FFCP PHASE1:Mm9::chr4:8462965..8462998,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr4:8462965..8462998,+ to FFCP PHASE1:Mm9::chr4:8462965..8462998,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=59021 | |EntrezGene=59021 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=P53994,Q0PD65,Q3TEG7 | |UniProt=P53994,Q0PD65,Q3TEG7 | ||
|association_with_transcript=174bp_to_ENSMUST00000060232,NM_021518,uc008rxw.1_5end | |||
|cluster_id=chr4:8462965..8462998,+ | |||
|description=CAGE_peak_2_at_Rab2a_5end | |||
|id=chr4:8462965..8462998,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.21e-14!43;UBERON:0005409!5.40e-12!59;UBERON:0007023!1.44e-10!51;UBERON:0000344!6.91e-09!15;UBERON:0000481!1.77e-08!230;UBERON:0001242!1.01e-07!13;UBERON:0000060!1.01e-07!13;UBERON:0001262!1.01e-07!13;UBERON:0004786!1.01e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.70e-14,31;UBERON:0005409,6.26e-11,47;UBERON:0007023,1.44e-10,51;UBERON:0000344,6.90e-09,15;UBERON:0001242,1.01e-07,13;UBERON:0001262,1.01e-07,13;UBERON:0004786,1.01e-07,13 | |||
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| |phase1_expression=7.52699581392532,51.2993849229861,47.3199208965117,46.277024329945,39.0698669358151,27.5322005935499,27.099066309081,2.45334314538995,4.92760527530834,3.5109678948299,7.36237263369671,5.74359544766422,3.25281386869291,2.18551006047494,2.99798785634096,3.03712901084739,2.79824751251259,0.630924330716475,1.37114433605739,2.54633791078818,8.1641558545027,4.96454756004426,4.17919662622297,46.2378101872945,49.7818139915759,52.2551087344668,54.7067735122025,56.0225204983311,111.923794059804,76.6171594470189,72.9493380055953,0.635030673459631,0,0,13.2871745085586,17.1221684719247,13.0668388007916,4.18531630736908,7.813353445238,6.80580867165938,3.52938892818609,6.14740936462601,4.36959317728038,6.79842817068117,9.12392380975631,8.81024410376071,2.34717403304412,1.74420125104357,4.17403747195497,5.44403717407994,2.37976916763116,1.43752564364972,1.51004345451963,0.725362142011344,3.02484419228218,13.6347501099052,10.601737277734,16.5015069528782,5.86717736492834,2.64495489636016,4.43681982454325,2.37191172448392,3.55717918444456,1.7997994345628,0.988866362566974,0.7104801149461,0.898800331555214,1.15265491596466,1.97010263386108,1.75507719831198,1.47227472945967,7.42692559449889,11.0434270475807,2.08234358665422,2.49198224647415,3.67687514644008,5.50579404996943,18.8977260366078,17.5111447912118,3.42904348098504,3.93396867490361,6.25096044668112,17.3093459380856,14.069065250792,15.8910177687883,9.1334861496837,14.8066548031067,5.59198337475902,19.6888102666279,13.9807386197553,8.69593466105033,24.9522924324602,13.599426674155,22.6675340487883,44.8345728038892,38.0822854032735,19.3813299781818,14.657007741713,9.09251016110041,13.4269038313929,12.9575946194546,1.28326477414318,0,0,7.57718643539249,7.60079596425296,7.58286667522175,25.3488212976313,2.84831672011889,10.2425075954729,7.11289839741157,10.3518262626128,8.99400439298628,12.0578112442098,11.9940481278419,15.2056575508907,11.1237735480468,10.9895511259133,5.30766331169925,9.86777784679196,8.83366073841574,8.24287930329878,41.0061874679869,15.2246014446005,15.9179497178226,71.5279754584056,4.43315960671905,7.19883277192089,5.46401976414178,20.0719456802462,16.4700217014706,6.15706325353036,29.3763101124947,29.6629930503183,14.3373750746096,19.7934340942664,10.5912938