FFCP PHASE1:Hg19::chr7:139876734..139876764,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:139876734..139876764,- to FFCP PHASE1:Hg19::chr7:139876734..139876764,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80853 | |EntrezGene=80853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22224 | |HGNC=22224 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZMT4 | |UniProt=Q6ZMT4 | ||
|association_with_transcript=0bp_to_ENST00000006967,NM_030647,uc003vvm.2_5end | |||
|cluster_id=chr7:139876734..139876764,- | |||
|coexpression_cluster_id=C4658 | |||
|description=CAGE_peak_2_at_JHDM1D_5end | |||
|id=chr7:139876734..139876764,- | |||
|ontology_enrichment_celltype=CL:0000738!2.73e-28!140;CL:0002031!3.12e-24!124;CL:0002087!3.98e-24!119;CL:0002057!2.85e-19!42;CL:0000766!2.15e-18!76;CL:0000037!1.58e-17!172;CL:0000566!1.58e-17!172;CL:0002009!7.97e-17!65;CL:0000860!1.09e-16!45;CL:0002032!2.67e-16!165;CL:0000837!2.67e-16!165;CL:0000839!4.25e-16!70;CL:0002194!6.52e-16!63;CL:0000576!6.52e-16!63;CL:0000040!6.52e-16!63;CL:0000559!6.52e-16!63;CL:0000557!8.21e-16!71;CL:0000988!1.34e-15!182;CL:0000763!2.39e-09!112;CL:0000049!2.39e-09!112;CL:0000791!7.57e-09!18;CL:0000789!7.57e-09!18;CL:0002420!7.57e-09!18;CL:0002419!7.57e-09!18;CL:0000790!7.57e-09!18;CL:0000838!8.14e-08!52;CL:0000542!1.70e-07!53;CL:0000051!1.70e-07!53;CL:0000236!8.59e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.29e-17;33!CL:0002057;4.29e-17;33!CL:0000473;1.22e-14;39!CL:0000234;1.22e-14;39!CL:0000576;9.26e-13;48!CL:0000766;9.81e-10;69!CL:0000791;2.62e-09;18!CL:0000789;2.62e-09;18!CL:0002419;2.62e-09;18!CL:0002087;3.66e-09;104!CL:0000236;4.23e-08;13!CL:0000738;1.52e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.78e-33,136;CL:0002087,1.41e-28,115;CL:0002031,1.63e-28,120;CL:0000766,4.56e-22,72;CL:0000037,6.74e-21,168;CL:0002009,1.17e-20,61;CL:0000860,3.09e-20,42;CL:0002057,3.09e-20,42;CL:0000473,3.45e-20,48;CL:0000234,3.45e-20,48;CL:0002194,1.21e-19,59;CL:0000576,1.21e-19,59;CL:0000040,1.21e-19,59;CL:0000559,1.21e-19,59;CL:0002032,1.41e-19,161;CL:0000837,1.41e-19,161;CL:0000988,1.54e-19,177;CL:0000839,2.58e-19,66;CL:0000557,3.46e-19,67;CL:0000763,1.63e-11,108;CL:0000049,1.63e-11,108;CL:0000791,3.04e-09,18;CL:0000789,3.04e-09,18;CL:0002420,3.04e-09,18;CL:0002419,3.04e-09,18;CL:0000790,3.04e-09,18;CL:0000838,8.01e-09,52;CL:0000542,2.61e-08,53;CL:0000051,2.61e-08,53;CL:0000236,6.12e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;6.01e-15;42!CL:0000790;2.62e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.99e-22!115;UBERON:0002390!3.36e-19!102;UBERON:0003061!3.36e-19!102;UBERON:0002193!1.46e-16!112;UBERON:0002371!1.41e-12!80;UBERON:0002405!2.32e-11!115;UBERON:0001474!3.00e-11!86;UBERON:0004765!3.91e-08!101;UBERON:0001434!3.91e-08!101;UBERON:0000178!8.93e-08!15;UBERON:0000179!8.93e-08!15;UBERON:0000463!8.93e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.56e-08;15!UBERON:0000179;3.56e-08;15!UBERON:0000463;3.56e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.40e-23,114;UBERON:0002390,1.00e-22,98;UBERON:0003061,1.00e-22,98;UBERON:0002193,4.04e-20,108;UBERON:0002371,2.46e-15,76;UBERON:0002405,3.93e-14,93;UBERON:0001474,1.81e-13,82;UBERON:0004765,2.84e-10,90;UBERON:0001434,9.44e-09,100;UBERON:0000178,4.09e-08,15;UBERON:0000179,4.09e-08,15;UBERON:0000463,4.09e-08,15 | |||
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| ||
|short_description=p2@JHDM1D | |||
}} | }} |
Latest revision as of 17:26, 16 September 2015
Short description: | p2@JHDM1D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_JHDM1D_5end |
Coexpression cluster: | C4658_Neutrophils_small_Eosinophils_CD14_neuroectodermal_Whole_Peripheral |
Association with transcript: | 0bp_to_ENST00000006967, NM_030647, uc003vvm.2_5end |
EntrezGene: | JHDM1D |
HGNC: | 22224 |
UniProt: | Q6ZMT4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.40e-23 | 114 |
hematopoietic system | 1.00e-22 | 98 |
blood island | 1.00e-22 | 98 |
hemolymphoid system | 4.04e-20 | 108 |
bone marrow | 2.46e-15 | 76 |
immune system | 3.93e-14 | 93 |
bone element | 1.81e-13 | 82 |
skeletal element | 2.84e-10 | 90 |
skeletal system | 9.44e-09 | 100 |
blood | 4.09e-08 | 15 |
haemolymphatic fluid | 4.09e-08 | 15 |
organism substance | 4.09e-08 | 15 |