FFCP PHASE1:Mm9::chr2:32241018..32241031,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:32241018..32241031,- to FFCP PHASE1:Mm9::chr2:32241018..32241031,-: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=16819 | |EntrezGene=16819 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1776 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=487bp_to_ENSMUST00000144569_5end | |||
|cluster_id=chr2:32241018..32241031,- | |||
|description=CAGE_peak_3_at_Lcn2_5end | |||
|id=chr2:32241018..32241031,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.25e-11,3;DOID:4045,4.25e-11,3 | |||
|ontology_enrichment_uberon=UBERON:0009569!3.01e-13!66;UBERON:0005172!1.34e-12!49;UBERON:0005173!1.34e-12!49;UBERON:0002417!1.34e-12!49;UBERON:0000916!1.34e-12!49;UBERON:0005256!1.79e-12!47;UBERON:0002100!5.72e-12!98;UBERON:0003887!2.35e-10!10;UBERON:0000466!1.22e-09!79;UBERON:0000926!4.00e-09!193;UBERON:0004120!4.00e-09!193;UBERON:0006603!4.00e-09!193;UBERON:0002365!7.20e-09!25;UBERON:0002330!7.20e-09!25;UBERON:0005177!1.64e-08!85;UBERON:0003104!5.49e-08!131;UBERON:0009142!5.49e-08!131;UBERON:0004175!8.37e-08!9;UBERON:0002107!1.10e-07!22;UBERON:0007499!1.10e-07!22;UBERON:0006925!1.10e-07!22;UBERON:0009497!1.10e-07!22;UBERON:0000015!1.10e-07!22;UBERON:0002423!1.10e-07!22;UBERON:0006235!1.10e-07!22;UBERON:0008835!1.10e-07!22;UBERON:0003894!1.10e-07!22;UBERON:0004161!1.10e-07!22;UBERON:0008836!1.10e-07!22;UBERON:0003100!1.43e-07!11;UBERON:0009854!3.58e-07!23;UBERON:0009856!3.58e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003100,5.76e-10,11;UBERON:0005256,2.61e-09,45;UBERON:0004175,9.47e-09,9;UBERON:0003104,2.10e-07,61;UBERON:0009142,2.10e-07,61;UBERON:0001911,2.25e-07,2;UBERON:0000076,2.25e-07,2;UBERON:0005333,2.25e-07,2;UBERON:0008425,2.25e-07,2;UBERON:0005311,2.25e-07,2;UBERON:0002365,9.65e-07,25;UBERON:0002330,9.65e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,41.4346314429539,14.0640362014284,41.3583757739301,25.8821854733646,22.5405010036287,26.2175590636823,0.377690453926732,0.405507724878058,0,0,0,0.878744730937887,1.74986909166855,0,0,0,0,0,0,0,2.06268836910977,0,0,0,0,0,0.449949858640699,0,0,0.599200221036809,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,12.2394840067395,0,0,0.448026887097336,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.94112595522402,0,0,0,0,0.461230994512117,0,0.23517741427141,0,0.988779870937496,0,23.8844849026466,0.161766849947409,0.883366073841574,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611036183101898,7.34001126599549,12.1306924048164,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0,0,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0.405720242777006,0.964708639009667,0.763877555344259,2.01387296215567,13.619359049103,1.09824565275233,2.87536413054709,2.60498663367952,0,0,0.179397413521912,0.482443521363367,0.923765950833023,0,0,0,0,0,0,0.390267295715598,0.315270288212382,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0.433947175744535,0,1.08781136763742,11.8023425524569,7.45029215022778,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0.325773918707152,6.92874516484649,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0.220528398054962,0,0,0,0,0,0,0,5.12612642393558,2.47664241555867,0.555583582109135,0.565105371014073,0.683471138605126,0.457556346413045,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0.13020438484395,0,0,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,4.87974436173073,27.8390468886243,4.93047271881851,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0.382576664137687,0.220591419119515,0.927471342481686 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,41.4346314429539,14.0640362014284,41.3583757739301,25.8821854733646,22.5405010036287,26.2175590636823,0.377690453926732,0.405507724878058,0,0,0,0.878744730937887,1.74986909166855,0,0,0,0,0,0,0,2.06268836910977,0,0,0,0,0,0.449949858640699,0,0,0.599200221036809,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,12.2394840067395,0,0,0.448026887097336,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.94112595522402,0,0,0,0,0.461230994512117,0,0.23517741427141,0,0.988779870937496,0,23.8844849026466,0.161766849947409,0.883366073841574,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611036183101898,7.34001126599549,12.1306924048164,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0,0,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0.405720242777006,0.964708639009667,0.763877555344259,2.01387296215567,13.619359049103,1.09824565275233,2.87536413054709,2.60498663367952,0,0,0.179397413521912,0.482443521363367,0.923765950833023,0,0,0,0,0,0,0.390267295715598,0.315270288212382,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0.433947175744535,0,1.08781136763742,11.8023425524569,7.45029215022778,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0.325773918707152,6.92874516484649,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0.220528398054962,0,0,0,0,0,0,0,5.12612642393558,2.47664241555867,0.555583582109135,0.565105371014073,0.683471138605126,0.457556346413045,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0.13020438484395,0,0,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,4.87974436173073,27.8390468886243,4.93047271881851,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0.382576664137687,0.220591419119515,0.927471342481686 | ||
|short_description=p3@Lcn2 | |||
}} | }} |
Latest revision as of 14:18, 26 September 2015
Short description: | p3@Lcn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Lcn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1776 |
Association with transcript: | 487bp_to_ENSMUST00000144569_5end |
EntrezGene: | Lcn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
female organism | 5.76e-10 | 11 |
trunk mesenchyme | 2.61e-09 | 45 |
internal genitalia | 9.47e-09 | 9 |
mesenchyme | 2.10e-07 | 61 |
entire embryonic mesenchyme | 2.10e-07 | 61 |
mammary gland | 2.25e-07 | 2 |
external ectoderm | 2.25e-07 | 2 |
mammary bud | 2.25e-07 | 2 |
mammary ridge | 2.25e-07 | 2 |
mammary placode | 2.25e-07 | 2 |
exocrine gland | 9.65e-07 | 25 |
exocrine system | 9.65e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.25e-11 | 3 |
muscle cancer | 4.25e-11 | 3 |