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FFCP PHASE1:Mm9::chr3:146162792..146162807,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:146162792..146162807,+
|DHSsupport=NA
|short_description=p2@Gm13342,p2@Gm15776,p2@Gm4356,p2@Gng5,p2@LOC100048410
|DPIdataset=NA
|description=CAGE_peak_2_at_Gm13342_5end,CAGE_peak_2_at_Gm15776_5end,CAGE_peak_2_at_Gm4356_5end,CAGE_peak_2_at_Gng5_5end,CAGE_peak_2_at_LOC100048410_5end
|association_with_transcript=0bp_to_ENSMUST00000090031,NM_010318,uc008rrk.1_5end
|EntrezGene=100041703,100043318,100043507,100048410,14707
|EntrezGene=100041703,100043318,100043507,100048410,14707
|HGNC=
|HGNC=
|MCL_coexpression_id=380
|TSSclassifier=NA
|UniProt=Q80SZ7,Q3UKC8
|UniProt=Q80SZ7,Q3UKC8
|association_with_transcript=0bp_to_ENSMUST00000090031,NM_010318,uc008rrk.1_5end
|cluster_id=chr3:146162792..146162807,+
|description=CAGE_peak_2_at_Gm13342_5end,CAGE_peak_2_at_Gm15776_5end,CAGE_peak_2_at_Gm4356_5end,CAGE_peak_2_at_Gng5_5end,CAGE_peak_2_at_LOC100048410_5end
|id=chr3:146162792..146162807,+
|ontology_enrichment_celltype=CL:0000066!5.18e-07!25
|ontology_enrichment_celltype_v019_2=CL:0000066,5.18e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!5.16e-11!59;UBERON:0000160!6.30e-11!43;UBERON:0000344!2.51e-09!15;UBERON:0001242!2.89e-08!13;UBERON:0000060!2.89e-08!13;UBERON:0001262!2.89e-08!13;UBERON:0004786!2.89e-08!13;UBERON:0001007!4.37e-07!128;UBERON:0001555!4.37e-07!128;UBERON:0007026!4.37e-07!128;UBERON:0004119!7.92e-07!130;UBERON:0000925!7.92e-07!130;UBERON:0006595!7.92e-07!130
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.30e-10,31;UBERON:0005409,3.27e-10,47;UBERON:0000344,2.51e-09,15;UBERON:0001242,2.89e-08,13;UBERON:0001262,2.89e-08,13;UBERON:0004786,2.89e-08,13
|phase1_expression=14.4133962394315,50.6014341077074,47.3199208965117,26.616850595001,27.5492651470491,36.4298020048801,32.004931761587,6.19791952519566,2.25261955442667,1.40438715793196,2.05461561870606,2.31339261086476,4.96482116800497,4.98296293788285,12.9912807108108,22.4747546802707,22.3859801001007,7.5710919685977,7.40417941470989,14.429248161133,17.2637879006672,11.1205865344992,6.52999472847338,38.3981814704176,43.3583541216951,74.6501553349526,59.0143934737932,48.0500848889533,58.3371897731068,56.7067791959844,55.6543581744815,11.4305521222734,5.53558308826113,0,35.5287492294068,46.7119353457364,37.1588228397512,42.6902263351646,41.4107732597614,43.4524707498253,61.1760747552255,62.1571391312186,50.49307671524,12.211991343631,13.787262645854,9.36088436024576,43.8139152834902,16.7879370412944,43.2781779986909,15.3599620268684,9.65906309215001,41.6882436658418,9.39582593923324,3.62681071005672,3.02484419228218,27.2695002198104,28.0802771139982,39.1910790130856,12.3413041124355,14.2827564403449,10.775133859605,23.041428180701,24.9002542911119,79.1911751207631,62.2985808417194,91.6519348280469,42.2436155830951,56.8643091875901,18.0419925416751,21.8709620097339,17.2466468308133,12.5686433137674,9.93908434282261,14.6988959057945,9.29701068876893,8.27296907949019,5.50579404996943,4.97980618532232,6.29786786350598,11.0784481693363,5.39777097254217,10.939180781692,8.09630697104005,10.6924895906019,9.47349136216223,9.1334861496837,6.97621235915604,8.94717339961443,29.230310626609,25.8454735565206,12.1743085254705,21.5105969245347,15.6393406752783,18.3499085156858,18.8435161059824,11.2006721774334,35.9537715537285,24.3715361286623,33.5123945937701,29.3271846843582,15.4927761754349,17.9657068380045,17.8363667794652,14.2213340630666,39.6178605050522,34.2035818391383,30.331466700887,26.1481084556647,7.50919862576798,15.1410981846121,14.052311468057,9.74289530598852,14.9900073216438,15.0722640552623,11.0533384707563,20.7349875693965,14.8316980640624,15.0383331196708,15.0383793831479,18.6031877439521,21.6424688091186,18.4252596191384,16.775258509631,2.92780797011