FFCP PHASE1:Mm9::chr2:104582959..104582977,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:104582959..104582977,- to FFCP PHASE1:Mm9::chr2:104582959..104582977,-: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=211896 | |EntrezGene=211896 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=207 | |||
|TSSclassifier=NA | |||
|UniProt=Q91WS7 | |UniProt=Q91WS7 | ||
|association_with_transcript=-1bp_to_NM_144804,uc008lke.1_5end | |||
|cluster_id=chr2:104582959..104582977,- | |||
|description=CAGE_peak_1_at_Depdc7_5end | |||
|id=chr2:104582959..104582977,- | |||
|ontology_enrichment_celltype=CL:0000066!1.63e-09!25;CL:0000223!8.06e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.44e-10,25;CL:0000223,4.27e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.68e-10!22;UBERON:0007499!1.68e-10!22;UBERON:0006925!1.68e-10!22;UBERON:0009497!1.68e-10!22;UBERON:0000015!1.68e-10!22;UBERON:0002423!1.68e-10!22;UBERON:0006235!1.68e-10!22;UBERON:0008835!1.68e-10!22;UBERON:0003894!1.68e-10!22;UBERON:0004161!1.68e-10!22;UBERON:0008836!1.68e-10!22;UBERON:0000160!2.85e-10!43;UBERON:0009854!3.29e-09!23;UBERON:0009856!3.29e-09!23;UBERON:0002365!4.43e-09!25;UBERON:0002330!4.43e-09!25;UBERON:0000344!5.68e-09!15;UBERON:0001242!5.24e-08!13;UBERON:0000060!5.24e-08!13;UBERON:0001262!5.24e-08!13;UBERON:0004786!5.24e-08!13;UBERON:0005172!5.26e-08!49;UBERON:0005173!5.26e-08!49;UBERON:0002417!5.26e-08!49;UBERON:0000916!5.26e-08!49;UBERON:0005409!1.61e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.43e-13,31;UBERON:0002107,1.16e-10,22;UBERON:0007499,1.16e-10,22;UBERON:0006925,1.16e-10,22;UBERON:0009497,1.16e-10,22;UBERON:0000015,1.16e-10,22;UBERON:0002423,1.16e-10,22;UBERON:0006235,1.16e-10,22;UBERON:0008835,1.16e-10,22;UBERON:0003894,1.16e-10,22;UBERON:0004161,1.16e-10,22;UBERON:0008836,1.16e-10,22;UBERON:0009854,1.51e-09,23;UBERON:0009856,1.51e-09,23;UBERON:0002365,3.25e-09,25;UBERON:0002330,3.25e-09,25;UBERON:0000344,4.19e-09,15;UBERON:0005409,3.79e-08,47;UBERON:0001242,4.02e-08,13;UBERON:0001262,4.02e-08,13;UBERON:0004786,4.02e-08,13;UBERON:0005172,1.27e-07,49;UBERON:0005173,1.27e-07,49;UBERON:0002417,1.27e-07,49;UBERON:0000916,1.27e-07,49;UBERON:0003104,1.87e-07,61;UBERON:0009142,1.87e-07,61 | |||
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|phase1_expression=22.1005409004616,133.308605718236,139.229767253198,145.787749849892,156.27946774326,19.3061162698673,14.2503710763271,0,0.140788722151667,3.5109678948299,0,0.159544317990673,0,0,0.666219523631325,0,0.699561878128147,0,0.411343300817216,0,4.84746753861098,0.198581902401771,0,27.9986739888462,36.2466664086129,100.490593720129,64.1835374277021,50.420268448498,89.6910539834085,67.0400145161416,40.5766834499208,1.90509202037889,2.46025915033828,0,8.95440021228951,6.4831511689812,8.77928231928187,0.418531630736908,0.7813353445238,1.0470474879476,0.588231488031014,0,0,2.89562681343828,2.53442328048786,1.46837401729345,2.34717403304412,2.18025156380447,3.73466510648602,5.63846707315422,2.2397827460058,1.43752564364972,0,0,0,4.63066984864705,7.44986943840768,3.6097046459421,0.202316460859598,0,0,1.69422266034566,0.889294796111139,1.7997994345628,2.96659908770092,2.8419204597844,1.19840044207362,0.384218305321555,1.14058573539325,1.08004750665353,1.89292465216244,2.85650984403804,7.95126747425809,4.16468717330844,3.25874601462004,3.67687514644008,6.60695285996332,3.06449611404451,4.76180253094355,0.659431438650969,0.182975287204819,1.04182674111352,3.90856198601933,3.93933827022176,3.36156145108982,3.53554302568401,4.55589378557129,0.745597783301202,3.55913108665965,5.59229544790213,2.31891590961342,33.5565312022741,62.557362701113,75.0187436376566,80.572275763511,58.2434953226536,16.431997155415,1.02258193546835,0.519572009205738,0.70667914902068,46.9008587856346,2.56652954828636,2.54805239706646,0,9.95858788651585,8.36087556067825,6.57181778519218,23.8644308612835,1.55362730188303,0.445326417194474,2.4287945747259,2.43572382649713,1.84492397804847,1.05505848386836,0.940709657085638,2.51333182659351,47.9558237404685,0.722996784599558,0.884610551949874,2.26473589926373,0.883366073841574,0.484875253135222,0,0.878342391034642,1.04723353406728,28.8666472385708,0.838705871541442,1.19980546198682,1.77898317902291,1.9472783122627,1.83000241127451,0.502617408451458,1.56441888173049,0.767146371990992,3.32460871295296,0.486723789203273,3.05518091550949,12.3162900903992,