FF:12191-129B4: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=RNA-Seq@SAMD00013691 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008065;DRR008937;DRZ000362;DRZ001747;DRZ011712;DRZ013097!RNA-Seq;DRX012348;DRR013796;DRZ002997; | ||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000791,CL:0000084,CL:0000789,CL:0002419,CL:0000625 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000030 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090309%252c%2520donation2.CNhs12178.12191-129B4.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090309%252c%2520donation2.CNhs12178.12191-129B4.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090309%252c%2520donation2.CNhs12178.12191-129B4.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090309%252c%2520donation2.CNhs12178.12191-129B4.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090309%252c%2520donation2.CNhs12178.12191-129B4.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:12191-129B4 | |id=FF:12191-129B4 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000030;;FF:0000210 | ||
|is_obsolete= | |||
|library_id=CNhs12178!RDhi10015 | |||
|library_id_phase_based=2:CNhs12178 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12191 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12191 | |||
|name=CD8+ T Cells (pluriselect), donor090309, donation2 | |name=CD8+ T Cells (pluriselect), donor090309, donation2 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12178,LSID975,release011,COMPLETED | |profile_hcage=CNhs12178,LSID975,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=129 | |rna_box=129 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=1.87812 | |rna_weight_ug=1.87812 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;8.02057681425716e-220!GO:0043227;membrane-bound organelle;2.53779726799415e-194!GO:0043231;intracellular membrane-bound organelle;5.99603653277001e-194!GO:0043226;organelle;3.45294758652359e-179!GO:0043229;intracellular organelle;1.53568661768104e-178!GO:0005737;cytoplasm;8.00802233554064e-134!GO:0044422;organelle part;4.31506299772528e-115!GO:0044446;intracellular organelle part;2.30709174440719e-113!GO:0032991;macromolecular complex;3.83331973662558e-97!GO:0044444;cytoplasmic part;5.86249585031825e-97!GO:0005634;nucleus;2.50321708940508e-96!GO:0043170;macromolecule metabolic process;1.43501507845994e-94!GO:0044237;cellular metabolic process;2.75793544340684e-94!GO:0030529;ribonucleoprotein complex;5.68114854403066e-90!GO:0044238;primary metabolic process;6.01245016269459e-89!GO:0003723;RNA binding;1.27014340553973e-77!GO:0044428;nuclear part;1.26556326262599e-76!GO:0043233;organelle lumen;2.00923825417348e-67!GO:0031974;membrane-enclosed lumen;2.00923825417348e-67!GO:0043283;biopolymer metabolic process;5.22709364353081e-63!GO:0005739;mitochondrion;2.1659193375158e-60!GO:0010467;gene expression;9.66149928382956e-59!GO:0006396;RNA processing;1.84591134290786e-56!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.40077159943126e-52!GO:0006412;translation;2.77461380834601e-51!GO:0005840;ribosome;5.79913235004488e-51!GO:0005515;protein binding;9.40404437569498e-49!GO:0019538;protein metabolic process;3.0421511045721e-48!GO:0033036;macromolecule localization;5.90486979738201e-47!GO:0043234;protein complex;1.14142526380938e-46!GO:0031981;nuclear lumen;1.19746974542505e-46!GO:0044267;cellular protein metabolic process;2.5541063531689e-46!GO:0044260;cellular macromolecule metabolic process;1.20540674766607e-45!GO:0016071;mRNA metabolic process;3.93245422546763e-45!GO:0015031;protein transport;9.48206203125127e-45!GO:0003735;structural constituent of ribosome;2.61801763530733e-44!GO:0045184;establishment of protein localization;1.2555438000619e-43!GO:0008104;protein localization;2.85708362670923e-43!GO:0044429;mitochondrial part;5.40788416484767e-43!GO:0031090;organelle membrane;1.54104449255463e-40!GO:0008380;RNA splicing;2.42428127016132e-40!GO:0006397;mRNA processing;2.09023684030735e-39!GO:0009059;macromolecule biosynthetic process;3.65772155962686e-39!GO:0003676;nucleic acid binding;1.18917925990328e-38!GO:0031967;organelle envelope;3.21060884463754e-38!GO:0033279;ribosomal subunit;3.21060884463754e-38!GO:0031975;envelope;6.79245601928046e-38!GO:0005829;cytosol;2.48819956957174e-32!GO:0046907;intracellular transport;2.89925419855616e-32!GO:0022613;ribonucleoprotein complex biogenesis and assembly;6.05057135685925e-32!GO:0016070;RNA metabolic process;9.3449994412486e-31!GO:0044249;cellular biosynthetic process;1.32281731820283e-30!GO:0005681;spliceosome;2.21443016924736e-30!GO:0006886;intracellular protein transport;3.1040153278612e-30!GO:0009058;biosynthetic process;3.35219190772455e-30!GO:0016043;cellular component organization and biogenesis;1.54082276993799e-29!GO:0006259;DNA metabolic process;2.32350180006608e-29!GO:0005654;nucleoplasm;5.87968443214057e-29!GO:0065003;macromolecular complex assembly;1.60133289740204e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.2845755194075e-28!GO:0005740;mitochondrial envelope;1.70024006279082e-26!GO:0019866;organelle inner membrane;4.80837650417472e-26!GO:0044445;cytosolic part;6.60077764980073e-26!GO:0031966;mitochondrial membrane;1.0822267852819e-25!GO:0022607;cellular component assembly;2.07177078539834e-25!GO:0005743;mitochondrial inner membrane;5.8336365092393e-24!GO:0000166;nucleotide binding;1.99644973161831e-23!GO:0006512;ubiquitin cycle;2.02939150404443e-23!GO:0051641;cellular localization;2.4820780677034e-23!GO:0051649;establishment of cellular