FFCP PHASE1:Hg19::chr9:35689148..35689192,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:35689148..35689192,+ to FFCP PHASE1:Hg19::chr9:35689148..35689192,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:35689148..35689192,+ | |||
|coexpression_cluster_id=C638 | |||
|description=CAGE_peak_at_chr9:35689148..35689192,+ | |||
|id=chr9:35689148..35689192,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.70e-31!180;CL:0000680!5.72e-23!57;CL:0000056!5.72e-23!57;CL:0000355!5.72e-23!57;CL:0000187!1.48e-22!54;CL:0000183!5.68e-22!59;CL:0000192!3.90e-21!42;CL:0000514!3.90e-21!42;CL:0000393!2.66e-19!60;CL:0000211!2.66e-19!60;CL:0000359!1.16e-17!32;CL:0000222!4.23e-15!119;CL:0000057!1.68e-12!75;CL:0000220!1.42e-08!246;CL:0002321!2.23e-08!248 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.38e-21;32!CL:0000192;5.41e-19;43!CL:0000187;1.11e-14;55!CL:0000393;4.75e-12;61!CL:0000211;4.75e-12;61!CL:0002539;9.47e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.77e-28,58;CL:0000056,1.77e-28,58;CL:0000355,1.77e-28,58;CL:0000187,2.14e-28,55;CL:0000192,1.25e-26,43;CL:0000514,1.25e-26,43;CL:0000393,9.56e-25,61;CL:0000211,9.56e-25,61;CL:0000359,1.48e-22,32;CL:0000222,2.56e-16,121;CL:0000057,2.11e-09,76;CL:0002539,8.07e-08,10;CL:0000048,1.55e-07,427;CL:0000723,2.78e-07,433;CL:0000034,9.04e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;5.41e-19;43!CL:0000355;2.66e-13;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.06e-28!83;UBERON:0002329!1.06e-28!83;UBERON:0003077!1.06e-28!83;UBERON:0003059!1.06e-28!83;UBERON:0007282!1.06e-28!83;UBERON:0009618!1.06e-28!83;UBERON:0007285!1.06e-28!83;UBERON:0004290!1.12e-27!70;UBERON:0002385!1.42e-26!63;UBERON:0001015!1.42e-26!63;UBERON:0000383!1.42e-26!63;UBERON:0001134!6.09e-26!61;UBERON:0002036!6.09e-26!61;UBERON:0003082!6.09e-26!61;UBERON:0000486!1.33e-22!82;UBERON:0005256!1.17e-20!143;UBERON:0002100!8.81e-17!216;UBERON:0003104!9.13e-17!238;UBERON:0009142!9.13e-17!238;UBERON:0000481!1.07e-14!347;UBERON:0001637!2.35e-13!42;UBERON:0003509!2.35e-13!42;UBERON:0004572!2.35e-13!42;UBERON:0000475!1.24e-12!365;UBERON:0004872!1.40e-12!84;UBERON:0001981!3.10e-12!60;UBERON:0007500!3.10e-12!60;UBERON:0004537!3.10e-12!60;UBERON:0006965!3.10e-12!60;UBERON:0000490!1.64e-11!138;UBERON:0004573!1.34e-10!33;UBERON:0004571!1.34e-10!33;UBERON:0002049!1.82e-10!79;UBERON:0007798!1.82e-10!79;UBERON:0000926!1.11e-09!448;UBERON:0004120!1.11e-09!448;UBERON:0006603!1.11e-09!448;UBERON:0000468!1.68e-09!659;UBERON:0003914!6.85e-09!118;UBERON:0000055!1.08e-08!69;UBERON:0001009!1.37e-08!113;UBERON:0004535!4.12e-08!110;UBERON:0003102!7.27e-08!95;UBERON:0001135!1.08e-07!15;UBERON:0007100!5.84e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;3.13e-14;31!UBERON:0001015;3.13e-14;31!UBERON:0000383;3.13e-14;31!UBERON:0004573;2.25e-12;33!UBERON:0004571;2.25e-12;33!UBERON:0001637;1.38e-11;42!UBERON:0003509;1.38e-11;42!UBERON:0004572;1.38e-11;42!UBERON:0001135;4.31e-09;15!UBERON:0007500;1.87e-08;56!UBERON:0001981;1.87e-08;56!UBERON:0004537;1.87e-08;56!UBERON:0004237;9.47e-08;10!UBERON:0004695;9.47e-08;10!UBERON:0002111;9.47e-08;10!UBERON:0004178;9.47e-08;10!UBERON:0002204;1.73e-07;70!UBERON:0001134;5.10e-07;16!UBERON:0002036;5.10e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.81e-33,73;UBERON:0002329,2.06e-33,71;UBERON:0003059,2.06e-33,71;UBERON:0007282,2.06e-33,71;UBERON:0004290,2.06e-33,71;UBERON:0009618,2.06e-33,71;UBERON:0003077,1.29e-32,72;UBERON:0007285,1.29e-32,72;UBERON:0002385,1.38e-32,64;UBERON:0001015,1.38e-32,64;UBERON:0000383,1.38e-32,64;UBERON:0001134,1.85e-32,62;UBERON:0002036,1.85e-32,62;UBERON:0003082,1.85e-32,62;UBERON:0007503,8.99e-31,78;UBERON:0000486,5.63e-27,83;UBERON:0005256,2.75e-25,122;UBERON:0003104,4.58e-24,160;UBERON:0009142,4.58e-24,160;UBERON:0001637,2.18e-17,42;UBERON:0003509,2.18e-17,42;UBERON:0004572,2.18e-17,42;UBERON:0000490,1.21e-16,148;UBERON:0002100,1.75e-16,199;UBERON:0007500,2.18e-14,59;UBERON:0001981,2.18e-14,59;UBERON:0004537,2.18e-14,59;UBERON:0006965,2.18e-14,59;UBERON:0004872,3.77e-14,83;UBERON:0000926,6.19e-14,315;UBERON:0004120,6.19e-14,315;UBERON:0006603,6.19e-14,315;UBERON:0004573,6.88e-14,33;UBERON:0004571,6.88e-14,33;UBERON:0002049,2.27e-11,78;UBERON:0007798,2.27e-11,78;UBERON:0000055,9.92e-11,68;UBERON:0002204,9.65e-10,167;UBERON:0001009,1.30e-09,112;UBERON:0004535,2.10e-09,109;UBERON:0003914,2.52e-09,117;UBERON:0001135,3.40e-09,15;UBERON:0004237,8.07e-08,10;UBERON:0004695,8.07e-08,10;UBERON:0002111,8.07e-08,10;UBERON:0004178,8.07e-08,10 | |||
|phase1_expression=3.08853244759946,3.8538094300377,3.52386010239928,11.0080628188443,10.7270662662549,9.59572376510406,7.59899634504932,0.631719873426831,0.522371256399677,0.982935746006035,2.09340350391728,0,0.527533956456907,1.8564952944007,4.63956326019082,6.05092631806598,3.61616716814386,4.38186054232424,2.92759679274304,0.123121058076788,1.22400414746552,3.13454721478088,0.85870796139317,0.821246550437305,1.50651167513763,0,0,0,0,0,0,1.83884244895785,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,1.02290049474824,0.722878304769133,3.00802746381534,2.31754430337318,0,1.45990461090791,0.378139268656271,1.33037638477538,1.40535657109002,0.392937226493138,0,0,0.324547393654683,0,0,1.19245312152671,0,0,0,0,0.347140501607594,0,0,0.275118041940067,1.25396979922086,0,0,0,0,0,0,0,1.62028389576352,0.17859945656816,1.12264686313085,0.225222960966644,0,1.89853131913626,1.09921046358244,0,0,0.436094052142534,2.48485975847659,2.02608818663328,1.19168262731897,0.286836620748814,1.41867352879343,3.92474320099615,3.20246987189115,4.9333509683432,0.933633106199299,1.75123873690594,1.30769522490767,0,0.576175924479999,0.234321431833797,1.87296046098192,1.1409436430889,3.43731965269142,0.939475989150119,1.29498355494505,0.702254033511242,0.816616685019573,2.21101771161182,0.619954687054593,0,3.21447008062124,0.910161361938026,0,0.168336113954066,0.875829639103749,0,2.19488810440419,7.66219489497549,2.55404700141215,1.58805056424029,2.15267562826634,1.2813443329114,1.90738711043606,2.40072876867522,0.721367704669072,3.09168648054755,1.48893485065272,1.0126579934476,0.292311015483596,2.01947019395292,2.02509777013059,0.969876340912871,1.06502877754984,0.705264687593482,0.847802961552438,0.386521706326594,0,0.573609190778008,0,0.132529768321485,0.232387885739037,0.207322110030741,1.00928340350251,0.72995471815166,4.69348596989448,5.78916844373597,0,3.71494342425583,3.60939740834793,0.946454400318751,1.18009283054671,1.68707720918437,0.661763836394364,0.871517776369625,0.474541238222193,0.269662616320329,0.784885860501384,0.769494313892781,0,2.80483547606892,1.2347220339942,5.88034845542168,0,0,0,0,0,0.686271241194102,0,2.24803506515239,0,0.370353780634118,0.651616610620649,2.07986957055916,0,0.115930404975077,1.6437217193015,0,0,0,0,0,0,0,0.148631162288728,0.93733833986777,