547,2.72280718857492,27.3339049073193,13.7787393181808,7.7987355029143,12.9611631614526,4.6435098215495,4.57500602818627,9.67538511269056,3.30266208365325,1.53429274398198,5.61027720310812,4.54275536589721,9.67473956578005,16.6705340617525,30.326731012041,13.4682787767343,10.539755879979,15.6333431014762,13.6847218652065,12.2070902446929,9.25296388458059,9.99287018221828,11.5253121208466,6.72628763921441,6.89817577385095,10.2117283290622,9.32540958068929,14.0285268753648,7.22922847986555,12.537077994798,10.906453229621,14.52950147775,4.21327912387941,4.88961023517959,9.66155897945015,16.7771875753757,16.8858763186389,19.4467026377896,13.7311946639422,18.2990735525086,20.8260602397961,21.6256568617879,21.1935987105699,17.7483320398098,14.3167069424728,17.0734162642259,18.7268950050927,20.9065982018225,20.1986106067767,21.3388205828991,3.36463917702604,6.5858951922742,46.9194671836993,24.8583532663732,13.0105832826493,8.12828351511535,12.1135413642768,18.9582513145942,25.3510969983152,31.5774539346848,32.2679761850268,31.7868982617341,25.6361912976275,24.0737331169792,28.2697926322724,18.8752075817387,33.2852596807029,33.2565926334793,10.4317345524195,9.48262654660749,7.88954149711563,9.57161240872977,9.69762435838129,7.71494018793504,11.1928670709935,17.8608279055319,15.3858753284547,13.4502908674763,18.3800628794032,21.5230186373761,19.0662225259807,20.6873143394065,25.3575151735629,22.1882986972223,29.7912246584261,22.727994858614,11.6737363278025,25.8087728396797,63.258010872036,14.5134969590716,19.9704110793319,21.9743623813987,20.8100999685418,15.9206362049911,23.2789019609922,15.1593129416388,9.94086356296358,12.7308814331391,9.62230017982859,13.0654880804616,13.0924002487308,17.5620283072019,6.30540576424764,11.9590932410338,14.1914744105164,17.533374674584,23.3124725518959,17.3578870297814,31.6661696272472,38.6173035511284,13.769399644533,11.8652800911035,6.42202359951168,5.04010252346474,13.7705354116407,53.5238365673271,6.94118082715765,8.98009111882268,4.95473814785438,7.16906393857656,9.13474563737816,7.92614286208731,6.8817819284732,6.72188473196017,7.90575555893047,4.17717711348349,11.9229671574946,13.7110514823787,8.63300884573953,11.3829384851049,18.5843193675948,14.3240575331439,16.0231485191318,25.6502908468021,25.3959627877465,19.6758494684114,15.5056975900933,13.0872142611902,19.9638531895444,17.0659849285341,14.7586052004998,19.5957532171555,21.4476951624886,12.0640933000978,15.1349660025823,13.2888961719587,15.0739198595933,15.6964559489822,11.5184314421485,9.13394847343798,15.2536610241412,7.83778662196135,20.0680842230015,17.1481703059139,13.724476269152,14.4751019827574,16.3540111284297,13.1312719796049,23.6099477670179,6.11903496634682,12.815316059839,12.5895989457566,13.3340059706192,17.8950034154456,12.3024804948923,12.3540213531522,11.8984900995699,13.5752908753948,9.53579819250524,42.9601778106801,9.96458379780576,15.4522795016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|phase1_expression=14.4133962394315,50.6014341077074,47.3199208965117,26.616850595001,27.5492651470491,36.4298020048801,32.004931761587,6.19791952519566,2.25261955442667,1.40438715793196,2.05461561870606,2.31339261086476,4.96482116800497,4.98296293788285,12.9912807108108,22.4747546802707,22.3859801001007,7.5710919685977,7.40417941470989,14.429248161133,17.2637879006672,11.1205865344992,6.52999472847338,38.3981814704176,43.3583541216951,74.6501553349526,59.0143934737932,48.0500848889533,58.3371897731068,56.7067791959844,55.6543581744815,11.4305521222734,5.53558308826113,0,35.5287492294068,46.7119353457364,37.1588228397512,42.6902263351646,41.4107732597614,43.4524707498253,61.1760747552255,62.1571391312186,50.49307671524,12.211991343631,13.787262645854,9.36088436024576,43.8139152834902,16.7879370412944,43.2781779986909,15.3599620268684,9.65906309215001,41.6882