FFCP PHASE1:Hg19::chrX:71091308..71091337,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chrX:71091308..71091337,- to FFCP PHASE1:Hg19::chrX:71091308..71091337,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chrX:71091308..71091337,- | |||
|description=CAGE_peak_at_chrX:71091308..71091337,- | |||
|id=chrX:71091308..71091337,- | |||
|ontology_enrichment_celltype=CL:1000507!5.65e-08!12;CL:1000494!5.65e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:1000507;5.05e-15;10!CL:1000494;5.05e-15;10!CL:0002603;2.21e-10;3!CL:1000449;1.18e-09;15!CL:1000497;2.15e-08;17!CL:0002518;2.15e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,4.23e-15,10;CL:1000494,4.23e-15,10;CL:0002603,1.92e-10,3;CL:1000449,1.05e-09,15;CL:1000497,1.95e-08,17;CL:0002518,1.95e-08,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!3.99e-16!86;UBERON:0007284!3.99e-16!86;UBERON:0000956!5.22e-15!25;UBERON:0000203!5.22e-15!25;UBERON:0002346!8.57e-15!90;UBERON:0001869!1.99e-14!32;UBERON:0002619!2.13e-14!22;UBERON:0000033!5.58e-14!123;UBERON:0003056!9.01e-14!61;UBERON:0000153!3.54e-13!129;UBERON:0007811!3.54e-13!129;UBERON:0001893!3.59e-13!34;UBERON:0001950!1.80e-12!20;UBERON:0002791!1.88e-12!33;UBERON:0002020!6.77e-12!34;UBERON:0003528!6.77e-12!34;UBERON:0002780!7.76e-12!41;UBERON:0001890!7.76e-12!41;UBERON:0006240!7.76e-12!41;UBERON:0003080!2.22e-11!42;UBERON:0001049!6.32e-11!57;UBERON:0005068!6.32e-11!57;UBERON:0006241!6.32e-11!57;UBERON:0007135!6.32e-11!57;UBERON:0000955!1.76e-10!69;UBERON:0006238!1.76e-10!69;UBERON:0002616!2.91e-10!59;UBERON:0000483!5.13e-10!309;UBERON:0000025!6.59e-10!194;UBERON:0000119!1.08e-09!312;UBERON:0005743!3.24e-09!86;UBERON:0000064!6.49e-09!219;UBERON:0001017!6.50e-09!82;UBERON:0004121!2.16e-08!169;UBERON:0000073!4.15e-08!94;UBERON:0001016!4.15e-08!94;UBERON:0009773!5.65e-08!12;UBERON:0001231!5.65e-08!12;UBERON:0004810!5.65e-08!12;UBERON:0000924!7.24e-08!173;UBERON:0006601!7.24e-08!173;UBERON:0000475!8.53e-08!365;UBERON:0000200!1.63e-07!6;UBERON:0004111!2.72e-07!241;UBERON:0000481!5.08e-07!347;UBERON:0000349!5.30e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;5.05e-15;10!UBERON:0009773;5.05e-15;10!UBERON:0001231;5.05e-15;10!UBERON:0004810;5.05e-15;10!UBERON:0002619;1.26e-11;22!UBERON:0001950;2.22e-10;20!UBERON:0000956;4.72e-10;25!UBERON:0000203;4.72e-10;25!UBERON:0006555;1.18e-09;15!UBERON:0004819;1.18e-09;15!UBERON:0001285;1.18e-09;15!UBERON:0007684;1.18e-09;15!UBERON:0001871;1.45e-07;6!UBERON:0001876;2.25e-07;2!UBERON:0002360;2.25e-07;2!UBERON:0000094;2.25e-07;2!UBERON:0010743;2.25e-07;2!UBERON:0001869;4.60e-07;32!UBERON:0002791;4.80e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,4.23e-15,10;UBERON:0002619,1.17e-11,22;UBERON:0001950,2.14e-10,20;UBERON:0000956,4.42e-10,25;UBERON:0000203,4.42e-10,25;UBERON:0004211,1.05e-09,15;UBERON:0009773,1.05e-09,15;UBERON:0001231,1.05e-09,15;UBERON:0001285,1.05e-09,15;UBERON:0007684,1.05e-09,15;UBERON:0004208,1.05e-09,15;UBERON:0006555,4.97e-09,16;UBERON:0004819,4.97e-09,16;UBERON:0000073,4.09e-08,53;UBERON:0002616,4.09e-08,53;UBERON:0001017,9.28e-08,81;UBERON:0001871,1.25e-07,6;UBERON:0000955,1.37e-07,68;UBERON:0006238,1.37e-07,68;UBERON:0001016,1.57e-07,89;UBERON:0001049,1.57e-07,56;UBERON:0005068,1.57e-07,56;UBERON:0006241,1.57e-07,56;UBERON:0007135,1.57e-07,56;UBERON:0002791,1.57e-07,32;UBERON:0001869,1.57e-07,32;UBERON:0001876,1.84e-07,2;UBERON:0010314,3.26e-07,132;UBERON:0002360,3.36e-07,2;UBERON:0000094,3.36e-07,2;UBERON:0010743,3.36e-07,2;UBERON:0000025,4.16e-07,192;UBERON:0003528,5.44e-07,34;UBERON:0002020,5.44e-07,34;UBERON:0001893,5.44e-07,34 | |||
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| ||
|short_description=p@chrX:71091308..71091337,- | |||
}} | }} |
Latest revision as of 09:24, 1 August 2015
Short description: | p@chrX:71091308..71091337, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:71091308..71091337, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 4.23e-15 | 10 |
nephron tubule epithelial cell | 4.23e-15 | 10 |
astrocyte of the cerebellum | 1.92e-10 | 3 |
epithelial cell of nephron | 1.05e-09 | 15 |
kidney cell | 1.95e-08 | 17 |
kidney epithelial cell | 1.95e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 4.23e-15 | 10 |
regional part of cerebral cortex | 1.17e-11 | 22 |
neocortex | 2.14e-10 | 20 |
cerebral cortex | 4.42e-10 | 25 |
pallium | 4.42e-10 | 25 |
nephron epithelium | 1.05e-09 | 15 |
renal tubule | 1.05e-09 | 15 |
nephron tubule | 1.05e-09 | 15 |
nephron | 1.05e-09 | 15 |
uriniferous tubule | 1.05e-09 | 15 |
nephrogenic mesenchyme | 1.05e-09 | 15 |
excretory tube | 4.97e-09 | 16 |
kidney epithelium | 4.97e-09 | 16 |
regional part of nervous system | 4.09e-08 | 53 |
regional part of brain | 4.09e-08 | 53 |
central nervous system | 9.28e-08 | 81 |
temporal lobe | 1.25e-07 | 6 |
brain | 1.37e-07 | 68 |
future brain | 1.37e-07 | 68 |
nervous system | 1.57e-07 | 89 |
neural tube | 1.57e-07 | 56 |
neural rod | 1.57e-07 | 56 |
future spinal cord | 1.57e-07 | 56 |
neural keel | 1.57e-07 | 56 |
regional part of telencephalon | 1.57e-07 | 32 |
cerebral hemisphere | 1.57e-07 | 32 |
amygdala | 1.84e-07 | 2 |
structure with developmental contribution from neural crest | 3.26e-07 | 132 |
meninx | 3.36e-07 | 2 |
membrane organ | 3.36e-07 | 2 |
meningeal cluster | 3.36e-07 | 2 |
tube | 4.16e-07 | 192 |
brain grey matter | 5.44e-07 | 34 |
gray matter | 5.44e-07 | 34 |
telencephalon | 5.44e-07 | 34 |