FFCP PHASE1:Hg19::chr7:115898057..115898087,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:115898057..115898087,+ to FFCP PHASE1:Hg19::chr7:115898057..115898087,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26136 | |EntrezGene=26136 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=14620 | |HGNC=14620 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-259bp_to_AF147329_5end | |||
|cluster_id=chr7:115898057..115898087,+ | |||
|description=CAGE_peak_10_at_TES_5end | |||
|id=chr7:115898057..115898087,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.55e-13!42;CL:0000860!1.58e-12!45;CL:0002194!2.65e-08!63;CL:0000576!2.65e-08!63;CL:0000040!2.65e-08!63;CL:0000559!2.65e-08!63;CL:0002009!4.33e-08!65;CL:0002087!6.84e-07!119;CL:0000557!8.38e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.38e-28;33!CL:0002057;2.38e-28;33!CL:0000473;6.11e-21;39!CL:0000234;6.11e-21;39!CL:0000576;1.51e-12;48!CL:0000766;6.89e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.24e-24,42;CL:0002057,1.24e-24,42;CL:0000473,4.32e-21,48;CL:0000234,4.32e-21,48;CL:0002194,3.85e-16,59;CL:0000576,3.85e-16,59;CL:0000040,3.85e-16,59;CL:0000559,3.85e-16,59;CL:0002009,1.67e-15,61;CL:0000839,4.46e-14,66;CL:0000557,8.11e-14,67;CL:0000766,1.26e-12,72;CL:0002087,5.72e-10,115;CL:0002031,2.20e-09,120;CL:0000738,8.26e-08,136;CL:0000763,2.56e-07,108;CL:0000049,2.56e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;6.67e-19;42 | |||
|ontology_enrichment_disease=DOID:0050687!7.85e-09!143;DOID:305!2.72e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.49e-13,76;UBERON:0004765,2.58e-12,90;UBERON:0001474,2.69e-12,82;UBERON:0002405,8.50e-12,93;UBERON:0002390,5.35e-11,98;UBERON:0003061,5.35e-11,98;UBERON:0001434,1.07e-10,100;UBERON:0002193,1.26e-09,108;UBERON:0002204,3.01e-08,167;UBERON:0003081,9.40e-07,203 | |||
|phase1_expression=0,0,0,0,0.446961094427288,1.74467704820074,0,0,0,0,0,0.436882744260345,0.791300934685361,0.247532705920093,0.331397375727916,1.34465029290355,0,0,0,0.123121058076788,0,0,0,0,0.251085279189606,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0.142169232487422,0,0.553995408531877,0,0.868043482863407,0,0,0,0.436194716338694,0.755751887377619,1.69808842831471,1.16214518452842,1.23350366406548,0.929119112685311,0.863077176966451,1.5369642391746,0.47296445977717,1.03423704220986,0,0,1.12945403725563,0.545812300115692,0.898893937780338,2.44867113896722,0.962787081228281,3.19668562899521,1.9791078011203,0.598390972864896,0.852449501065388,1.7412554317715,3.97169657283798,1.86846674698672,1.7587406567972,0.521482918420201,0.434377689410233,1.21079900526674,1.84138817993782,1.58231193720442,0,0,0,0.336985893439485,0,0.16072558669708,0.285012743741249,0,0,0,0,0.889509253863555,0.426730222566507,0.800791974072025,0.574752439954483,0,0,1.1384259382189,0,0,0,0,0,0.393419540227666,0,0.205601498999509,0,0,0.473447805734733,0,0.222820913770347,0.589211814949674,0,0,0.384273959177026,0.260118695119756,0.657751618414705,0.276350017785848,0,0.14828656316206,0,1.04535523804977,0,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0.821127996921047,0,0.534880391567015,0.144824403882799,4.87613732627923,0.670700859703636,0,0,0,0.289693037921647,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.175669571386252,0,0,0.370784442784429,0.324547393654683,0.174129737299267,0,0.238490624305342,0.571994910780128,0,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0.496971951695318,0.506522046658319,0,0,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0.576175924479999,0,0,0.570471821544449,0.149448680551801,0,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0,0.427114777637135,0,0,0,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0,0.169560592310488,0.773043412653187,0.545492241181669,0.286804595389004,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0.354920400119532,0.168584690078102,0.482022059766964,0.772057809126758,0.217879444092406,0.237270619111097,0.539325232640658,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0