436658418,9.39582593923324,3.62681071005672,3.02484419228218,27.2695002198104,28.0802771139982,39.1910790130856,12.3413041124355,14.2827564403449,10.775133859605,23.041428180701,24.9002542911119,79.1911751207631,62.2985808417194,91.6519348280469,42.2436155830951,56.8643091875901,18.0419925416751,21.8709620097339,17.2466468308133,12.5686433137674,9.93908434282261,14.6988959057945,9.29701068876893,8.27296907949019,5.50579404996943,4.97980618532232,6.29786786350598,11.0784481693363,5.39777097254217,10.939180781692,8.09630697104005,10.6924895906019,9.47349136216223,9.1334861496837,6.97621235915604,8.94717339961443,29.230310626609,25.8454735565206,12.1743085254705,21.5105969245347,15.6393406752783,18.3499085156858,18.8435161059824,11.2006721774334,35.9537715537285,24.3715361286623,33.5123945937701,29.3271846843582,15.4927761754349,17.9657068380045,17.8363667794652,14.2213340630666,39.6178605050522,34.2035818391383,30.331466700887,26.1481084556647,7.50919862576798,15.1410981846121,14.052311468057,9.74289530598852,14.9900073216438,15.0722640552623,11.0533384707563,20.7349875693965,14.8316980640624,15.0383331196708,15.0383793831479,18.6031877439521,21.6424688091186,18.4252596191384,16.775258509631,2.92780797011547,2.72280718857492,27.3339049073193,13.7787393181808,7.7987355029143,12.9611631614526,4.6435098215495,4.57500602818627,9.67538511269056,3.30266208365325,1.53429274398198,5.61027720310812,4.54275536589721,9.67473956578005,16.6705340617525,30.326731012041,13.4682787767343,10.539755879979,15.6333431014762,13.6847218652065,12.2070902446929,9.25296388458059,9.99287018221828,11.5253121208466,6.72628763921441,6.89817577385095,10.2117283290622,9.32540958068929,14.0285268753648,7.22922847986555,12.537077994798,10.906453229621,14.52950147775,4.21327912387941,4.88961023517959,9.66155897945015,16.7771875753757,16.8858763186389,19.4467026377896,13.7311946639422,18.2990735525086,20.8260602397961,21.6256568617879,21.1935987105699,17.7483320398098,14.3167069424728,17.0734162642259,18.7268950050927,20.9065982018225,20.1986106067767,21.3388205828991,3.36463917702604,6.5858951922742,46.9194671836993,24.8583532663732,13.0105832826493,8.12828351511535,12.1135413642768,18.9582513145942,25.3510969983152,31.5774539346848,32.2679761850268,31.7868982617341,25.6361912976275,24.0737331169792,28.2697926322724,18.8752075817387,33.2852596807029,33.2565926334793,10.4317345524195,9.48262654660749,7.88954149711563,9.57161240872977,9.69762435838129,7.71494018793504,11.1928670709935,17.8608279055319,15.3858753284547,13.4502908674763,18.3800628794032,21.5230186373761,19.0662225259807,20.6873143394065,25.3575151735629,22.1882986972223,29.7912246584261,22.727994858614,11.6737363278025,25.8087728396797,63.258010872036,14.5134969590716,19.9704110793319,21.9743623813987,20.8100999685418,15.9206362049911,23.2789019609922,15.1593129416388,9.94086356296358,12.7308814331391,9.62230017982859,13.0654880804616,13.0924002487308,17.5620283072019,6.30540576424764,11.9590932410338,14.1914744105164,17.533374674584,23.3124725518959,17.3578870297814,31.6661696272472,38.6173035511284,13.769399644533,11.8652800911035,6.42202359951168,5.04010252346474,13.7705354116407,53.5238365673271,6.94118082715765,8.98009111882268,4.95473814785438,7.16906393857656,9.13474563737816,7.92614286208731,6.8817819284732,6.72188473196017,7.90575555893047,4.17717711348349,11.9229671574946,13.7110514823787,8.63300884573953,11.3829384851049,18.5843193675948,14.3240575331439,16.0231485191318,25.6502908468021,25.3959627877465,19.6758494684114,15.5056975900933,13.0872142611902,19.9638531895444,17.0659849285341,14.7586052004998,19.5957532171555,21.4476951624886,12.0640933000978,15.1349660025823,13.2888961719587,15.0739198595933,15.6964559489822,11.5184314421485,9.13394847343798,15.2536610241412,7.83778662196135,20.0680842230015,17.1481703059139,13.724476269152,14.4751019827574,16.3540111284297,13.1312719796049,23.6099477670179,6.11903496634682,12.815316059839,12.5895989457566,13.3340059706192,17.8950034154456,12.3024804948923,12.3540213531522,11.8984900995699,13.5752908753948,9.53579819250524,42.9601778106801,9.96458379780576,15.4522795016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|short_description=p2@Gm13342,p2@Gm15776,p2@Gm4356,p2@Gng5,p2@LOC100048410