53.0717792710717,1.05220927943237,0.390361328888111,0.229902104433473,0.720248519221397,1.50704817835715,0.612328492361951,0.640568601424249,0.937017245597288,1.29351685369508,0.862271971731369,0.567318240503458,0.703804496655795,2.19195732427575,1.11218899690239,2.78601733217733,2.26360350048738,1.99034266818493,0.702213187313235,1.54408744268829,1.13665399758237,1.24275463521301,0.469052119962192,1.62055855314913,0.23674473558521,1.77087808572663,2.46827380619805,1.16266972375204,1.60964040839772,0.817357396570186,2.13927804887525,1.31333971263276,1.13496333364198,1.02339991197733,1.09775057645525,0.402619256281115,2.73376933133365,0.514523061896422,63.4404063328892,24.8583532663732,0.853153002140936,4.18026009348789,7.7320476793256,20.7734030362043,23.7944506914011,29.8654232996718,26.5736274464927,41.8335344998988,38.202951737641,42.9745979608886,45.426632298755,35.0539569375146,28.7463606333343,30.4686148079182,6.06937283049861,4.79843752960861,4.50830942692322,8.96065842519383,10.4734343070518,12.8348550399283,17.0106284864252,26.8650469322876,27.631776100082,25.6666100957345,55.1401886382097,5.17219827719892,5.11053387294328,6.97072548393047,11.3601667977562,13.9882752656402,13.2405442926338,13.5217184601881,6.97181475132652,30.476316863877,34.5043695665651,40.1912223481984,61.783459276683,73.2478746046624,58.3041593946215,37.6305946663426,0.369506380333209,2.84237117655727,1.30371981153621,2.20668611507745,2.11221223459652,2.01007508930179,1.90434912708811,1.75620283072019,1.41871629695572,1.32878813789265,0.637819074629948,1.80249646187312,2.07221978239075,1.15719246865209,6.03165135757089,7.61467957346193,2.95058563811422,1.37968373152366,4.0137647496948,2.46144541843627,7.54100748732707,2.27223834483936,33.128363038707,29.6733445665445,36.1911308191102,11.4705023017225,9.13474563737816,9.34152551603147,20.6453457854196,16.9508397588561,16.9973744517005,0.321321316421807,3.83238230062325,1.24645922567079,1.95464351224291,1.48473110675282,1.32745138339963,1.69946445308487,1.51161778482376,2.26326095707078,0.885905678642318,0.307435147943927,9.30341855405596,10.1789444253702,7.12994756769443,4.42451461110142,7.37930260024991,1.03135543248187,6.46835250932197,1.44048875225048,0.258717367565509,0.428674070063185,0.886701168211368,2.31879462882692,1.15184314421485,1.8267896946876,5.39744928546534,3.1774810629573,0.220528398054962,1.97863503529776,2.26050197374268,2.23157822234177,2.26807453605959,3.28281799490123,41.9732404746985,6.11903496634682,0.854354403989263,2.06386867963222,2.03713980106683,0.941842285023455,0.956859594047176,0.228778173206523,0.339956859987711,0.279902904647316,0.276399947608848,0.954670618015114,3.00519193902079,3.25311147402958,3.88819226958485,2.50905955217362,6.11415178489297,3.77620169877498,6.52962300230154,2.35580347785627,1.03691978633434,1.24267862617385,0,1.34564891439581,2.48187735685646,1.944511883440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| ||
|short_description=p1@Depdc7 | |||
}} | }} |
Latest revision as of 22:10, 1 October 2015
Short description: | p1@Depdc7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Depdc7_5end |
Coexpression cluster: | MCL_coexpression_mm9:207 |
Association with transcript: | -1bp_to_NM_144804, uc008lke.1_5end |
EntrezGene: | Depdc7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.44e-10 | 25 |
endodermal cell | 4.27e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.43e-13 | 31 |
liver | 1.16e-10 | 22 |
epithelial sac | 1.16e-10 | 22 |
digestive gland | 1.16e-10 | 22 |
epithelium of foregut-midgut junction | 1.16e-10 | 22 |
anatomical boundary | 1.16e-10 | 22 |
hepatobiliary system | 1.16e-10 | 22 |
foregut-midgut junction | 1.16e-10 | 22 |
hepatic diverticulum | 1.16e-10 | 22 |
liver primordium | 1.16e-10 | 22 |
septum transversum | 1.16e-10 | 22 |
liver bud | 1.16e-10 | 22 |
digestive tract diverticulum | 1.51e-09 | 23 |
sac | 1.51e-09 | 23 |
exocrine gland | 3.25e-09 | 25 |
exocrine system | 3.25e-09 | 25 |
mucosa | 4.19e-09 | 15 |
gastrointestinal system | 3.79e-08 | 47 |
intestinal mucosa | 4.02e-08 | 13 |
wall of intestine | 4.02e-08 | 13 |
gastrointestinal system mucosa | 4.02e-08 | 13 |
abdomen element | 1.27e-07 | 49 |
abdominal segment element | 1.27e-07 | 49 |
abdominal segment of trunk | 1.27e-07 | 49 |
abdomen | 1.27e-07 | 49 |
mesenchyme | 1.87e-07 | 61 |
entire embryonic mesenchyme | 1.87e-07 | 61 |