404329,11.5698482667387,17.1851475734899,13.8891624885073,3.513251959993,4.59804208866946,4.50155324513373,5.42537344208574,4.42237244483631,3.58718416797579,4.96619140166563,9.05461797586555,0.646703978798527,3.02569728268511,5.63043597324636,6.79506770525482,6.11703948296315,9.05455632957633,7.81972118350185,5.57295947091781,1.40442637462647,6.94839349209731,5.11494298912067,7.87077935634907,7.50483391939508,10.0834754418168,7.81257627431194,9.05115466038058,10.4901636763417,9.76642567951713,10.4626626545851,9.92505410120941,11.5191894939436,13.790066982644,11.7549773841491,15.2047986922346,14.7098577245004,14.3600868073598,35.7492912559016,7.71784592844633,131.837094410535,55.5346189993443,6.61193576659225,5.80591679651096,9.27845721519072,13.9161631990106,18.902133726814,25.4902338990829,56.4689583237969,30.304607669218,24.8821856712267,28.6497319739257,29.0496489807489,59.3220809711786,80.619492603261,66.5131852669586,3.22435431620239,6.28366819353509,5.63538678365402,6.72049381889537,5.62462212786115,7.22398944870281,8.78987866027176,12.6944727262458,14.7578804170892,12.9567022117891,31.1275258441506,4.33797274861845,5.50365186316968,5.8464149220062,4.05720242777006,6.02942899381042,7.63877555344259,4.89083433666378,8.43103179230184,13.7280706594041,7.18841032636773,15.2577788544086,16.8500343481863,24.5001511608698,25.4744327201115,29.4290548031654,10.3461786493299,4.9267767060326,5.70377417547091,3.73439188705414,5.39787571063555,7.53778158488171,6.42717830392237,7.41507861859636,9.77337893458384,9.08005227559977,9.08892181347676,9.17634562408133,11.7425787668809,10.7040303350319,1.50791283939272,1.63171705145613,11.3105782794378,9.10591262805617,21.1926778783885,21.332526959781,10.1639666133539,8.07906967053994,5.67914794949262,8.19921363022941,5.81643173878557,5.25731355495614,6.90675889655422,5.09537755419898,6.8817819284732,6.72188473196017,6.32460444714438,10.2822821254978,12.2068473279111,8.01295216502649,9.93610452056814,4.78413356620353,15.9294166007955,5.34117399540959,6.04647113929502,11.127699705598,6.79194353625777,12.912276213645,13.9551278310839,13.0872142611902,11.4079161083111,19.9103157499564,18.9753495434998,19.5957532171555,15.3197822589205,3.96134406868882,2.97524972700335,5.35842587578981,7.44828981297549,5.70780216326626,8.39200005070817,5.48036908406279,13.6109590676952,13.7690846061483,36.6077140771237,7.58476763530808,6.29711264114032,7.84068024066026,7.99794704821014,7.55048138827282,48.9687805538149,20.3967832211561,3.58828849675491,5.57244543500701,4.44466865687308,2.26042148405629,2.59719032669948,2.28778173206523,2.54967644990783,2.93898049879682,4.42239916174156,68.7362844970882,3.79603192297362,6.70954241518601,10.9085394230019,12.54529776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| ||
|short_description=p2@Rab2a | |||
}} | }} |
Latest revision as of 06:11, 27 September 2015
Short description: | p2@Rab2a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rab2a_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 174bp_to_ENSMUST00000060232, NM_021518, uc008rxw.1_5end |
EntrezGene: | Rab2a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 3.70e-14 | 31 |
gastrointestinal system | 6.26e-11 | 47 |
adult organism | 1.44e-10 | 51 |
mucosa | 6.90e-09 | 15 |
intestinal mucosa | 1.01e-07 | 13 |
wall of intestine | 1.01e-07 | 13 |
gastrointestinal system mucosa | 1.01e-07 | 13 |