}}
}}

Latest revision as of 18:44, 1 October 2015

Short description:p2@Gm13342, p2@Gm15776, p2@Gm4356, p2@Gng5, p2@LOC100048410
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Gm13342_5end, CAGE_peak_2_at_Gm15776_5end, CAGE_peak_2_at_Gm4356_5end, CAGE_peak_2_at_Gng5_5end, CAGE_peak_2_at_LOC100048410_5end
Coexpression cluster:MCL_coexpression_mm9:380
Association with transcript: 0bp_to_ENSMUST00000090031, NM_010318, uc008rrk.1_5end
EntrezGene:100041703,100043318,100043507,100048410,14707
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Gm13342p2@Gm15776p2@Gm4356p2@Gng5p2@LOC100048410

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G714.41
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I550.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I647.32
CD326+ enterocyte, pool1.CNhs13542.11848-124I326.62
CD326+ enterocyte, pool2.CNhs13197.11849-124I427.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I736.43
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I832.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.31
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.96
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.98
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A112.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A322.47
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A522.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A27.57
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A47.40
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A614.43
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A317.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H211.12
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.53
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D138.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D243.36
GP2+ M cell, pool1.CNhs13228.11845-124H974.65
GP2+ M cell, pool2.CNhs13231.11846-124I159.01
GP2+ M cell, pool3.CNhs13240.11847-124I248.05
Ileum epithelium, pool1.CNhs13199.10252-104B958.34
Ileum epithelium, pool2.CNhs13232.10253-104C156.71
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C855.65
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I311.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G65.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F535.53
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F646.71
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F737.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G842.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H141.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H343.45
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G961.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H262.16
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H450.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D812.21
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D913.79
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B39.36
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B743.81
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C216.79
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B843.28
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C315.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C49.66
Mouse Astrocytes, donor3.CNhs12107.11633-122C441.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A29.40
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C127.27