localization;4.50257176407106e-23!GO:0044451;nucleoplasm part;1.41126646790392e-22!GO:0006996;organelle organization and biogenesis;1.09574304326808e-21!GO:0006119;oxidative phosphorylation;3.74292850499754e-21!GO:0044455;mitochondrial membrane part;2.71901507427353e-20!GO:0015934;large ribosomal subunit;1.29180016784534e-19!GO:0015935;small ribosomal subunit;1.40302290790024e-19!GO:0022618;protein-RNA complex assembly;1.99540915204851e-19!GO:0016874;ligase activity;3.25183988841055e-19!GO:0031980;mitochondrial lumen;3.64545355291886e-19!GO:0005759;mitochondrial matrix;3.64545355291886e-19!GO:0044265;cellular macromolecule catabolic process;4.0870835536987e-19!GO:0005730;nucleolus;4.22887348097509e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.88496116270805e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;5.15846413986137e-18!GO:0016462;pyrophosphatase activity;5.56073295100096e-18!GO:0016817;hydrolase activity, acting on acid anhydrides;6.40678083342519e-18!GO:0019941;modification-dependent protein catabolic process;8.92294874410583e-18!GO:0043632;modification-dependent macromolecule catabolic process;8.92294874410583e-18!GO:0012501;programmed cell death;1.05153187449856e-17!GO:0044257;cellular protein catabolic process;1.17540843787176e-17!GO:0017111;nucleoside-triphosphatase activity;1.56308731206299e-17!GO:0006915;apoptosis;1.6134922040785e-17!GO:0006511;ubiquitin-dependent protein catabolic process;1.73174701321606e-17!GO:0043412;biopolymer modification;2.23912231459875e-17!GO:0043228;non-membrane-bound organelle;2.92138591155994e-17!GO:0043232;intracellular non-membrane-bound organelle;2.92138591155994e-17!GO:0008219;cell death;4.91291810259433e-17!GO:0016265;death;4.91291810259433e-17!GO:0006457;protein folding;6.34333581979882e-17!GO:0016604;nuclear body;1.4314497211147e-16!GO:0006605;protein targeting;1.44388828645669e-16!GO:0043285;biopolymer catabolic process;1.45740330095401e-16!GO:0032553;ribonucleotide binding;1.61259504098893e-16!GO:0032555;purine ribonucleotide binding;1.61259504098893e-16!GO:0005746;mitochondrial respiratory chain;1.96039537789098e-16!GO:0008135;translation factor activity, nucleic acid binding;3.51840081602166e-16!GO:0017076;purine nucleotide binding;6.19800339373763e-16!GO:0000398;nuclear mRNA splicing, via spliceosome;2.80552016218197e-15!GO:0000375;RNA splicing, via transesterification reactions;2.80552016218197e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.80552016218197e-15!GO:0000502;proteasome complex (sensu Eukaryota);3.08780863683281e-15!GO:0009057;macromolecule catabolic process;4.22152330282736e-15!GO:0006464;protein modification process;5.63822836431435e-15!GO:0012505;endomembrane system;5.67571993811377e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.42359886485192e-14!GO:0050136;NADH dehydrogenase (quinone) activity;1.42359886485192e-14!GO:0003954;NADH dehydrogenase activity;1.42359886485192e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.42359886485192e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.50872337734726e-14!GO:0051276;chromosome organization and biogenesis;1.75012539955011e-14!GO:0006325;establishment and/or maintenance of chromatin architecture;1.75026080464295e-14!GO:0006974;response to DNA damage stimulus;2.11887563220814e-14!GO:0016887;ATPase activity;2.18704025622719e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.60544877253401e-14!GO:0042623;ATPase activity, coupled;3.14166839997293e-14!GO:0005524;ATP binding;4.97187086167525e-14!GO:0005761;mitochondrial ribosome;7.17997557230205e-14!GO:0000313;organellar ribosome;7.17997557230205e-14!GO:0006323;DNA packaging;7.35443227783717e-14!GO:0032559;adenyl ribonucleotide binding;1.82909167853313e-13!GO:0006913;nucleocytoplasmic transport;1.87503555326903e-13!GO:0042254;ribosome biogenesis and assembly;1.88318859070129e-13!GO:0043687;post-translational protein modification;2.11034216213511e-13!GO:0016607;nuclear speck;2.14016962740713e-13!GO:0051169;nuclear transport;3.0576485799227e-13!GO:0006281;DNA repair;4.02712421509306e-13!GO:0042775;organelle ATP synthesis coupled electron transport;4.52851965764039e-13!GO:0042773;ATP synthesis coupled electron transport;4.52851965764039e-13!GO:0030554;adenyl nucleotide binding;8.76913393203435e-13!GO:0030964;NADH dehydrogenase complex (quinone);8.76913393203435e-13!GO:0045271;respiratory chain complex I;8.76913393203435e-13!GO:0005747;mitochondrial respiratory chain complex I;8.76913393203435e-13!GO:0008134;transcription factor binding;9.21634629840703e-13!GO:0030163;protein catabolic process;1.03251524394615e-12!GO:0005635;nuclear envelope;1.28239983020228e-12!GO:0003743;translation initiation factor activity;2.0591679827949e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.72758700195727e-12!GO:0044248;cellular catabolic process;3.21866923943666e-12!GO:0042981;regulation of apoptosis;4.57434588912827e-12!GO:0043067;regulation of programmed cell death;5.05859431016575e-12!GO:0031965;nuclear membrane;6.0554548126387e-12!GO:0006413;translational initiation;7.68106989591597e-12!GO:0048193;Golgi vesicle transport;1.24732851949113e-11!GO:0004386;helicase activity;1.41405174874144e-11!GO:0050794;regulation of cellular process;1.45695760490023e-11!GO:0051082;unfolded protein binding;2.83421962091827e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.56626013953423e-11!GO:0048770;pigment granule;3.58835304911393e-11!GO:0042470;melanosome;3.58835304911393e-11!GO:0007049;cell cycle;7.91448684692975e-11!GO:0008639;small protein conjugating enzyme activity;1.3053847405044e-10!GO:0006446;regulation of translational initiation;2.07183779994432e-10!GO:0017038;protein import;2.10020245503985e-10!GO:0004842;ubiquitin-protein ligase activity;2.53206190757639e-10!GO:0006333;chromatin assembly or disassembly;2.54352360927627e-10!GO:0051186;cofactor metabolic process;2.60473875127548e-10!GO:0065004;protein-DNA complex assembly;3.23391939824454e-10!GO:0008026;ATP-dependent helicase activity;4.44205757054998e-10!GO:0016568;chromatin modification;4.55205011584633e-10!GO:0044453;nuclear membrane part;4.90738463964258e-10!GO:0019787;small conjugating protein ligase activity;4.90738463964258e-10!GO:0005694;chromosome;5.6526865300848e-10!GO:0006399;tRNA metabolic process;9.35873564491065e-10!GO:0016072;rRNA metabolic process;1.06293791942312e-09!GO:0019222;regulation of metabolic process;1.27973198321078e-09!GO:0006364;rRNA processing;1.49283853343134e-09!GO:0019829;cation-transporting ATPase activity;1.57858388119674e-09!GO:0005794;Golgi apparatus;1.57858388119674e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.9334658529607e-09!GO:0050657;nucleic acid transport;3.7989914482164e-09!GO:0051236;establishment of RNA localization;3.7989914482164e-09!GO:0050658;RNA transport;3.7989914482164e-09!GO:0006403;RNA localization;4.6804952629366e-09!GO:0009259;ribonucleotide metabolic process;7.60140985967307e-09!GO:0030532;small nuclear ribonucleoprotein complex;1.13447588019121e-08!GO:0006164;purine nucleotide biosynthetic process;1.18648596110309e-08!GO:0016192;vesicle-mediated transport;1.36756240591414e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.39973605951074e-08!GO:0009260;ribonucleotide biosynthetic process;1.59454042366208e-08!GO:0044427;chromosomal part;1.70105959306752e-08!GO:0005643;nuclear pore;1.71084654898834e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.71982214987672e-08!GO:0009719;response to endogenous stimulus;1.74439347787745e-08!GO:0015078;hydrogen ion transmembrane transporter activity;1.81028760826806e-08!GO:0005839;proteasome core complex (sensu Eukaryota);2.0054430824005e-08!GO:0006163;purine nucleotide metabolic process;2.02303676751957e-08!GO:0022402;cell cycle process;2.27167257392504e-08!GO:0006732;coenzyme metabolic process;2.57824572509752e-08!GO:0065002;intracellular protein transport across a membrane;2.67729704899787e-08!GO:0009152;purine ribonucleotide biosynthetic process;2.67745962737666e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.92132145000355e-08!GO:0043566;structure-specific DNA binding;4.05123213324289e-08!GO:0009060;aerobic respiration;4.63534676856469e-08!GO:0009150;purine ribonucleotide metabolic process;4.93472667567838e-08!GO:0008565;protein transporter activity;5.06509689712087e-08!GO:0031323;regulation of cellular metabolic process;5.90657358751035e-08!GO:0016881;acid-amino acid ligase activity;6.06502220395622e-08!GO:0004298;threonine endopeptidase activity;6.61613150718931e-08!GO:0016787;hydrolase activity;7.1645608568274e-08!GO:0003712;transcription cofactor activity;7.67209704354842e-08!GO:0005768;endosome;8.15302770094994e-08!GO:0000785;chromatin;9.64806168432165e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.1900622595873e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.20517548119034e-07!GO:0051028;mRNA transport;1.29910248408293e-07!GO:0044432;endoplasmic reticulum part;1.37058025766954e-07!GO:0051726;regulation of cell cycle;1.38204228625566e-07!GO:0003697;single-stranded DNA binding;1.39511325413456e-07!GO:0015986;ATP synthesis coupled proton transport;1.4016582417508e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.4016582417508e-07!GO:0050789;regulation of biological process;1.53651041939946e-07!GO:0006350;transcription;2.01769145010012e-07!GO:0000074;regulation of progression through cell cycle;2.03058560326104e-07!GO:0016779;nucleotidyltransferase activity;2.1712251511572e-07!GO:0006888;ER to Golgi vesicle-mediated transport;2.57442023895315e-07!GO:0000245;spliceosome assembly;2.89311574040665e-07!GO:0006793;phosphorus metabolic process;2.89689036862163e-07!GO:0006796;phosphate metabolic process;2.89689036862163e-07!GO:0009055;electron carrier activity;3.3178943223477e-07!GO:0008270;zinc ion binding;3.58129900496306e-07!GO:0045333;cellular respiration;3.81903483442854e-07!GO:0000151;ubiquitin ligase complex;4.66847270860763e-07!GO:0042175;nuclear envelope-endoplasmic reticulum network;5.11380012219489e-07!GO:0051170;nuclear import;5.13856730633015e-07!GO:0005783;endoplasmic reticulum;5.29399225992469e-07!GO:0046930;pore complex;5.6039823906056e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;7.84456447301612e-07!GO:0006754;ATP biosynthetic process;9.04032607888835e-07!GO:0006753;nucleoside phosphate metabolic process;9.04032607888835e-07!GO:0005789;endoplasmic reticulum membrane;9.42151913247062e-07!GO:0006606;protein import into nucleus;9.77834731465559e-07!