.368965315629341,0.343135620597051,0,0,0.201057944823262,0.277765335475589,0,0,0,0,0.70445216541493,0.144366447761074,0,0.190254152234598,0,0,0,0.234004265139238,0.297262324577456,0,0.335964256397719,0,0.626909658919938,0.290633938513962,0,0.492663237895943,0,0,0,0,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0.43596006883328,0.07333828582095,0.129271715757778,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0.602878754119172,0,0.399891964728228,0,0.502257091432126,0,0,0,0,0.289562613335158,0,0,1.00876629594175,0.197030760201927,0.215627574859517,0.513372145118994,0,0,0,0,0.637938751653163,0,0,0,0,1.00034104211935,0,0,0.892144943985809,1.26161932027148,0.702848489956279,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0.206768026122887,0.431428401637234,0.213455115606889,0.606255142892519,0,0.907170879989041,0,0,0.280660094433074,0,0,0.321707842287215,0,0,0,0,0,0,0.120859449591622,0.601519410909855,0.644566922551274,0.459257792658427,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0.512900250232778,0.656029291399411,0,0.103041011647722,0,0,0,0,1.6068392984416,0.290012154876366,0.154048617114644,0,0,0.214840489736547,0,0.0852266274161009,0,0.661139661443912,0.960950336825531,0,1.4162089319777,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,1.58510321173008,0.421258456238981,0,0.243713489631284,0,0,0,0,0.551365343546124,0,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0,0.430234056612155,0.491245205065606,0,0,0.211107635297664,0,0,0,0.384888450902048,0.670302275535787,0,0.188287601553558,0,0,0.443430153536676,0.918893600827838,0.507447609232169,0.764637207142375,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0.211673582723883,0,0,0,0.156679895773023,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0.334330152832435,0,0.71623345421307,1.48482340416319,0,0,0,0.111308705022906,0,0,0.597743964753209,0.552567831062295,0,0,0,0.311039587661807,0.179736702294654,1.07412704805365,0,0.690503839458535,0,0,0,0,0,0.520855522170466,0.262379999988587,0.724999575434793,0.341380344856499,0.762760950878299,0.236387681767936,0.344743373241465,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0,0.278847488557207,0.384751292518985,0.113942055847001,0,0.179515288819544,0.651884231532048,0.957003479195758,0.274792780205587,0.533034776018635,0,0,0.166211681900156,0,0.19606253431774,0.167821586975843,0.37950746544837,0,2.3209787098083,0.163232808159148,0,0,0,0.176915129006678,4.888241159469,0,0,0.208843899010911,0,0,0,0.1824547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| 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| ||
|short_description=p10@TES | |||
}} | }} |
Latest revision as of 07:04, 25 September 2015
Short description: | p10@TES |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TES_5end |
Coexpression cluster: | NA |
Association with transcript: | -259bp_to_AF147329_5end |
EntrezGene: | TES |
HGNC: | 14620 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.24e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.24e-24 | 42 |
defensive cell | 4.32e-21 | 48 |
phagocyte | 4.32e-21 | 48 |
monopoietic cell | 3.85e-16 | 59 |
monocyte | 3.85e-16 | 59 |
monoblast | 3.85e-16 | 59 |
promonocyte | 3.85e-16 | 59 |
macrophage dendritic cell progenitor | 1.67e-15 | 61 |
myeloid lineage restricted progenitor cell | 4.46e-14 | 66 |
granulocyte monocyte progenitor cell | 8.11e-14 | 67 |
myeloid leukocyte | 1.26e-12 | 72 |
nongranular leukocyte | 5.72e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 2.20e-09 | 120 |
leukocyte | 8.26e-08 | 136 |
myeloid cell | 2.56e-07 | 108 |
common myeloid progenitor | 2.56e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.49e-13 | 76 |
skeletal element | 2.58e-12 | 90 |
bone element | 2.69e-12 | 82 |
immune system | 8.50e-12 | 93 |
hematopoietic system | 5.35e-11 | 98 |
blood island | 5.35e-11 | 98 |
skeletal system | 1.07e-10 | 100 |
hemolymphoid system | 1.26e-09 | 108 |
musculoskeletal system | 3.01e-08 | 167 |
lateral plate mesoderm | 9.40e-07 | 203 |