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E128.08
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C539.19
Mouse Granule cells, donor1.CNhs12131.11713-123C312.34
Mouse Granule cells, donor2.CNhs12357.11731-123E314.28
Mouse Granule cells, donor3.CNhs12108.11636-122C710.78
Mouse Meningeal cells, donor1.CNhs12132.11716-123C623.04
Mouse Meningeal cells, donor3.CNhs12109.11639-122D124.90
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C779.19
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E762.30
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D291.65
Mouse Microglia, donor1.CNhs12629.11718-123C842.24
Mouse Microglia, donor2.CNhs12634.11736-123E856.86
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D518.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F521.87
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D917.25
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.94
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D214.70
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.30
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.08
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.40
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.10
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.47
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.13
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.95
Mouse Schwann, donor1.CNhs12507.11728-123D929.23
Mouse Schwann, donor2.CNhs12573.11746-123F925.85
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G312.17
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F721.51
Mouse hepatocyte, donor1.CNhs13078.11714-123C415.64
Mouse hepatocyte, donor3.CNhs12615.11637-122C818.35
Mouse hepatocyte, donor6.CNhs13090.11822-124F418.84
Mouse hepatocyte, donor8.CNhs13091.11824-124F611.20
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A735.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I724.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E333.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I829.33
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G615.49
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H117.97
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G139.62
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G234.20
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G330.33
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B626.15
accessory axillary lymph node, adult.CNhs10475.1063-29H97.51
adrenal gland, adult.CNhs10508.49-24D715.14
adrenal gland, embryo E14.CNhs11038.406-44C514.05
adrenal gland, embryo E16.CNhs11004.1254-43D69.74
adrenal gland, embryo E17.CNhs11043.1263-45I114.99
adrenal gland, embryo E18.CNhs11026.1262-18F515.07
adrenal gland, neonate N00.CNhs11191.1311-23C111.05
adrenal gland, neonate N25.CNhs11223.1377-27I320.73
amnion, adult pregnant day17.5.CNhs10488.583-22A814.83
aorta, adult.CNhs10498.46-23H115.04
bone (os femoris), adult.CNhs10483.56-12G215.04
bone (os femoris), neonate N02.CNhs11227.1985-43F518.60
bone (os femoris), neonate N16.CNhs11225.1525-43A621.64
bone (os femoris), neonate N20.CNhs11195.1350-25C318.43
cecum, adult.CNhs10467.37-13H416.78
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H727.33
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C713.78
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D17.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D412.96
corpora quadrigemina, adult.CNhs10501.16-22A44.64
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F19.68
cortex, adult.CNhs10473.12-14D53.30
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F25.61
diencephalon, neonate N30.CNhs11201.1388-42B24.54
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.67
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A216.67
epididymis, adult.CNhs10490.58-23B230.33