0.16798212819886,0.283550194484773,0.447792613514241,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0.224262168690721,0.43596006883328,0.07333828582095,3.49033632546,0,0,1.86156681609409,4.16029747645464,0.514414748524284,4.25547396069835,1.5985330740966,0.714889968290738,1.08524321078289,3.29296134712308,0.977208552881205,0,2.37585561880029,2.41151501647669,1.74306691720059,2.49932477955143,0,0,0,2.87549826589899,3.44585807502342,0,1.59259437334337,2.26023954805422,0.179060963239896,0,0,0,0.128343036279748,0.76228387266739,0,0,0.335032530668698,1.27587750330633,0,0,0,0.36807447515742,1.50051156317903,3.52644530809656,9.35868876888632,5.53129865271201,3.78485796081443,6.09135357962109,4.51419149591578,2.27407504055985,3.10419213877515,0.664225598535437,5.34670588770939,2.08520674723399,0,1.71571711905428,0,0,0,0,0,0,1.24053903909388,2.91577749247319,4.77122160536225,1.15325234330131,3.07024349440022,3.37793234401576,0,1.54209693802656,3.19611105563629,1.23190734020714,2.07701771673448,2.20799719073923,0,0.802025881213139,0,1.49258782613989,3.82391452814106,6.29397191805236,0,0,0,1.46139224653261,0,0,0.170093705276516,0.215915916102139,0,0.270946437543853,2.50844886927427,0.254876273045038,0,0.671624264166535,0,0,0.769350375349168,0.656029291399411,0.976135183992909,0,0.27470839445503,0.247528499761764,0,0.650060246036521,4.82051789532479,1.64340221096607,2.7728751080636,2.45605879561807,1.65403886981437,0.966782203814463,2.61030049045611,2.81247870473133,2.75999310504886,0,0,0.127612712494584,0.10115778085555,2.78907329578371,1.5740617341532,3.485186350803,3.38836938193698,1.06461206063404,3.47973196830029,8.15426564057248,5.15249592271168,0.744316738719335,1.2655176988749,4.95638504201945,1.79128453917934,1.71175595213568,1.27281299170375,7.06453776179307,2.33834194858309,1.64722217841633,2.23843564456804,3.03273722359974,14.2659289055707,5.89761838734574,0.975267478179181,2.43713489631284,5.28250733783777,1.22849920267187,3.53513579884282,7.910568163417,2.75682671773062,3.98063385144732,8.33056681982149,4.05142873986681,3.27947376023316,8.52223583243357,8.675057946793,9.57765048609621,1.00387946542836,3.04572027140676,9.98678944147501,1.77380532035299,0.844430541190656,1.31717957183961,1.51789269506286,1.39973888097993,0.288666338176536,1.34060455107157,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.293016358543788,0.970884173996107,0,0.852408440419239,0,0,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| ||
|short_description=p@chr9:35689148..35689192,+ | |||
}} | }} |
Latest revision as of 01:48, 1 August 2015
Short description: | p@chr9:35689148..35689192, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:35689148..35689192, + |
Coexpression cluster: | C638_skeletal_tongue_Adipocyte_diaphragm_penis_throat_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.77e-28 | 58 |
myoblast | 1.77e-28 | 58 |
multi-potent skeletal muscle stem cell | 1.77e-28 | 58 |
muscle cell | 2.14e-28 | 55 |
smooth muscle cell | 1.25e-26 | 43 |
smooth muscle myoblast | 1.25e-26 | 43 |
electrically responsive cell | 9.56e-25 | 61 |
electrically active cell | 9.56e-25 | 61 |
vascular associated smooth muscle cell | 1.48e-22 | 32 |
mesodermal cell | 2.56e-16 | 121 |
fibroblast | 2.11e-09 | 76 |
aortic smooth muscle cell | 8.07e-08 | 10 |
multi fate stem cell | 1.55e-07 | 427 |
somatic stem cell | 2.78e-07 | 433 |
stem cell | 9.04e-07 | 441 |