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;1.08257622267713e-06!GO:0015399;primary active transmembrane transporter activity;1.08257622267713e-06!GO:0009142;nucleoside triphosphate biosynthetic process;1.08899607945307e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.08899607945307e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.10862532730179e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.10862532730179e-06!GO:0016310;phosphorylation;1.26426722379439e-06!GO:0031497;chromatin assembly;1.26903671599695e-06!GO:0006334;nucleosome assembly;1.43743628547274e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.45839172860517e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.52364514546378e-06!GO:0009199;ribonucleoside triphosphate metabolic process;1.77411055614428e-06!GO:0009141;nucleoside triphosphate metabolic process;1.85032077302387e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.85032077302387e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.85032077302387e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.92817033472871e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.92817033472871e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.92817033472871e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.92817033472871e-06!GO:0032446;protein modification by small protein conjugation;2.03198462545632e-06!GO:0010468;regulation of gene expression;2.06311248961637e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.07340369365413e-06!GO:0003724;RNA helicase activity;2.25231111095329e-06!GO:0046034;ATP metabolic process;2.34502778678621e-06!GO:0051246;regulation of protein metabolic process;2.46307085723261e-06!GO:0045259;proton-transporting ATP synthase complex;2.53558188552857e-06!GO:0006917;induction of apoptosis;2.56854051348949e-06!GO:0007243;protein kinase cascade;3.10606652422959e-06!GO:0003713;transcription coactivator activity;3.26045011671708e-06!GO:0043038;amino acid activation;3.36210011234876e-06!GO:0006418;tRNA aminoacylation for protein translation;3.36210011234876e-06!GO:0043039;tRNA aminoacylation;3.36210011234876e-06!GO:0009056;catabolic process;3.49361777439616e-06!GO:0007005;mitochondrion organization and biogenesis;3.69013868970576e-06!GO:0016740;transferase activity;3.83033566384069e-06!GO:0012502;induction of programmed cell death;3.90717063325954e-06!GO:0006260;DNA replication;4.46907702498643e-06!GO:0006916;anti-apoptosis;4.61404332993268e-06!GO:0051188;cofactor biosynthetic process;4.92356691289746e-06!GO:0016567;protein ubiquitination;5.10089447914879e-06!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.50737268717699e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;6.03836484618149e-06!GO:0030120;vesicle coat;6.08130418524492e-06!GO:0030662;coated vesicle membrane;6.08130418524492e-06!GO:0006099;tricarboxylic acid cycle;6.15071545482956e-06!GO:0046356;acetyl-CoA catabolic process;6.15071545482956e-06!GO:0005793;ER-Golgi intermediate compartment;7.51923239395278e-06!GO:0009615;response to virus;7.75132828103327e-06!GO:0006084;acetyl-CoA metabolic process;9.03375237720344e-06!GO:0043065;positive regulation of apoptosis;9.25342610214925e-06!GO:0006613;cotranslational protein targeting to membrane;9.66105879363263e-06!GO:0048475;coated membrane;9.70387713692949e-06!GO:0030117;membrane coat;9.70387713692949e-06!GO:0051168;nuclear export;1.06122859166375e-05!GO:0043069;negative regulation of programmed cell death;1.19064504136674e-05!GO:0043068;positive regulation of programmed cell death;1.3227957892913e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.40511094750645e-05!GO:0006461;protein complex assembly;1.41414743161393e-05!GO:0008632;apoptotic program;1.52344899623323e-05!GO:0005770;late endosome;1.81444120331034e-05!GO:0045786;negative regulation of progression through cell cycle;2.13605160386049e-05!GO:0043066;negative regulation of apoptosis;2.19931034396535e-05!GO:0048523;negative regulation of cellular process;2.25277883567271e-05!GO:0043492;ATPase activity, coupled to movement of substances;2.26696544577632e-05!GO:0065009;regulation of a molecular function;2.37764998242367e-05!GO:0032774;RNA biosynthetic process;2.39624157626456e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;2.43512816760346e-05!GO:0046914;transition metal ion binding;2.8411004372491e-05!GO:0006351;transcription, DNA-dependent;3.09469150881173e-05!GO:0005762;mitochondrial large ribosomal subunit;3.43525560537306e-05!GO:0000315;organellar large ribosomal subunit;3.43525560537306e-05!GO:0003899;DNA-directed RNA polymerase activity;3.50115797141928e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;3.50115797141928e-05!GO:0006401;RNA catabolic process;3.97457494666544e-05!GO:0016563;transcription activator activity;4.1784381570764e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;4.1784381570764e-05!GO:0043623;cellular protein complex assembly;4.21782789456648e-05!GO:0009109;coenzyme catabolic process;4.2936646054983e-05!GO:0044431;Golgi apparatus part;4.39870165181551e-05!GO:0008234;cysteine-type peptidase activity;4.41055787136515e-05!GO:0009108;coenzyme biosynthetic process;5.65794633084935e-05!GO:0045449;regulation of transcription;6.37689372653119e-05!GO:0005813;centrosome;6.49313025175773e-05!GO:0006612;protein targeting to membrane;6.7485260769439e-05!GO:0008186;RNA-dependent ATPase activity;7.04191101550865e-05!GO:0006752;group transfer coenzyme metabolic process;8.42374374960644e-05!GO:0016363;nuclear matrix;8.64815514476124e-05!GO:0001772;immunological synapse;8.70362482032424e-05!GO:0005525;GTP binding;0.000106112717406166!GO:0006366;transcription from RNA polymerase II promoter;0.000110102597048856!GO:0051187;cofactor catabolic process;0.000131302397429294!GO:0006402;mRNA catabolic process;0.000132568581895593!GO:0031324;negative regulation of cellular metabolic process;0.000141592480866769!GO:0000278;mitotic cell cycle;0.000142219279483059!GO:0044440;endosomal part;0.000144556350758311!GO:0010008;endosome membrane;0.000144556350758311!GO:0008033;tRNA processing;0.000160881577107861!GO:0019899;enzyme binding;0.000174280815107679!GO:0005773;vacuole;0.000190462473183447!GO:0000314;organellar small ribosomal subunit;0.000202410891900278!GO:0005763;mitochondrial small ribosomal subunit;0.000202410891900278!GO:0043681;protein import into mitochondrion;0.000214632146747497!GO:0009117;nucleotide metabolic process;0.000220725476407087!GO:0004004;ATP-dependent RNA helicase activity;0.000227881949634375!GO:0005885;Arp2/3 protein complex;0.000229150162989282!GO:0003729;mRNA binding;0.000229150162989282!GO:0005815;microtubule organizing center;0.000238965224179486!GO:0065007;biological regulation;0.000246839848503707!GO:0006310;DNA recombination;0.000256405301905215!GO:0016564;transcription repressor activity;0.000287325795584421!