eyeball, adult.CNhs10484.31-12G413.47
eyeball, embryo E12.CNhs11016.345-16C610.54
eyeball, embryo E14.CNhs10521.399-16E215.63
eyeball, embryo E15.CNhs10593.426-16C913.68
eyeball, embryo E17.CNhs11023.1261-18D412.21
eyeball, neonate N00.CNhs11207.633-15C69.25
eyeball, neonate N01.CNhs11140.1532-43E79.99
eyeball, neonate N02.CNhs11205.1551-44G811.53
eyeball, neonate N16.CNhs11188.777-19A26.73
forelimb, embryo E11.CNhs10596.335-25E26.90
forelimb, embryo E12.CNhs10600.359-14H210.21
forelimb, embryo E13.CNhs10589.384-1E29.33
forelimb, embryo E14.CNhs10577.413-26A814.03
forelimb, embryo E15.CNhs11007.437-20E77.23
forelimb, embryo E17.CNhs10598.1517-43C412.54
forelimb, embryo E18.CNhs11008.1520-43B510.91
gonad, embryo E13.CNhs11044.1564-45I614.53
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.21
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.89
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D59.66
heart, embryo E11.CNhs10586.331-24E916.78
heart, embryo E12.CNhs11015.353-12F516.89
heart, embryo E13.CNhs11013.376-3I919.45
heart, embryo E14.CNhs10597.403-26D413.73
heart, embryo E15.CNhs11017.431-16C818.30
heart, embryo E16.CNhs11021.457-17C620.83
heart, embryo E17.CNhs11025.479-18E521.63
heart, embryo E18.CNhs11030.1283-20G321.19
heart, neonate N00.CNhs11213.639-21E317.75
heart, neonate N03.CNhs11221.1349-25I214.32
heart, neonate N10.CNhs11118.749-24G117.07
heart, neonate N16.CNhs11209.782-15G118.73
heart, neonate N20.CNhs11127.821-26I620.91
heart, neonate N25.CNhs11196.1351-25D320.20
heart, neonate N30.CNhs11202.1390-42D221.34
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G16.59
intestinal mucosa, adult.CNhs10506.860-29I346.92
intestine, adult.CNhs10496.178-9A324.86
intestine, embryo E12.CNhs11019.1251-16I513.01
intestine, embryo E13.CNhs11010.381-16D58.13
intestine, embryo E15.CNhs10602.976-16D812.11
intestine, embryo E16.CNhs10585.463-22H418.96
intestine, embryo E17.CNhs10582.482-18D325.35
intestine, embryo E18.CNhs10526.1289-20F731.58
intestine, neonate N00.CNhs11126.644-26D132.27
intestine, neonate N01.CNhs11192.1322-23E931.79
intestine, neonate N06.CNhs11102.688-20B825.64
intestine, neonate N07.CNhs11095.720-20F224.07
intestine, neonate N10.CNhs11098.755-23A528.27
intestine, neonate N20.CNhs11187.827-18D118.88
intestine, neonate N25.CNhs11121.1352-25E333.29
intestine, neonate N30.CNhs11131.1384-42G133.26
kidney, embryo E14.CNhs10606.411-4I910.43
kidney, embryo E15.CNhs10997.434-16F89.48
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I29.57
kidney, embryo E18.CNhs11001.1288-20C79.70
kidney, neonate N00.CNhs11214.646-21G77.71
kidney, neonate N10.CNhs11206.758-6D511.19
kidney, neonate N20.CNhs11113.832-19I117.86
kidney, neonate N25.CNhs11122.1353-25F315.39
kidney, neonate N30.CNhs11203.1385-42H113.45
liver, adult pregnant day01.CNhs10466.508-5B218.38
liver, embryo E12.CNhs10601.355-15F821.52
liver, embryo E13.CNhs10524.378-3H619.07
liver, embryo E14.CNhs10594.409-16E120.69
liver, embryo E15.CNhs10520.433-16D725.36
liver, embryo E16.CNhs10523.462-17F522.19
liver, embryo E17.CNhs10510.481-18A329.79
liver, embryo E18.CNhs10579.499-43G422.73
liver, neonate N00.CNhs11117.641-24F411.67
liver, neonate N03.CNhs11123.1345-25G225.81
liver, neonate N06.CNhs11101.684-20A863.26
liver, neonate N07.CNhs11103.716-20H214.51
liver, neonate N10.CNhs11115.751-24B919.97
liver, neonate N20.CNhs11220.823-25A321.97
liver, neonate N25.CNhs11198.1368-26H120.81
liver, neonate N30.CNhs11106.1382-42D115.92
lung, adult.CNhs10474.28-22B123.28
lung, embryo E12.CNhs10522.354-16G215.16
lung, embryo E14.CNhs10604.404-26F89.94
lung, embryo E15.CNhs11020.432-17C512.73
lung, embryo E16.CNhs10998.458-17B69.62
lung, embryo E17.CNhs10605.480-44A613.07
lung, embryo E18.CNhs10583.1287-20I613.09
lung, neonate N00.CNhs11224.640-42C617.56
lung, neonate N06.CNhs11212.683-20E56.31
