Personal tools

FFCP PHASE1:Mm9::chr11:86358484..86358501,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr11:86358484..86358501,+
|DHSsupport=NA
|short_description=p3@Tubd1
|DPIdataset=NA
|description=CAGE_peak_3_at_Tubd1_5end
|association_with_transcript=0bp_to_ENSMUST00000020821,ENSMUST00000069503,ENSMUST00000108030,NM_001199045,NM_001199046,NM_001199047,NM_019756,uc007ksr.1,uc007kss.1,uc007kst.2,uc007ksu.2_5end
|EntrezGene=56427
|EntrezGene=56427
|HGNC=
|HGNC=
|MCL_coexpression_id=381
|TSSclassifier=NA
|UniProt=Q8CDD3,Q9R1K7,Q5SWF8
|UniProt=Q8CDD3,Q9R1K7,Q5SWF8
|association_with_transcript=0bp_to_ENSMUST00000020821,ENSMUST00000069503,ENSMUST00000108030,NM_001199045,NM_001199046,NM_001199047,NM_019756,uc007ksr.1,uc007kss.1,uc007kst.2,uc007ksu.2_5end
|cluster_id=chr11:86358484..86358501,+
|description=CAGE_peak_3_at_Tubd1_5end
|id=chr11:86358484..86358501,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0000077,2.29e-07,35
|phase1_expression=0.80074423552397,0.697950815278722,0.454999239389536,0.90739263392049,0.500895729946347,1.51091344720701,1.16806320297763,1.93684985162364,0.422366166455,0.468129052643987,0.171217968225505,0.159544317990673,1.54080656938085,2.44777126773193,1.99865857089398,2.42970320867791,1.39912375625629,2.20823515750766,2.60517423850904,2.97072756258621,4.59233766815777,2.48227378002213,1.56719873483361,0.639969691173627,1.14704640533585,0.57423196411502,1.29228598847722,0.861884930743556,1.14014051673824,3.02436155711917,1.55211357458713,1.27006134691926,1.23012957516914,15.8481681015439,4.33277429626912,2.65975432573588,2.45003227514843,1.67412652294763,0.7813353445238,0.523523743973798,0,2.04913645487534,0,1.25896817975577,1.01376931219515,0,0,0.436050312760893,0.439372365468944,0.388859798148567,0.279972843250725,0,1.17447824240415,0,0,1.02903774414379,0.573066879877513,0.515672092277442,0.202316460859598,0,0,0,0.889294796111139,0,0,0.7104801149461,0,0,0.414758449233911,0.405017814995072,0.420649922702764,0.571301968807607,0.441737081903227,0.122490799214954,0.0958454710182364,0,2.20231761998777,0.893811366596314,0.46081959976873,0.131886287730194,0.365950574409639,0,0.558365998002762,0,1.37518422999129,0.589257170947335,0.569486723196412,0.186399445825301,1.13589289999776,0.982430281388212,1.15945795480671,0.860423876981386,0,1.07940638327563,1.94932925234301,1.34408066129201,1.26399978118577,1.36344258062446,0.779358013808606,1.06001872353102,2.39433813620357,1.28326477414318,0,7.11066703153331,0.649473123033642,0.506719730950197,1.51657333504435,1.37020655662872,5.43769555659061,0.742210695324124,0.520455980298408,1.21786191324856,0.922461989024234,1.05505848386836,0.823120949949934,1.63366568728578,0.988779870937496,2.31358971071859,0,0.485300549842228,1.98757366614354,0.969750506270444,0,0.878342391034642,0.209446706813455,1.02182822083437,1.43778149407104,1.79970819298022,0.762421362438388,0.299581278809645,0.457500602818626,0.502617408451458,0.695297280769106,1.79000820131231,0.62336413367868,0.811206315338788,0.712875546952214,2.61254638281195,1.51633655060205,3.15662783829711,1.04096354370163,0.689706313300419,0.180062129805349,0.753524089178575,0.408218994907967,0.512454881139399,1.3118241438362,0.776110112217047,0.862271971731369,1.13463648100692,1.23165786914764,0.657587197282725,0.278047249225598,0,1.02891068203972,0.995171334092466,0,0.257347907114715,0.568326998791185,1.03562886267751,0.938104239924385,1.62055855314913,0.946978942340841,2.16440654922144,2.77680803197281,1.62773761325285,3.21928081679543,1.28441876603886,0.987359099480883,2.13417703302824,2.26992666728396,1.90059983652932,1.09775057645525,1.47627060636409,1.05144974282064,0.205809224758569,0.330418782983798,0.793351699990633,0.426576501070468,1.39342003116263,0.257734922644187,0.80673409849337,0.889512175379481,0.570676878337677,0.949058123089023,1.64698954724011,1.25667604400135,1.1937388322469,0.974820435595601,0.898819408654221,0.648414149624083,0.995706366271836,0.758671603812327,1.48523066392647,1.1270773567308,0.407302655690628,0.387904974335251,0.49095073923223,1.01178459398812,1.32849133181642,2.19798218977925,1.48076596706161,2.37162101669719,2.33583148002532,2.35870794135844,2.24862112384854,2.63718157805054,1.92941727801933,0.50925170356284,1.72617682470486