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000296449673039458!GO:0043021;ribonucleoprotein binding;0.000306991012461022!GO:0006352;transcription initiation;0.000346040926651799!GO:0007242;intracellular signaling cascade;0.000356048172170337!GO:0003690;double-stranded DNA binding;0.000361760751148724!GO:0048519;negative regulation of biological process;0.000385260626129973!GO:0003677;DNA binding;0.000427105534978584!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000428142373928981!GO:0006818;hydrogen transport;0.000429986192408747!GO:0005798;Golgi-associated vesicle;0.00043358480538578!GO:0015992;proton transport;0.000435437902140777!GO:0030384;phosphoinositide metabolic process;0.000502038251997787!GO:0044452;nucleolar part;0.000523397059459193!GO:0016197;endosome transport;0.000540430347880616!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000616000610381637!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00062356142551012!GO:0000323;lytic vacuole;0.00062356142551012!GO:0005764;lysosome;0.00062356142551012!GO:0031072;heat shock protein binding;0.000628598946694432!GO:0006891;intra-Golgi vesicle-mediated transport;0.000642401659117225!GO:0006355;regulation of transcription, DNA-dependent;0.000673283731918321!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000699977538130312!GO:0051427;hormone receptor binding;0.000737462411123484!GO:0016251;general RNA polymerase II transcription factor activity;0.000746528793131027!GO:0006417;regulation of translation;0.000802422489073282!GO:0046489;phosphoinositide biosynthetic process;0.000834896729674347!GO:0000139;Golgi membrane;0.000853176324814003!GO:0032561;guanyl ribonucleotide binding;0.000863951462331395!GO:0019001;guanyl nucleotide binding;0.000863951462331395!GO:0000786;nucleosome;0.000877800230839287!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000878221670732899!GO:0008654;phospholipid biosynthetic process;0.000940015389099045!GO:0006261;DNA-dependent DNA replication;0.00100031715792217!GO:0042101;T cell receptor complex;0.00105966308245655!GO:0004518;nuclease activity;0.00106312426344895!GO:0009892;negative regulation of metabolic process;0.00114245467131675!GO:0016481;negative regulation of transcription;0.0012234636062715!GO:0006383;transcription from RNA polymerase III promoter;0.00124508949555748!GO:0005769;early endosome;0.00129390745361768!GO:0004674;protein serine/threonine kinase activity;0.00136810559443315!GO:0035257;nuclear hormone receptor binding;0.00141966367105921!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00144220703770078!GO:0022890;inorganic cation transmembrane transporter activity;0.00147559482548165!GO:0003924;GTPase activity;0.00148946558250548!GO:0005667;transcription factor complex;0.00155113807494747!GO:0022415;viral reproductive process;0.00159463394430407!GO:0004527;exonuclease activity;0.00161855779678405!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00163753990628442!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00163753990628442!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00163753990628442!GO:0007006;mitochondrial membrane organization and biogenesis;0.00167637855980517!GO:0015631;tubulin binding;0.00183240417291206!GO:0051301;cell division;0.00189931905589782!GO:0016859;cis-trans isomerase activity;0.00189931905589782!GO:0005684;U2-dependent spliceosome;0.00198573779238118!GO:0031326;regulation of cellular biosynthetic process;0.00200632433243891!GO:0006650;glycerophospholipid metabolic process;0.00207788754867223!GO:0051252;regulation of RNA metabolic process;0.00224910718333709!GO:0042802;identical protein binding;0.00235092880833992!GO:0007034;vacuolar transport;0.00237232369761311!GO:0006414;translational elongation;0.00247756180574315!GO:0051539;4 iron, 4 sulfur cluster binding;0.00254148766002814!GO:0019867;outer membrane;0.0025459681434274!GO:0000087;M phase of mitotic cell cycle;0.00260081401247101!GO:0046474;glycerophospholipid biosynthetic process;0.00263780196070138!GO:0007264;small GTPase mediated signal transduction;0.0027374151901671!GO:0009967;positive regulation of signal transduction;0.00282773232365764!GO:0006626;protein targeting to mitochondrion;0.00291781770573641!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00295837236305071!GO:0015002;heme-copper terminal oxidase activity;0.00295837236305071!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00295837236305071!GO:0004129;cytochrome-c oxidase activity;0.00295837236305071!GO:0016853;isomerase activity;0.00302551856762582!GO:0051087;chaperone binding;0.00302704391197798!GO:0007265;Ras protein signal transduction;0.00304257291180259!GO:0022403;cell cycle phase;0.00319553020482869!GO:0030658;transport vesicle membrane;0.00323303848138196!GO:0048500;signal recognition particle;0.00323573139572486!GO:0031902;late endosome membrane;0.00326972981038602!GO:0006839;mitochondrial transport;0.00326972981038602!GO:0031968;organelle outer membrane;0.00335938749028518!