lung, neonate N07.CNhs11111.715-19A311.96
lung, neonate N10.CNhs11219.750-23E614.19
lung, neonate N20.CNhs11109.822-18A417.53
lung, neonate N25.CNhs11119.1359-25C723.31
lung, neonate N30.CNhs11133.1394-42H217.36
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A131.67
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A138.62
mammary gland, adult lactating day02.CNhs10480.595-22B613.77
mammary gland, adult pregnant day19.CNhs10476.588-5H211.87
medulla oblongata, adult.CNhs10477.17-12C26.42
medulla oblongata, neonate N30.CNhs11200.1396-42A35.04
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C713.77
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C253.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.94
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.98
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.95
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.17
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.13
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.93
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.88
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.72
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.91
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I711.92
ovary, embryo E18.CNhs11040.505-44H713.71
ovary, neonate N00.CNhs11217.1299-22I48.63
oviduct, adult pregnant day01.CNhs10500.988-6G611.38
pancreas, adult.CNhs10486.34-16E418.58
pancreas, embryo E14.CNhs11012.405-44F414.32
pancreas, embryo E15.CNhs11042.1556-45F216.02
pancreas, embryo E16.CNhs11003.460-26E525.65
pancreas, embryo E17.CNhs10599.1558-45G325.40
pancreas, embryo E18.CNhs10580.1535-43I719.68
pancreas, neonate N00.CNhs11105.645-26G915.51
pancreas, neonate N01.CNhs11138.1531-43D713.09
pancreas, neonate N02.CNhs11139.1539-43D819.96
pancreas, neonate N16.CNhs11136.787-43B617.07
pancreas, neonate N25.CNhs11094.1555-45E214.76
pancreas, neonate N30.CNhs11182.1548-44H519.60
pituitary gland, adult.CNhs10493.21-1G821.45
pituitary gland, embryo E12.CNhs11018.346-16E612.06
pituitary gland, embryo E13.CNhs11009.370-44C715.13
pituitary gland, embryo E14.CNhs11037.398-44A513.29
pituitary gland, embryo E15.CNhs10592.427-16B915.07
pituitary gland, embryo E16.CNhs11036.449-43F615.70
pituitary gland, embryo E17.CNhs11039.1265-44F511.52
pituitary gland, neonate N00.CNhs11190.1308-22E99.13
placenta, adult pregnant day10.CNhs10472.539-13I715.25
placenta, adult pregnant day17.CNhs10464.577-18G37.84
prostate, adult.CNhs10470.859-1F820.07
skin, adult.CNhs10492.30-1C317.15
skin, neonate N00.CNhs11124.650-25G413.72
skin, neonate N03.CNhs11215.662-22H314.48
skin, neonate N06.CNhs11097.693-20I516.35
skin, neonate N10.CNhs11108.762-6C413.13
small intestine, neonate N16.CNhs11114.790-21I123.61
spinal cord, adult.CNhs10505.24-13C96.12
spleen, adult.CNhs10465.25-2G212.82
spleen, embryo E16.CNhs11035.461-43C112.59
spleen, embryo E18.CNhs11011.1271-21F213.33
spleen, neonate N10.CNhs11116.752-24D117.90
spleen, neonate N20.CNhs11112.824-19H112.30
spleen, neonate N25.CNhs11099.1354-25G312.35
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C611.90
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C913.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D39.54
stomach, adult.CNhs10503.33-1H642.96
stomach, embryo E12.CNhs10588.356-43E39.96
stomach, embryo E15.CNhs10603.1252-16G815.45
stomach, embryo E16.CNhs11022.459-17D416.85
stomach, embryo E17.CNhs11006.1035-18D520.49
stomach, embryo E18.CNhs10999.1286-20C620.96
stomach, neonate N03.CNhs11193.1340-24B820.77
stomach, neonate N07.CNhs11210.718-18A917.77
stomach, neonate N25.CNhs11104.1355-25E431.67
stomach, neonate N30.CNhs11134.1386-42I134.87
submandibular gland, adult.CNhs10469.59-29C118.64
testis, adult.CNhs10504.57-7G529.31
testis, embryo E13.CNhs11031.389-23F512.71
testis, embryo E15.CNhs11034.443-27C515.72