,0.810676133875177,0,1.43768206527355,1.11642284300551,0.936113019343682,1.51547326768267,2.69096120282868,0.964887042726734,0.369506380333209,0.947457058852424,0.814824882210129,0.678980343100753,0.704070744865506,1.67506257441816,0.952174563544055,0.975668239288994,0.315270288212382,0.44292937929755,1.2756381492599,1.14704320301017,1.55416483679306,1.59113964439663,0,1.63171705145613,1.47529281905711,1.37968373152366,1.12385412991454,1.28932855251423,0.327869890753351,2.27223834483936,0.94652465824877,0.780877488593277,0.861693590931196,1.67278158566786,0.445597348164788,1.98153571552183,2.02405350837447,0.876767573733936,0.790575555893047,0.321321316421807,0.425820255624806,1.06839362200353,0.325773918707152,0.659880491890142,2.65490276679926,0.728341908464944,0.604647113929502,1.50884063804718,0.590603785761546,2.15204603560749,1.03371317267288,0.727067458955011,1.42598951353889,3.16036757935816,2.10837217149998,0,1.70219802876894,1.26042765821917,0.905510786479282,0.857348140126369,1.59606210278046,0.713475270408282,1.64549020602121,1.2178597964584,1.87737366450968,1.48282449604674,1.54369878638473,2.63818004706368,0.645857706783622,1.62844897306021,0.716234064018819,0.656563598980245,1.1659233465194,0.370850604021019,1.36696704638282,0.619160603889667,1.85194527369712,3.20226376907975,3.69074414846768,2.74533807847827,0.169978429993855,0.279902904647316,0.276399947608848,0.954670618015114,1.73984796469624,0.406638934253697,1.18805874903981,0.418176592028937,1.31017538247707,1.21377911746339,0.165306911450672,1.04702376793612,1.42576470620972,2.4853572523477,22.5477175473676,0.598066184175915,0.66183396182839,0.777804753376191,1.16243841129958,0.675824501963113,0.117357238645754,0.651021924219751,0.943734099831398,7.24752362478018,12.9613502816039,3.16011120628178,2.22997736819181,1.23253148597793,2.07873316764472,1.9692936523423,1.58945083825012,2.52410443991935,1.18151621739662,1.61546319917036,1.5241361331,2.21817607301049,2.33898913775406,2.40529604100824,1.98690733708667,2.26730383615211,1.10992976687032,1.25599399253266,1.00730769818447,1.9318959403219,0.93841237725591,0.73260649706906,1.07184189539533,1.50471631210609,0,1.38097570952153,0,1.3748254587495,1.37016503954128,0,2.02506750069542,0.45032120322422,0.453142408984205,0.51776031175182,1.03787347584177,0,0.512200817262403,1.21553358534147,1.04806581313991,0.367687016900028,1.55572709461131,0.412070114477788,0.64183841918363,1.26348605881899,0.760437899670719,0.565879024158229,1.31098110457835,1.34452820050225,1.55075766180156,0,0.927074607558844,0.964546102318525,0.412085900803307,0.294397840268795,0.342869252385415,1.77475806159337,1.90748951957857,1.0174249164263,2.07040636913727,1.4384483341585,0.73171189149109,0.526139422875686,1.49384525230448,0.561142271657738,0.830445126869219,0.394017929502254,0.818462086339379,0.309873682371932,1.15743966588685,0.499621155875892,0.701794825336225,1.28922632428979,0,1.10295709559758,1.62307484934295
|phase1_expression=0.80074423552397,0.697950815278722,0.454999239389536,0.90739263392049,0.500895729946347,1.51091344720701,1.16806320297763,1.93684985162364,0.422366166455,0.468129052643987,0.171217968225505,0.159544317990673,1.54080656938085,2.44777126773193,1.99865857089398,2.42970320867791,1.39912375625629,2.20823515750766,2.60517423850904,2.97072756258621,4.59233766815777,2.48227378002213,1.56719873483361,0.639969691173627,1.14704640533585,0.57423196411502,1.29228598847722,0.861884930743556,1.14014051673824,3.02436155711917,1.55211357458713,1.27006134691926,1.23012957516914,15.8481681015439,4.33277429626912,2.65975432573588,2.45003227514843,1.67412652294763,0.7813353445238,0.523523743973798,0,2.04913645487534,0,1.25896817975577,1.01376931219515,0,0,0.436050312760893,0.439372365468944,0.388859798148567,0.279972843250725,0,1.17447824240415,0,0,1.02903774414379,0.573066879877513,0.515672092277442,0.202316460859598,0,0,0,0.889294796111139,0,0,0.7104801149461,0,0,0.414758449233911,0.405017814995072,0.420649922702764,0.571301968807607,0.441737081903227,0.122490799214954,0.0958454710182364,0,2.20231761998777,0.893811366596314,0.46081959976873,0.131886287730194,0.365950574409639,0,0.558365998002762,0,1.37518422999129,0.589257170947335,0.569486723196412,0.186399445825301,1.13589289999776