FFCP PHASE1:Mm9::chr10:79567079..79567121,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:79567079..79567121,- | |||
|description=CAGE_peak_at_chr10:79567079..79567121,- | |||
|id=chr10:79567079..79567121,- | |||
|ontology_enrichment_celltype=CL:0000222!4.33e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.56e-12,7;CL:0000680,4.04e-11,6;CL:0000187,4.04e-11,6;CL:0000056,4.04e-11,6;CL:0000066,1.43e-09,25;CL:0002076,2.83e-08,15;CL:0000473,7.71e-08,7;CL:0000223,4.29e-07,20;CL:0000355,4.64e-07,9;CL:0000192,9.55e-07,3;CL:0000359,9.55e-07,3;CL:0002539,9.55e-07,3;CL:0000514,9.55e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,2.76e-09,5;UBERON:0007500,2.76e-09,5;UBERON:0001981,2.76e-09,5;UBERON:0002049,2.76e-09,5;UBERON:0007798,2.76e-09,5;UBERON:0004537,2.76e-09,5;UBERON:0006965,2.76e-09,5;UBERON:0000947,7.10e-08,4;UBERON:0001637,7.10e-08,4;UBERON:0004573,7.10e-08,4;UBERON:0003509,7.10e-08,4;UBERON:0004571,7.10e-08,4;UBERON:0010191,7.10e-08,4;UBERON:0004572,7.10e-08,4;UBERON:0000072,1.17e-07,27;UBERON:0003081,1.22e-07,87;UBERON:0002193,1.55e-07,48;UBERON:0002405,1.55e-07,48;UBERON:0001134,4.64e-07,9;UBERON:0002036,4.64e-07,9;UBERON:0002385,4.64e-07,9;UBERON:0000486,4.64e-07,9;UBERON:0007503,4.64e-07,9;UBERON:0001015,4.64e-07,9;UBERON:0002329,4.64e-07,9;UBERON:0003082,4.64e-07,9;UBERON:0003059,4.64e-07,9;UBERON:0007282,4.64e-07,9;UBERON:0004290,4.64e-07,9;UBERON:0009618,4.64e-07,9;UBERON:0001135,9.55e-07,3;UBERON:0004237,9.55e-07,3;UBERON:0004695,9.55e-07,3;UBERON:0002111,9.55e-07,3;UBERON:0004178,9.55e-07,3 | |||
|phase1_expression=0,32.4547129104606,35.0349414329943,0,0.500895729946347,17.9630820945722,17.0537227634734,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.255129870453209,0.397163804803541,0,18.7191134668286,15.8292403936347,25.8404383851759,29.7225777349762,31.8897424375116,0,0,11.3082560434205,0,0,0,0,0,0,0,0,0,0,0,0,32.2295854017478,35.1777951331715,26.2471855591205,1.56478268869608,0,0.878744730937887,0.58328969722285,0.699932108126813,0,0,0,0,10.5476368774738,5.15760191889762,10.8291139378263,0,0,0,0,0,5.84934816232909,2.96659908770092,4.9733608046227,1.19840044207362,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4387976733305,0.529000920747499,6.66688324013859,0,0.679971333707751,0,0,0,0.140444420131752,10.5666799998396,6.49465011507172,7.42013106471715,0,2.56652954828636,5.09610479413291,0,7.79367747640371,8.36087556067825,10.1104889002957,0.34255163915718,10.616453229534,1.48442139064825,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0.376999773989026,2.71914464507811,1.87979163995885,0.884610551949874,0.485300549842228,0.662524555381181,0.484875253135222,0,0,0,0.510914110417183,0,0,0.127070227073065,0,0,0,0,0,0,0,0.101839363850316,1.24406970610093,0.252722758433675,0.210441855886474,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0.655453258862952,0.345369963731791,0.433947175744535,0,1.08781136763742,0.491764273019036,0.275936746304732,0.160550589987792,0,5.08198330667694,0,0,0,0,0,0,0,0.404810701674894,0,0.395287777946524,0,1.41940085208269,0.178065603667255,0,0.824850614862677,1.32745138339963,0,0,0,0,0.614870295887855,0,0,0,0.632073515871632,0,2.06271086496374,0,0,0,0,0,0,0,0,3.52007562095566,2.33015277950202,0.441056796109924,2.14352128823924,0,0.180938774784468,0.358117032009409,0.492422699235184,0,0,0.341741761595705,0,0,0.376736914009382,0.27338845544205,0.228778173206523,0,0,0,0,0,0,0,0.627264888043406,0,0,0.330613822901344,0.523511883968059,0.129614973291793,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0.202725215290164,0.410843828659309,0.25984164595559,0.537080087002444,1.19208812868759,1.32214994471966,0.738447635872886,1.81739609906666,1.21930890648,1.41156659191577,1.55932609183604,1.34696578296461,1.05189211963412,0.226730383615211,0.221985953374065,0.538283139656854,1.00730769818447,0.19318959403219,3.56596703357246,0.549454872801795,6.43105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.64183841918363,0,0.25347929989024,0,0,0.128050304809739,0.114870937911227,0,0.347652977834566,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0,0.145346416632329,0.470546902076653,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.593175090620871,0,0,0.309873682371932,0,0.499621155875892,0,0.429742108096597,0.191288332068843,0.441182838239031,1.15933917810211 | |phase1_expression=0,32.4547129104606,35.0349414329943,0,0.500895729946347,17.9630820945722,17.0537227634734,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.255129870453209,0.397163804803541,0,18.7191134668286,15.8292403936347,25.8404383851759,29.7225777349762,31.8897424375116,0,0,11.3082560434205,0,0,0,0,0,0,0,0,0,0,0,0,32.2295854017478,35.1777951331715,26.2471855591205,1.56478268869608,0,0.878744730937887,0.58328969722285,0.699932108126813,0,0,0,0,10.5476368774738,5.15760191889762,10.8291139378263,0,0,0,0,0,5.84934816232909,2.96659908770092,4.9733608046227,1.19840044207362,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4387976733305,0.529000920747499,6.66688324013859,0,0.679971333707751,0,0,0,0.140444420131752,10.5666799998396,6.49465011507172,7.42013106471715,0,2.56652954828636,5.09610479413291,0,7.79367747640371,8.36087556067825,10.1104889002957,0.34255163915718,10.616453229534,1.48442139064825,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0.376999773989026,2.71914464507811,1.87979163995885,0.884610551949874,0.485300549842228,0.662524555381181,0.484875253135222,0,0,0,0.510914110417183,0,0,0.127070227073065,0,0,0,0,0,0,0,0.101839363850316,1.24406970610093,0.252722758433675,0.210441855886474,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0.655453258862952,0.345369963731791,0.433947175744535,0,1.08781136763742,0.491764273019036,0.275936746304732,0.160550589987792,0,5.08198330667694,0,0,0,0,0,0,0,0.404810701674894,0,0.395287777946524,0,1.41940085208269,0.178065603667255,0,0.824850614862677,1.32745138339963,0,0,0,0,0.614870295887855,0,0,0,0.632073515871632,0,2.06271086496374,0,0,0,0,0,0,0,0,3.52007562095566,2.33015277950202,0.441056796109924,2.14352128823924,0,0.180938774784468,0.358117032009409,0.492422699235184,0,0,0.341741761595705,0,0,0.376736914009382,0.27338845544205,0.228778173206523,0,0,0,0,0,0,0,0.627264888043406,0,0,0.330613822901344,0.523511883968059,0.129614973291793,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0.202725215290164,0.410843828659309,0.25984164595559,0.537080087002444,1.19208812868759,1.32214994471966,0.738447635872886,1.81739609906666,1.21930890648,1.41156659191577,1.55932609183604,1.34696578296461,1.05189211963412,0.226730383615211,0.221985953374065,0.538283139656854,1.00730769818447,0.19318959403219,3.56596703357246,0.549454872801795,6.43105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.64183841918363,0,0.25347929989024,0,0,0.128050304809739,0.114870937911227,0,0.347652977834566,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0,0.145346416632329,0.470546902076653,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.593175090620871,0,0,0.309873682371932,0,0.499621155875892,0,0.429742108096597,0.191288332068843,0.441182838239031,1.15933917810211 | ||
|short_description=p@chr10:79567079..79567121,- | |||
}} | }} |
Latest revision as of 19:16, 4 August 2015
Short description: | p@chr10:79567079..79567121, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:79567079..79567121, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.56e-12 | 7 |
muscle precursor cell | 4.04e-11 | 6 |
muscle cell | 4.04e-11 | 6 |
myoblast | 4.04e-11 | 6 |
epithelial cell | 1.43e-09 | 25 |
endo-epithelial cell | 2.83e-08 | 15 |
defensive cell | 7.71e-08 | 7 |
endodermal cell | 4.29e-07 | 20 |
multi-potent skeletal muscle stem cell | 4.64e-07 | 9 |
smooth muscle cell | 9.55e-07 | 3 |
vascular associated smooth muscle cell | 9.55e-07 | 3 |
aortic smooth muscle cell | 9.55e-07 | 3 |
smooth muscle myoblast | 9.55e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vessel | 2.76e-09 | 5 |
epithelial tube open at both ends | 2.76e-09 | 5 |
blood vessel | 2.76e-09 | 5 |
vasculature | 2.76e-09 | 5 |
vascular system | 2.76e-09 | 5 |
blood vasculature | 2.76e-09 | 5 |
vascular cord | 2.76e-09 | 5 |
aorta | 7.10e-08 | 4 |
artery | 7.10e-08 | 4 |
systemic artery | 7.10e-08 | 4 |
arterial blood vessel | 7.10e-08 | 4 |
systemic arterial system | 7.10e-08 | 4 |
aortic system | 7.10e-08 | 4 |
arterial system | 7.10e-08 | 4 |
segment of respiratory tract | 1.17e-07 | 27 |
lateral plate mesoderm | 1.22e-07 | 87 |
hemolymphoid system | 1.55e-07 | 48 |
immune system | 1.55e-07 | 48 |
skeletal muscle tissue | 4.64e-07 | 9 |
striated muscle tissue | 4.64e-07 | 9 |
muscle tissue | 4.64e-07 | 9 |
multilaminar epithelium | 4.64e-07 | 9 |
epithelial vesicle | 4.64e-07 | 9 |
musculature | 4.64e-07 | 9 |
somite | 4.64e-07 | 9 |
myotome | 4.64e-07 | 9 |
presomitic mesoderm | 4.64e-07 | 9 |
presumptive segmental plate | 4.64e-07 | 9 |
dermomyotome | 4.64e-07 | 9 |
trunk paraxial mesoderm | 4.64e-07 | 9 |
smooth muscle tissue | 9.55e-07 | 3 |
blood vessel smooth muscle | 9.55e-07 | 3 |
arterial system smooth muscle | 9.55e-07 | 3 |
artery smooth muscle tissue | 9.55e-07 | 3 |
aorta smooth muscle tissue | 9.55e-07 | 3 |