testis, embryo E16.CNhs11033.470-26G511.47
testis, embryo E17.CNhs11029.486-18I514.60
testis, embryo E18.CNhs11027.503-18G511.83
testis, neonate N00.CNhs11189.1300-22B710.33
testis, neonate N07.CNhs11222.726-26I414.58
testis, neonate N10.CNhs11204.763-44D913.32
testis, neonate N20.CNhs11110.839-18H317.64
testis, neonate N30.CNhs11130.1391-42E221.89
thymus, adult.CNhs10471.38-12B53.48
thymus, embryo E14.CNhs11041.402-44I47.70
thymus, embryo E15.CNhs11005.430-45I29.35
thymus, embryo E16.CNhs11002.456-26C58.06
thymus, embryo E17.CNhs10581.478-18C16.80
thymus, embryo E18.CNhs10595.1273-19G48.74
thymus, neonate N02.CNhs11181.1541-43F86.61
thymus, neonate N03.CNhs11137.2104-43C77.83
thymus, neonate N06.CNhs11197.681-26C46.26
thymus, neonate N07.CNhs11211.713-19D35.87
thymus, neonate N10.CNhs11194.748-24E46.65
thymus, neonate N20.CNhs11186.820-7A26.04
thymus, neonate N25.CNhs11125.1362-25G75.68
thymus, neonate N30.CNhs11132.1393-42G25.96
tongue, adult.CNhs10499.32-1B445.80
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.11
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.88
urinary bladder, adult.CNhs10481.879-12E419.51
uterus, adult pregnant day19.CNhs10497.590-15F529.09
uterus, adult.CNhs10509.92-27E514.29
vagina, adult.CNhs10502.89-27D534.30
vesicular gland, adult.CNhs10491.51-27F811.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.50
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I812.25
whole body, embryo E12.CNhs10587.857-27C914.36
whole body, embryo E13.CNhs10512.372-23H211.78
whole body, embryo E14.5.CNhs10578.420-27D212.40
whole body, embryo E14.CNhs10519.395-14B112.37
whole body, embryo E16.CNhs10514.453-14F215.99
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G512.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G512.77
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G513.16
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G513.39
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G512.67
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G518.35
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G517.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G517.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G520.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G515.88
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G517.17
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G512.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G517.08
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G513.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.20
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G517.88
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G512.06
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G516.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G516.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G517.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G513.47
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G513.29
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G515.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.55
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G515.96
whole body, embryo E17.5.CNhs10513.490-9F917.36
whole body, embryo E17.CNhs10517.475-3I517.24
whole body, embryo E18.CNhs10516.493-3B316.14
whole body, neonate N00.CNhs10525.657-19C29.88
whole body, neonate N01.CNhs10576.659-23C617.79
whole body, neonate N06.CNhs10515.692-21D122.72
whole body, neonate N10.CNhs10518.761-6B424.35





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell5.18e-0725

Uber anatomy
Ontology termp-valuen
intestine1.30e-1031
gastrointestinal system3.27e-1047
mucosa2.51e-0915
intestinal mucosa2.89e-0813
wall of intestine2.89e-0813
gastrointestinal system mucosa2.89e-0813
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