,0.982430281388212,1.15945795480671,0.860423876981386,0,1.07940638327563,1.94932925234301,1.34408066129201,1.26399978118577,1.36344258062446,0.779358013808606,1.06001872353102,2.39433813620357,1.28326477414318,0,7.11066703153331,0.649473123033642,0.506719730950197,1.51657333504435,1.37020655662872,5.43769555659061,0.742210695324124,0.520455980298408,1.21786191324856,0.922461989024234,1.05505848386836,0.823120949949934,1.63366568728578,0.988779870937496,2.31358971071859,0,0.485300549842228,1.98757366614354,0.969750506270444,0,0.878342391034642,0.209446706813455,1.02182822083437,1.43778149407104,1.79970819298022,0.762421362438388,0.299581278809645,0.457500602818626,0.502617408451458,0.695297280769106,1.79000820131231,0.62336413367868,0.811206315338788,0.712875546952214,2.61254638281195,1.51633655060205,3.15662783829711,1.04096354370163,0.689706313300419,0.180062129805349,0.753524089178575,0.408218994907967,0.512454881139399,1.3118241438362,0.776110112217047,0.862271971731369,1.13463648100692,1.23165786914764,0.657587197282725,0.278047249225598,0,1.02891068203972,0.995171334092466,0,0.257347907114715,0.568326998791185,1.03562886267751,0.938104239924385,1.62055855314913,0.946978942340841,2.16440654922144,2.77680803197281,1.62773761325285,3.21928081679543,1.28441876603886,0.987359099480883,2.13417703302824,2.26992666728396,1.90059983652932,1.09775057645525,1.47627060636409,1.05144974282064,0.205809224758569,0.330418782983798,0.793351699990633,0.426576501070468,1.39342003116263,0.257734922644187,0.80673409849337,0.889512175379481,0.570676878337677,0.949058123089023,1.64698954724011,1.25667604400135,1.1937388322469,0.974820435595601,0.898819408654221,0.648414149624083,0.995706366271836,0.758671603812327,1.48523066392647,1.1270773567308,0.407302655690628,0.387904974335251,0.49095073923223,1.01178459398812,1.32849133181642,2.19798218977925,1.48076596706161,2.37162101669719,2.33583148002532,2.35870794135844,2.24862112384854,2.63718157805054,1.92941727801933,0.50925170356284,1.72617682470486,0.810676133875177,0,1.43768206527355,1.11642284300551,0.936113019343682,1.51547326768267,2.69096120282868,0.964887042726734,0.369506380333209,0.947457058852424,0.814824882210129,0.678980343100753,0.704070744865506,1.67506257441816,0.952174563544055,0.975668239288994,0.315270288212382,0.44292937929755,1.2756381492599,1.14704320301017,1.55416483679306,1.59113964439663,0,1.63171705145613,1.47529281905711,1.37968373152366,1.12385412991454,1.28932855251423,0.327869890753351,2.27223834483936,0.94652465824877,0.780877488593277,0.861693590931196,1.67278158566786,0.445597348164788,1.98153571552183,2.02405350837447,0.876767573733936,0.790575555893047,0.321321316421807,0.425820255624806,1.06839362200353,0.325773918707152,0.659880491890142,2.65490276679926,0.728341908464944,0.604647113929502,1.50884063804718,0.590603785761546,2.15204603560749,1.03371317267288,0.727067458955011,1.42598951353889,3.16036757935816,2.10837217149998,0,1.70219802876894,1.26042765821917,0.905510786479282,0.857348140126369,1.59606210278046,0.713475270408282,1.64549020602121,1.2178597964584,1.87737366450968,1.48282449604674,1.54369878638473,2.63818004706368,0.645857706783622,1.62844897306021,0.716234064018819,0.656563598980245,1.1659233465194,0.370850604021019,1.36696704638282,0.619160603889667,1.85194527369712,3.20226376907975,3.69074414846768,2.74533807847827,0.169978429993855,0.279902904647316,0.276399947608848,0.954670618015114,1.73984796469624,0.406638934253697,1.18805874903981,0.418176592028937,1.31017538247707,1.21377911746339,0.165306911450672,1.04702376793612,1.42576470620972,2.4853572523477,22.5477175473676,0.598066184175915,0.66183396182839,0.777804753376191,1.16243841129958,0.675824501963113,0.117357238645754,0.651021924219751,0.943734099831398,7.24752362478018,12.9613502816039,3.16011120628178,2.22997736819181,1.23253148597793,2.07873316764472,1.9692936523423,1.58945083825012,2.52410443991935,1.18151621739662,1.61546319917036,1.5241361331,2.21817607301049,2.33898913775406,2.40529604100824,1.98690733708667,2.26730383615211,1.10992976687032,1.25599399253266,1.00730769818447,1.9318959403219,0.93841237725591,0.73260649706906,1.07184189539533,1.50471631210609,0,1.38097570952153,0,1.3748254587495,1.37016503954128,0,2.02506750069542,0.45032120