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00338151216053926!GO:0060090;molecular adaptor activity;0.00340762400162039!GO:0003678;DNA helicase activity;0.00346448758014371!GO:0016741;transferase activity, transferring one-carbon groups;0.00346448758014371!GO:0008168;methyltransferase activity;0.00348395417477862!GO:0043488;regulation of mRNA stability;0.00352491072883622!GO:0043487;regulation of RNA stability;0.00352491072883622!GO:0005741;mitochondrial outer membrane;0.00353893601419788!GO:0006611;protein export from nucleus;0.00365052191051682!GO:0006302;double-strand break repair;0.00407175682931623!GO:0005774;vacuolar membrane;0.0040850556329911!GO:0007067;mitosis;0.00414781941493515!GO:0006338;chromatin remodeling;0.00434276250852538!GO:0003746;translation elongation factor activity;0.00442706992655574!GO:0051920;peroxiredoxin activity;0.00445590248268413!GO:0006405;RNA export from nucleus;0.00459712078853584!GO:0050790;regulation of catalytic activity;0.00478877102321342!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00480211414813279!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00480211414813279!GO:0042110;T cell activation;0.00490107177998147!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00493026579244883!GO:0045047;protein targeting to ER;0.00493026579244883!GO:0005637;nuclear inner membrane;0.00499284728739354!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.005128558189903!GO:0003684;damaged DNA binding;0.00515297089102499!GO:0000049;tRNA binding;0.00534010233097227!GO:0016584;nucleosome positioning;0.00540878835652165!GO:0019783;small conjugating protein-specific protease activity;0.00547295805249273!GO:0004532;exoribonuclease activity;0.00547295805249273!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00547295805249273!GO:0051789;response to protein stimulus;0.00549563163738152!GO:0006986;response to unfolded protein;0.00549563163738152!GO:0032940;secretion by cell;0.00561637447612053!GO:0048522;positive regulation of cellular process;0.00570617478712384!GO:0008017;microtubule binding;0.00603336675767255!GO:0033116;ER-Golgi intermediate compartment membrane;0.00612809283558885!GO:0004843;ubiquitin-specific protease activity;0.00617126210266249!GO:0006289;nucleotide-excision repair;0.00625344254297745!GO:0004197;cysteine-type endopeptidase activity;0.00625361211736624!GO:0003711;transcription elongation regulator activity;0.00629601306888273!GO:0051540;metal cluster binding;0.00629601306888273!GO:0051536;iron-sulfur cluster binding;0.00629601306888273!GO:0008312;7S RNA binding;0.00639911401328685!GO:0009165;nucleotide biosynthetic process;0.00658764033760047!GO:0006497;protein amino acid lipidation;0.0066295175552994!GO:0009889;regulation of biosynthetic process;0.00692492595347637!GO:0003725;double-stranded RNA binding;0.00725981716216964!GO:0015980;energy derivation by oxidation of organic compounds;0.00726804915165532!GO:0030660;Golgi-associated vesicle membrane;0.00734014061692278!GO:0009116;nucleoside metabolic process;0.0074682949197703!GO:0019843;rRNA binding;0.0075996888997452!GO:0030118;clathrin coat;0.0079650710377669!GO:0051092;activation of NF-kappaB transcription factor;0.00800251603312805!GO:0047485;protein N-terminus binding;0.00802194275241018!GO:0044437;vacuolar part;0.00815430784382346!GO:0006607;NLS-bearing substrate import into nucleus;0.00844469618961866!GO:0015630;microtubule cytoskeleton;0.00861211790501259!GO:0031252;leading edge;0.00864354989100266!GO:0048471;perinuclear region of cytoplasm;0.0087337981168664!GO:0048487;beta-tubulin binding;0.00893867258863393!GO:0003682;chromatin binding;0.00894833016340472!GO:0000209;protein polyubiquitination;0.00903319162308941!GO:0008408;3'-5' exonuclease activity;0.00906389812445998!GO:0051098;regulation of binding;0.00907474616869506!GO:0005669;transcription factor TFIID complex;0.00907474616869506!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00911704729492434!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00941732246093776!GO:0032259;methylation;0.00991099500875426!GO:0005765;lysosomal membrane;0.0100393106339353!GO:0004221;ubiquitin thiolesterase activity;0.010081664935865!GO:0046966;thyroid hormone receptor binding;0.0101531944736677!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0102439875509598!GO:0006506;GPI anchor biosynthetic process;0.0102439875509598!GO:0045454;cell redox homeostasis;0.0107765737422814!GO:0045045;secretory pathway;0.0110735986099106!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0114307318180868!GO:0016272;prefoldin complex;0.0123436249739037!GO:0006505;GPI anchor metabolic process;0.0132036637137814!GO:0008624;induction of apoptosis by extracellular signals;0.0136037046403574!GO:0044438;microbody part;0.0136037046403574!GO:0044439;peroxisomal part;0.0136037046403574!GO:0005777;peroxisome;0.014514662736709!GO:0042579;microbody;0.014514662736709!GO:0005869;dynactin complex;0.0145778106973804!GO:0008047;enzyme activator activity;0.0145862160418742!GO:0003714;transcription corepressor activity;0.0148107109856477!GO:0042287;MHC protein binding;0.0151829794723895!GO:0006376;mRNA splice site selection;0.0151946412343214!