FFCP PHASE1:Hg19::chr9:109040419..109040430,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr9:109040419..109040430,+ to FFCP PHASE1:Hg19::chr9:109040419..109040430,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-242bp_to_ENST00000435485_5end | |||
|cluster_id=chr9:109040419..109040430,+ | |||
|description=CAGE_peak_2_at_ENST00000435485_5end | |||
|id=chr9:109040419..109040430,+ | |||
|ontology_enrichment_celltype=CL:0000148!7.36e-07!10;CL:0000541!7.36e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000054;2.35e-11;2!CL:0000137;2.35e-11;2!CL:0000092;2.35e-11;2!CL:0000062;8.09e-10;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,5.40e-17,11;CL:0000375,5.40e-17,11;CL:0000335,5.40e-17,11;CL:0000054,2.23e-11,2;CL:0000137,2.23e-11,2;CL:0000092,2.23e-11,2 | |||
|ontology_enrichment_development_v019=CL:0000335;5.86e-17;11!UBERON:0010122;4.30e-11;2!UBERON:0006241;8.02e-08;3!UBERON:0003057;8.02e-08;3 | |||
|ontology_enrichment_disease=DOID:1909!5.44e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;3.01e-40;2!DOID:5662;1.53e-21;1!DOID:200;2.35e-11;2!DOID:4305;2.35e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.49e-40,2;DOID:5662,1.53e-21,1;DOID:200,2.23e-11,2;DOID:4305,2.23e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0009663!5.07e-20!7;UBERON:0000369!2.43e-16!4;UBERON:0002435!2.43e-16!4;UBERON:0000204!2.43e-16!4;UBERON:0010082!2.43e-16!4;UBERON:0002308!1.89e-15!9;UBERON:0002420!1.89e-15!9;UBERON:0000125!1.89e-15!9;UBERON:0007245!1.89e-15!9;UBERON:0010009!1.89e-15!9;UBERON:0010011!1.89e-15!9;UBERON:0000454!1.89e-15!9;UBERON:0005383!6.30e-13!3;UBERON:0005382!6.30e-13!3;UBERON:0005743!1.67e-09!86;UBERON:0002780!2.12e-09!41;UBERON:0001890!2.12e-09!41;UBERON:0006240!2.12e-09!41;UBERON:0001873!2.64e-09!2;UBERON:0010122!2.64e-09!2;UBERON:0003080!3.92e-09!42;UBERON:0001049!5.25e-09!57;UBERON:0005068!5.25e-09!57;UBERON:0006241!5.25e-09!57;UBERON:0007135!5.25e-09!57;UBERON:0001017!8.00e-09!82;UBERON:0000073!2.79e-08!94;UBERON:0001016!2.79e-08!94;UBERON:0002791!6.59e-08!33;UBERON:0002020!1.22e-07!34;UBERON:0003528!1.22e-07!34;UBERON:0001893!1.22e-07!34;UBERON:0003075!3.64e-07!86;UBERON:0007284!3.64e-07!86;UBERON:0000955!6.62e-07!69;UBERON:0006238!6.62e-07!69;UBERON:0003056!6.81e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001873;4.30e-11;2!UBERON:0001474;1.26e-10;18!UBERON:0002240;8.02e-08;3!UBERON:0005174;8.02e-08;3!UBERON:0005383;8.02e-08;3!UBERON:0001137;8.02e-08;3!UBERON:0005382;8.02e-08;3!UBERON:0004765;1.55e-07;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001873,4.09e-11,2;UBERON:0010122,4.09e-11,2;UBERON:0005383,7.76e-08,3;UBERON:0005382,7.76e-08,3;UBERON:0002240,8.29e-08,3;UBERON:0005174,8.29e-08,3;UBERON:0001137,8.29e-08,3 | |||
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| ||
|short_description=p2@ENST00000435485 | |||
}} | }} |
Latest revision as of 21:28, 31 July 2015
Short description: | p2@ENST00000435485 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000435485_5end |
Coexpression cluster: | NA |
Association with transcript: | -242bp_to_ENST00000435485_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 5.40e-17 | 11 |
osteoprogenitor cell | 5.40e-17 | 11 |
mesenchyme condensation cell | 5.40e-17 | 11 |
bone matrix secreting cell | 2.23e-11 | 2 |
osteocyte | 2.23e-11 | 2 |
osteoclast | 2.23e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
caudate nucleus | 4.09e-11 | 2 |
future caudate nucleus | 4.09e-11 | 2 |
caudate-putamen | 7.76e-08 | 3 |
dorsal striatum | 7.76e-08 | 3 |
spinal cord | 8.29e-08 | 3 |
dorsal region element | 8.29e-08 | 3 |
dorsum | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.49e-40 | 2 |
pleomorphic carcinoma | 1.53e-21 | 1 |
giant cell tumor | 2.23e-11 | 2 |
bone giant cell tumor | 2.23e-11 | 2 |