FFCP PHASE1:Mm9::chr13:97419784..97419792,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr13:97419784..97419792,- to FFCP PHASE1:Mm9::chr13:97419784..97419792,-: NSchange) |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:97419784..97419792,- | |||
|description=CAGE_peak_at_chr13:97419784..97419792,- | |||
|id=chr13:97419784..97419792,- | |||
|ontology_enrichment_celltype=CL:0000221!4.91e-17!44;CL:0000133!4.91e-17!44;CL:0000117!9.36e-17!23;CL:0000337!9.36e-17!23;CL:0002319!6.87e-16!43;CL:0000540!8.58e-16!33;CL:0000047!8.58e-16!33;CL:0000031!8.58e-16!33;CL:0000404!8.58e-16!33;CL:0000055!1.63e-12!50;CL:0000393!2.78e-12!39;CL:0000211!2.78e-12!39;CL:0002321!2.46e-10!70;CL:0000220!2.46e-10!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,2.56e-25,3;CL:0000117,9.76e-22,23;CL:0000337,9.76e-22,23;CL:0000540,5.05e-15,33;CL:0000047,5.05e-15,33;CL:0000031,5.05e-15,33;CL:0000404,5.05e-15,33;CL:0000221,3.28e-14,44;CL:0000133,3.28e-14,44;CL:0000393,1.22e-12,39;CL:0000211,1.22e-12,39;CL:0002319,2.05e-11,43;CL:0002321,8.44e-11,70;CL:0000710,9.82e-10,1;CL:0002077,9.82e-10,1;CL:0005014,9.82e-10,1;CL:0002315,9.82e-10,1;CL:0002490,9.82e-10,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001948!7.90e-08!5;UBERON:0002315!7.90e-08!5;UBERON:0004121!2.06e-07!102;UBERON:0000924!2.06e-07!102;UBERON:0006601!2.06e-07!102;UBERON:0002020!3.68e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,3.30e-26,5;UBERON:0002315,3.30e-26,5;UBERON:0002257,2.56e-25,3;UBERON:0002240,6.43e-22,6;UBERON:0005174,6.43e-22,6;UBERON:0001137,6.43e-22,6;UBERON:0002020,2.88e-11,34;UBERON:0003076,3.83e-11,12;UBERON:0003057,3.83e-11,12;UBERON:0001049,3.19e-07,52;UBERON:0005068,3.19e-07,52;UBERON:0006241,3.19e-07,52;UBERON:0007135,3.19e-07,52;UBERON:0000073,6.15e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0.22940928106717,0,0,0,0.380046838912748,0.756090389279792,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0,0,0,0,0,0,0,0,0.809265843438391,1.05798195854407,0,0,0,0,0,0,0,0.384218305321555,1.34796496001021,0.675029691658453,0.630974884054146,1.14260393761521,0.220868540951614,0.857435594504678,0,0,0,0.127687338085188,0.46081959976873,0.791317726381163,0.274462930807229,1.56274011167028,0.279182999001381,0,1.37518422999129,2.35702868378934,2.27794689278565,2.42319279572891,0.984440513331393,0.226714680320357,0,0,1.3599426674155,0,0,0,0,0,0,0,2.95771181531029,0,0,0,0.216491041011214,0,0.505524445014783,0.11418387971906,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0.508280908292259,0,0,0.251308704225729,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0.432276099749388,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0.296452627087149,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0,0,0,1.14754461763673,0,0,0,0,0,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0.180938774784468,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0.276399947608848,0.954670618015114,0,0,0,0.418176592028937,0,0.269728692769641,0,0,0,0,0.56369293868419,0.149516546043979,0.165458490457098,0.194451188344048,0.258319646955462,0,0,0,0,0.241584120826006,0,0,0,0,0.129920822977795,0,0,0,0,0,0.15241361331,0,0,0.0962118416403295,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0.22940928106717,0,0,0,0.380046838912748,0.756090389279792,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0,0,0,0,0,0,0,0,0.809265843438391,1.05798195854407,0,0,0,0,0,0,0,0.384218305321555,1.34796496001021,0.675029691658453,0.630974884054146,1.14260393761521,0.220868540951614,0.857435594504678,0,0,0,0.127687338085188,0.46081959976873,0.791317726381163,0.274462930807229,1.56274011167028,0.279182999001381,0,1.37518422999129,2.35702868378934,2.27794689278565,2.42319279572891,0.984440513331393,0.226714680320357,0,0,1.3599426674155,0,0,0,0,0,0,0,2.95771181531029,0,0,0,0.216491041011214,0,0.505524445014783,0.11418387971906,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0.508280908292259,0,0,0.251308704225729,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0.432276099749388,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0.296452627087149,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0,0,0,1.14754461763673,0,0,0,0,0,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0.180938774784468,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0.276399947608848,0.954670618015114,0,0,0,0.418176592028937,0,0.269728692769641,0,0,0,0,0.56369293868419,0.149516546043979,0.165458490457098,0.194451188344048,0.258319646955462,0,0,0,0,0.241584120826006,0,0,0,0,0.129920822977795,0,0,0,0,0,0.15241361331,0,0,0.0962118416403295,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:97419784..97419792,- | |||
}} | }} |
Latest revision as of 20:32, 3 August 2015
Short description: | p@chr13:97419784..97419792, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:97419784..97419792, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 2.56e-25 | 3 |
CNS neuron (sensu Vertebrata) | 9.76e-22 | 23 |
neuroblast (sensu Vertebrata) | 9.76e-22 | 23 |
neuron | 5.05e-15 | 33 |
neuronal stem cell | 5.05e-15 | 33 |
neuroblast | 5.05e-15 | 33 |
electrically signaling cell | 5.05e-15 | 33 |
ectodermal cell | 3.28e-14 | 44 |
neurectodermal cell | 3.28e-14 | 44 |
electrically responsive cell | 1.22e-12 | 39 |
electrically active cell | 1.22e-12 | 39 |
neural cell | 2.05e-11 | 43 |
embryonic cell | 8.44e-11 | 70 |
neurecto-epithelial cell | 9.82e-10 | 1 |
ecto-epithelial cell | 9.82e-10 | 1 |
auditory epithelial support cell | 9.82e-10 | 1 |
supporting cell of cochlea | 9.82e-10 | 1 |
organ of Corti supporting cell | 9.82e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 3.30e-26 | 5 |
gray matter of spinal cord | 3.30e-26 | 5 |
ventral horn of spinal cord | 2.56e-25 | 3 |
spinal cord | 6.43e-22 | 6 |
dorsal region element | 6.43e-22 | 6 |
dorsum | 6.43e-22 | 6 |
gray matter | 2.88e-11 | 34 |
posterior neural tube | 3.83e-11 | 12 |
chordal neural plate | 3.83e-11 | 12 |
neural tube | 3.19e-07 | 52 |
neural rod | 3.19e-07 | 52 |
future spinal cord | 3.19e-07 | 52 |
neural keel | 3.19e-07 | 52 |
regional part of nervous system | 6.15e-07 | 54 |