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0151946412343214!GO:0022406;membrane docking;0.0152157897837712!GO:0048278;vesicle docking;0.0152157897837712!GO:0032200;telomere organization and biogenesis;0.0152277077396673!GO:0000723;telomere maintenance;0.0152277077396673!GO:0022411;cellular component disassembly;0.0153068548808438!GO:0008097;5S rRNA binding;0.0153595195567422!GO:0046649;lymphocyte activation;0.0157273432106303!GO:0000178;exosome (RNase complex);0.0157717440713355!GO:0016585;chromatin remodeling complex;0.0158010186993328!GO:0008022;protein C-terminus binding;0.0159535170797511!GO:0005657;replication fork;0.0161631114400956!GO:0031982;vesicle;0.0162469154338138!GO:0030137;COPI-coated vesicle;0.0163122892720471!GO:0006904;vesicle docking during exocytosis;0.0164421003801765!GO:0030663;COPI coated vesicle membrane;0.0164878770136983!GO:0030126;COPI vesicle coat;0.0164878770136983!GO:0043414;biopolymer methylation;0.0167579478435017!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0169422856519497!GO:0010257;NADH dehydrogenase complex assembly;0.0169422856519497!GO:0033108;mitochondrial respiratory chain complex assembly;0.0169422856519497!GO:0031625;ubiquitin protein ligase binding;0.0169773859128162!GO:0050811;GABA receptor binding;0.0170254230394716!GO:0042158;lipoprotein biosynthetic process;0.0180088588146381!GO:0030880;RNA polymerase complex;0.0181082874165841!GO:0031988;membrane-bound vesicle;0.0181193790199756!GO:0030521;androgen receptor signaling pathway;0.0186476635022925!GO:0006091;generation of precursor metabolites and energy;0.0189016351056521!GO:0005048;signal sequence binding;0.0189144263175533!GO:0005083;small GTPase regulator activity;0.0189144263175533!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0190449584318188!GO:0046467;membrane lipid biosynthetic process;0.0195797340685648!GO:0031903;microbody membrane;0.0196475445116817!GO:0005778;peroxisomal membrane;0.0196475445116817!GO:0019058;viral infectious cycle;0.019882972534072!GO:0030695;GTPase regulator activity;0.0199035309902005!GO:0051052;regulation of DNA metabolic process;0.0199587261306445!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0199587261306445!GO:0000738;DNA catabolic process, exonucleolytic;0.020047007977057!GO:0030258;lipid modification;0.0204371489085719!GO:0000287;magnesium ion binding;0.0205112682500431!GO:0051090;regulation of transcription factor activity;0.020515083152611!GO:0016605;PML body;0.0207847526834994!GO:0007050;cell cycle arrest;0.0211646891827585!GO:0009112;nucleobase metabolic process;0.0212252946198444!GO:0007041;lysosomal transport;0.0214542547682397!GO:0005521;lamin binding;0.0215091369611846!GO:0051251;positive regulation of lymphocyte activation;0.0217240680310587!GO:0004576;oligosaccharyl transferase activity;0.0219083105301776!GO:0030125;clathrin vesicle coat;0.0225939553789913!GO:0030665;clathrin coated vesicle membrane;0.0225939553789913!GO:0043281;regulation of caspase activity;0.0231522385414374!GO:0043022;ribosome binding;0.0231530643886159!GO:0043621;protein self-association;0.0244097961684607!GO:0008094;DNA-dependent ATPase activity;0.0244728692622474!GO:0050852;T cell receptor signaling pathway;0.0244876890955945!GO:0040029;regulation of gene expression, epigenetic;0.0244876890955945!GO:0019079;viral genome replication;0.0265381852218648!GO:0051336;regulation of hydrolase activity;0.0270874161207458!GO:0008287;protein serine/threonine phosphatase complex;0.0270874161207458!GO:0006914;autophagy;0.0270874161207458!GO:0031124;mRNA 3'-end processing;0.0278969956754454!GO:0045892;negative regulation of transcription, DNA-dependent;0.0278969956754454!GO:0000776;kinetochore;0.0280080382782894!GO:0001784;phosphotyrosine binding;0.0280411398251642!GO:0000118;histone deacetylase complex;0.0282611120686106!GO:0030867;rough endoplasmic reticulum membrane;0.0282611120686106!GO:0048468;cell development;0.0283664949954489!GO:0005832;chaperonin-containing T-complex;0.0284165763780905!GO:0000059;protein import into nucleus, docking;0.0287454148705767!GO:0004003;ATP-dependent DNA helicase activity;0.029390384414073!GO:0009451;RNA modification;0.0296978861355289!GO:0000175;3'-5'-exoribonuclease activity;0.0300485605050099!GO:0005070;SH3/SH2 adaptor activity;0.0300866867324989!GO:0046822;regulation of nucleocytoplasmic transport;0.0302511249469619!GO:0046979;TAP2 binding;0.0306837385615757!GO:0046977;TAP binding;0.0306837385615757!GO:0046978;TAP1 binding;0.0306837385615757!GO:0008320;protein transmembrane transporter activity;0.0309114561880821!GO:0030518;steroid hormone receptor signaling pathway;0.0313473928744098!GO:0006919;caspase activation;0.0318899342027247!GO:0000279;M phase;0.0318899342027247!GO:0006595;polyamine metabolic process;0.0320682788921895!GO:0000781;chromosome, telomeric region;0.0322385249304217!GO:0008250;oligosaccharyl transferase complex;0.0333551264221082!GO:0030132;clathrin coat of coated pit;0.0335656766796097!GO:0042608;T cell receptor binding;0.0335656766796097!GO:0030119;AP-type membrane coat adaptor complex;0.0335918944525436!GO:0030176;integral to endoplasmic reticulum membrane;0.0338318068779019!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0342325170958089!GO:0004722;protein serine/threonine phosphatase activity;0.0342494236367392!GO:0016790;thiolester hydrolase activity;0.0345169758302907!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0345169758302907!GO:0048518;positive regulation of biological process;0.0346659478562479!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0346659478562479!GO:0000428;DNA-directed RNA polymerase complex;0.0346659478562479!GO:0030127;COPII vesicle coat;0.0347611705942292!GO:0012507;ER to Golgi transport vesicle membrane;0.0347611705942292!GO:0008180;signalosome;0.0350119564258266!