1.73835795075213,2.23300811812344,0,3.73124343213044,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0.207376382794494,0,0,0,0,0,0,0.694238953340524,0.293977192243133,0,0,0,0.0967563312890851,0.0730893170861856,0,1.16386819786103,0,0.225980740780532,0,0,0,0.391102765469606,0,0,0.19980960958213,0.144090417154106,0,0,0,0,1.41416420770077,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.798716001995964,3.004582336956,0,0.134366944973453,0,1.16495949527454,0.157566364614447,0.576911008668165,0.337017719270924,0.0984274815147488,0,0,0,0,0.137539436597234,0,0,1.5476039091159,0,1.0063040627978,0.0788057072991982,0.0524545881349981,0.316801009558219,0,0.191915197319445,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0.171086837884329,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0.314108192500469,0,0.122026264901963,0,0,0,0,0.138348634936231,0,0,0.570930667089935,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0.244736704506468,0,0,0,0.176689145945881,0,0,0.256241518587947,0,0,0,0,0.398594520940089,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0.196295437002051,0,2.01771458373847,0.231051332300676,0,0,0,0,0,0,0,0.818859587550484,0,0,0,0,0,0.546974809018219,0.548257766857182,0,0,0.127762427639595,0,0,0,0,0.266107110487916,0,0,0,0,0.118193840883968,0,0,0,0.280272163313789,0,0,0,0,0.158013611732727,0,0,0,0.207216164163037,2.3900586793153,2.76503864725637,0.430227358820278,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,1.45713297917742,0,1.39265542612958,0,0.33883824611688,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0.178553938605658,0.352894871715692,0,0,1.37618785021362,0,0.157771562193185,0,0,2.1161073620616,0.371995018166751,0,0,0,0.218531143927391,0,0.407955318967927,0,0.275684698604535,1.0028301571695,0,0,0,0.103432995861895,1.49263787330687,0,0.0645889098360061,0.124149428591716,0,0,0.202117188958219,7.62008617639365,1.02669990325584,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,1.62758471326295,0,0,0 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|phase1_expression=0,0.856402095563933,0.563817616383885,1.0007329835313,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0.90361775633475,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.206105058476878,0,0,0.168776332241266,0,0.504867548488229,0,0,0,0,0,0.386521706326594,0,0.286804595389004,0.121973706129595,0,0,0.310983165046111,0,0,0,0,0,0,0,0.118306800039844,0,0.723033089650446,0,0,0,0.539325232640658,0.196221465125346,0.38474715694639,0,0,0,0,1.26755034821831,1.96565443335525,0.590789906681404,0,0,0,1.09750285408626,0,0.804231779293047,1.574003567695,0,0,0,0,0,0,0.462985512576611,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0.283550194484773,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0.579125226670317,0,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61384789315225,0.280660094433074,0.128139149255701,0,0.965123526861645,0,0,0,0,0,0,0.241718899183244,0.601519410909855,1.38121483403844,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.127612712494584,0.708104465988849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.296964680832639,2.76444631889309,0,0.140669416410513,0,0,0,0.19924798825107,0,1.51159648712566,0,0,0.622079175323615,0.179736702294654,0.179021174675609,0,0.0986434056369336,0,1.11136990144637,0,0,0,0.260427761085233,0,0,0.1137934482855,0,0.945550727071745,0,0,0,0,0.120596438625408,0,0,0,0,0.21787692703798,0.139423744278603,0.384751292518985,0,0,0.269272933229316,1.73835795075213,2.23300811812344,0,3.73124343213044,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0.207376382794494,0,0,0,0,0,0,0.694238953340524,0.293977192243133,0,0,0,0.0967563312890851,0.0730893170861856,0,1.16386819786103,0,0.225980740780532,0,0,0,0.391102765469606,0,0,0.19980960958213,0.144090417154106,0,0,0,0,1.41416420770077,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.798716001995964,3.004582336956,0,0.134366944973453,0,1.16495949527454,0.157566364614447,0.576911008668165,0.337017719270924,0.0984274815147488,0,0,0,0,0.137539436597234,0,0,1.5476039091159,0,1.0063040627978,0.0788057072991982,0.0524545881349981,0.316801009558219,0,0.191915197319445,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0.171086837884329,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0.314108192500469,0,0.122026264901963,0,0,0,0,0.138348634936231,0,0,0.570930667089935,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0.244736704506468,0,0,0,0.176689145945881,0,0,0.256241518587947,0,0,0,0,0.398594520940089,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0.196295437002051,0,2.01771458373847,0.231051332300676,0,0,0,0,0,0,0,0.818859587550484,0,0,0,0,0,0.546974809018219,0.548257766857182,0,0,0.127762427639595,0,0,0,0,0.266107110487916,0,0,0,0,0.118193840883968,0,0,0,0.280272163313789,0,0,0,0,0.158013611732727,0,0,0,0.207216164163037,2.3900586793153,2.76503864725637,0.430227358820278,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,1.45713297917742,0,1.39265542612958,0,0.33883824611688,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0.178553938605658,0.352894871715692,0,0,1.37618785021362,0,0.157771562193185,0,0,2.1161073620616,0.371995018166751,0,0,0,0.218531143927391,0,0.407955318967927,0,0.275684698604535,1.0028301571695,0,0,0,0.103432995861895,1.49263787330687,0,0.0645889098360061,0.124149428591716,0,0,0.202117188958219,7.62008617639365,1.02669990325584,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,1.62758471326295,0,0,0 | ||
|short_description=p@chr6:7567611..7567625,+ | |||
}} | }} |
Latest revision as of 03:09, 31 July 2015
Short description: | p@chr6:7567611..7567625, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:7567611..7567625, + |
Coexpression cluster: | C324_tongue_salivary_oral_Prostate_amniotic_chorionic_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.39e-10 | 3 |
acinar cell of salivary gland | 4.59e-10 | 3 |
buccal mucosa cell | 6.10e-08 | 1 |
endothelial cell of viscerocranial mucosa | 6.10e-08 | 1 |
keratinized cell of the oral mucosa | 6.10e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 1.40e-10 | 6 |
gland of oral region | 1.40e-10 | 6 |
gland of foregut | 1.40e-10 | 6 |
oral gland | 1.40e-10 | 6 |
oral cavity | 1.40e-10 | 6 |
mouth | 2.38e-10 | 29 |
stomodeum | 2.38e-10 | 29 |
oral opening | 2.43e-10 | 22 |
egg chorion | 4.39e-10 | 3 |
tongue | 1.06e-09 | 3 |
gustatory system | 1.06e-09 | 3 |
future tongue | 1.06e-09 | 3 |
orifice | 3.92e-08 | 36 |
surface | 7.97e-08 | 1 |
submandibular gland | 1.04e-07 | 1 |
submandibular gland primordium | 1.04e-07 | 1 |
stroma of bone marrow | 1.44e-07 | 1 |
zone of skin | 3.03e-07 | 4 |
exocrine gland | 4.39e-07 | 31 |
exocrine system | 4.39e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.75e-07 | 1 |
keratoacanthoma | 1.75e-07 | 1 |