FFCP PHASE1:Mm9::chr1:88996275..88996296,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr1:88996275..88996296,+ to FFCP PHASE1:Mm9::chr1:88996275..88996296,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=74 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:88996275..88996296,+ | |||
|description=CAGE_peak_at_chr1:88996275..88996296,+ | |||
|id=chr1:88996275..88996296,+ | |||
|ontology_enrichment_celltype=CL:0000239!5.06e-11!6;CL:0000677!5.06e-11!6;CL:0000212!5.06e-11!6;CL:0000584!5.06e-11!6;CL:0000075!2.47e-09!7;CL:0002563!4.39e-07!9;CL:0002251!4.39e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.54e-09,6;CL:0000677,1.54e-09,6;CL:0000584,1.54e-09,6;CL:0000075,3.39e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.82e-26!43;UBERON:0005409!1.02e-23!59;UBERON:0000344!8.67e-17!15;UBERON:0001242!2.94e-13!13;UBERON:0000060!2.94e-13!13;UBERON:0001262!2.94e-13!13;UBERON:0004786!2.94e-13!13;UBERON:0004923!2.09e-09!24;UBERON:0001007!1.90e-08!128;UBERON:0001555!1.90e-08!128;UBERON:0007026!1.90e-08!128;UBERON:0004119!3.39e-08!130;UBERON:0000925!3.39e-08!130;UBERON:0006595!3.39e-08!130;UBERON:0003350!4.39e-07!9;UBERON:0004808!4.39e-07!9;UBERON:0001277!4.39e-07!9;UBERON:0004921!4.82e-07!126;UBERON:0004185!4.82e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.60e-41,31;UBERON:0005409,1.02e-28,47;UBERON:0000344,9.92e-15,15;UBERON:0001007,3.49e-12,116;UBERON:0001555,3.49e-12,116;UBERON:0007026,3.49e-12,116;UBERON:0004119,6.51e-12,118;UBERON:0000925,6.51e-12,118;UBERON:0006595,6.51e-12,118;UBERON:0004921,9.46e-10,114;UBERON:0001242,1.31e-09,13;UBERON:0001262,1.31e-09,13;UBERON:0004786,1.31e-09,13;UBERON:0004923,8.61e-09,24;UBERON:0001962,8.91e-09,2;UBERON:0001961,8.91e-09,2;UBERON:0001744,8.91e-09,2 | |||
|phase1_expression=0,1.39590163055744,1.81999695755814,1.51232105653415,2.50447864973174,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47978783821539,6.65286915094793,0,0.86152399231815,1.72376986148711,3.04037471130198,0.504060259519861,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.0943402046714,3.96675849995316,0,0,0.257734922644187,0.605050573870028,1.55664630691409,3.04361001780095,13.2868137232463,9.88193728344065,10.8074139784116,4.17808591286417,5.06906626509712,2.69645822596266,6.26800344636613,6.96994456390285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12109756922687,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0,0.218362563746178,0,0.165306911450672,0,1.03691978633434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0,0.476872379894642,0,0,0.25384382367503,0,0,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0,0.429742108096597,0,0,0 | |phase1_expression=0,1.39590163055744,1.81999695755814,1.51232105653415,2.50447864973174,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47978783821539,6.65286915094793,0,0.86152399231815,1.72376986148711,3.04037471130198,0.504060259519861,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.0943402046714,3.96675849995316,0,0,0.257734922644187,0.605050573870028,1.55664630691409,3.04361001780095,13.2868137232463,9.88193728344065,10.8074139784116,4.17808591286417,5.06906626509712,2.69645822596266,6.26800344636613,6.96994456390285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12109756922687,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0,0.218362563746178,0,0.165306911450672,0,1.03691978633434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0,0.476872379894642,0,0,0.25384382367503,0,0,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0,0.429742108096597,0,0,0 | ||
|short_description=p@chr1:88996275..88996296,+ | |||
}} | }} |
Latest revision as of 03:31, 6 August 2015
Short description: | p@chr1:88996275..88996296, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:88996275..88996296, + |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.54e-09 | 6 |
gut absorptive cell | 1.54e-09 | 6 |
enterocyte | 1.54e-09 | 6 |
columnar/cuboidal epithelial cell | 3.39e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.60e-41 | 31 |
gastrointestinal system | 1.02e-28 | 47 |
mucosa | 9.92e-15 | 15 |
digestive system | 3.49e-12 | 116 |
digestive tract | 3.49e-12 | 116 |
primitive gut | 3.49e-12 | 116 |
endoderm-derived structure | 6.51e-12 | 118 |
endoderm | 6.51e-12 | 118 |
presumptive endoderm | 6.51e-12 | 118 |
subdivision of digestive tract | 9.46e-10 | 114 |
intestinal mucosa | 1.31e-09 | 13 |
wall of intestine | 1.31e-09 | 13 |
gastrointestinal system mucosa | 1.31e-09 | 13 |
organ component layer | 8.61e-09 | 24 |
gut-associated lymphoid tissue | 8.91e-09 | 2 |
mucosa-associated lymphoid tissue | 8.91e-09 | 2 |
lymphoid tissue | 8.91e-09 | 2 |