322422,0.453142408984205,0.51776031175182,1.03787347584177,0,0.512200817262403,1.21553358534147,1.04806581313991,0.367687016900028,1.55572709461131,0.412070114477788,0.64183841918363,1.26348605881899,0.760437899670719,0.565879024158229,1.31098110457835,1.34452820050225,1.55075766180156,0,0.927074607558844,0.964546102318525,0.412085900803307,0.294397840268795,0.342869252385415,1.77475806159337,1.90748951957857,1.0174249164263,2.07040636913727,1.4384483341585,0.73171189149109,0.526139422875686,1.49384525230448,0.561142271657738,0.830445126869219,0.394017929502254,0.818462086339379,0.309873682371932,1.15743966588685,0.499621155875892,0.701794825336225,1.28922632428979,0,1.10295709559758,1.62307484934295
|short_description=p3@Tubd1
}}
}}

Latest revision as of 21:31, 25 September 2015

Short description:p3@Tubd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Tubd1_5end
Coexpression cluster:MCL_coexpression_mm9:381
Association with transcript: 0bp_to_ENSMUST00000020821, ENSMUST00000069503, ENSMUST00000108030, NM_001199045, NM_001199046, NM_001199047, NM_019756, uc007ksr.1, uc007kss.1, uc007kst.2, uc007ksu.2_5end
EntrezGene:Tubd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Tubd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.54
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.45
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.43
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.21
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.61
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.97
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C13.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.33
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.45
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D91.14
Mouse Schwann, donor2.CNhs12573.11746-123F90.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H95.44
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H12.31
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.44
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.61
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G43.16
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C82.16
heart, embryo E16.CNhs11021.457-17C62.78
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G33.22
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G12.13
heart, neonate N16.CNhs11209.782-15G12.27
heart, neonate N20.CNhs11127.821-26I61.90
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F81.49
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D51.01
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F32.20
kidney, neonate N30.CNhs11203.1385-42H11.48
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F82.34
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D72.64
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H12.69
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H21.59
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A31.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C32.64
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H31.63
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F21.85
spleen, neonate N10.CNhs11116.752-24D13.20
spleen, neonate N20.CNhs11112.824-19H13.69
spleen, neonate N25.CNhs11099.1354-25G32.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.74
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G522.55
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H37.25
testis, neonate N30.CNhs11130.1391-42E212.96
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I42.23
thymus, embryo E15.CNhs11005.430-45I21.23
thymus, embryo E16.CNhs11002.456-26C52.08
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F82.52
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C41.62
thymus, neonate N07.CNhs11211.713-19D31.52
thymus, neonate N10.CNhs11194.748-24E42.22
thymus, neonate N20.CNhs11186.820-7A22.34
thymus, neonate N25.CNhs11125.1362-25G72.41
thymus, neonate N30.CNhs11132.1393-42G21.99
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.26
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E41.93
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
mixed endoderm/mesoderm-derived structure2.29e-0735
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:86358484..86358501,%2B&oldid=4215237"