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0357731852391546!GO:0031123;RNA 3'-end processing;0.0358002218843176!GO:0016023;cytoplasmic membrane-bound vesicle;0.0360502102237864!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0365557785476744!GO:0006308;DNA catabolic process;0.0370012375457607!GO:0000090;mitotic anaphase;0.0370226122799377!GO:0051322;anaphase;0.0370226122799377!GO:0016763;transferase activity, transferring pentosyl groups;0.0372559692894611!GO:0031410;cytoplasmic vesicle;0.0374187253716556!GO:0009966;regulation of signal transduction;0.038240683784996!GO:0042393;histone binding;0.0386139384106043!GO:0045309;protein phosphorylated amino acid binding;0.0386163218673272!GO:0019883;antigen processing and presentation of endogenous antigen;0.0386416767182643!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0388626046365881!GO:0048002;antigen processing and presentation of peptide antigen;0.0391652252974334!GO:0007004;telomere maintenance via telomerase;0.0393161031226634!GO:0030134;ER to Golgi transport vesicle;0.0401838189887563!GO:0017134;fibroblast growth factor binding;0.0408350863500686!GO:0006284;base-excision repair;0.0410983861515834!GO:0018193;peptidyl-amino acid modification;0.0414131456183267!GO:0006144;purine base metabolic process;0.0420350627796535!GO:0000339;RNA cap binding;0.0420350627796535!GO:0015036;disulfide oxidoreductase activity;0.0420479074150983!GO:0031371;ubiquitin conjugating enzyme complex;0.042438917270323!GO:0005784;translocon complex;0.0425269230970584!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0426895943454079!GO:0022884;macromolecule transmembrane transporter activity;0.0428375822583015!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0428375822583015!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0428724619982031!GO:0007021;tubulin folding;0.0434962463738227!GO:0015923;mannosidase activity;0.0438519629127957!GO:0008538;proteasome activator activity;0.0439049780606983!GO:0030131;clathrin adaptor complex;0.0440015582584326!GO:0030911;TPR domain binding;0.0449110275037859!GO:0002483;antigen processing and presentation of endogenous peptide antigen;0.0451842166908921!GO:0019885;antigen processing and presentation of endogenous peptide antigen via MHC class I;0.0451842166908921!GO:0000123;histone acetyltransferase complex;0.0456632478289649!GO:0005819;spindle;0.046535388698437!GO:0019901;protein kinase binding;0.046535388698437!GO:0051881;regulation of mitochondrial membrane potential;0.0479574485731343!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0480152518132654!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0484334023766457!GO:0000726;non-recombinational repair;0.0488857432874351!GO:0051287;NAD binding;0.0489845347694957!GO:0003950;NAD+ ADP-ribosyltransferase activity;0.0490221101169096!GO:0043280;positive regulation of caspase activity;0.049125751273986!GO:0045321;leukocyte activation;0.0491587769239654!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.0492486946193258!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0494773159124303!GO:0043596;nuclear replication fork;0.0498359976980737!GO:0051219;phosphoprotein binding;0.0499755005093927 | |||
|sample_id=12191 | |sample_id=12191 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue=blood | |sample_tissue=blood | ||
|top_motifs=PAX3,7:2.512881346;PDX1:2.50911569941;ELF1,2,4:2.26687220952;CDX1,2,4:2.18581360338;RUNX1..3:2.07380186422;ETS1,2:1.71303600536;ELK1,4_GABP{A,B1}:1.60030434334;FOX{F1,F2,J1}:1.5788651191;LEF1_TCF7_TCF7L1,2:1.56477228308;FOX{D1,D2}:1.54954586776;FOXO1,3,4:1.43633983519;DMAP1_NCOR{1,2}_SMARC:1.32406946796;PBX1:1.32328666091;FOXA2:1.31299504908;RORA:1.26842075391;CRX:1.19489564924;T:1.18402758081;ZBTB16:1.16136809356;STAT1,3:1.15380399351;SPI1:1.15255587636;PAX6:1.13302507869;NKX2-1,4:1.13046518462;IRF1,2:1.10480963529;BPTF:1.05948628094;GATA6:0.961066062581;TLX2:0.948244865941;YY1:0.911943187233;NKX2-2,8:0.906627054277;RBPJ:0.90286887286;BREu{core}:0.899647457133;SPIB:0.882847576468;IKZF2:0.848668525992;PAX4:0.771424398029;NKX6-1,2:0.72575451896;VSX1,2:0.629049074362;TGIF1:0.605689210626;ZEB1:0.57013985953;ALX1:0.568512972227;SOX5:0.516787238247;HOX{A6,A7,B6,B7}:0.499657688555;NANOG{mouse}:0.492896782262;IRF7:0.485090374999;AR:0.483027481357;POU1F1:0.473509014281;MYOD1:0.416737334188;CUX2:0.395856346483;RXRA_VDR{dimer}:0.39156923112;SOX2:0.387315096512;HMX1:0.367431533919;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.360193889933;SNAI1..3:0.344493961646;FOXN1:0.339401414273;FOX{I1,J2}:0.333953983756;ADNP_IRX_SIX_ZHX:0.318766691361;RFX2..5_RFXANK_RFXAP:0.317789114195;FOXP1:0.314200824344;NR5A1,2:0.312380846112;NRF1:0.303366528894;CREB1:0.270883235434;PRRX1,2:0.263047487536;STAT5{A,B}:0.261727391046;NANOG:0.243609469583;NFKB1_REL_RELA:0.241241684492;ATF5_CREB3:0.225167488957;OCT4_SOX2{dimer}:0.134852092547;NFIX:0.119852536748;SPZ1:0.10481027089;TAL1_TCF{3,4,12}:0.0959357083399;ZNF143:0.0902124644233;LMO2:0.081725466132;ZNF148:0.0687837964088;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.0682083833966;EP300:0.0252612654599;NFIL3:0.00864928114613;MYB:0.00752439797359;POU2F1..3:-0.0277348192273;NFATC1..3:-0.0289119428513;STAT2,4,6:-0.0293059241272;FOXP3:-0.0315189680337;NKX3-1:-0.0351025146679;ZNF384:-0.0505465163286;NR1H4:-0.0516420167006;HMGA1,2:-0.0749243968191;PAX2:-0.101982269451;AHR_ARNT_ARNT2:-0.10570766233;HNF4A_NR2F1,2:-0.157687543467;SREBF1,2:-0.161238097978;FOXQ1:-0.1701145916;ATF2:-0.192093282128;NR3C1:-0.205391963712;HAND1,2:-0.206580962577;ARID5B:-0.220697343657;FOXD3:-0.22204552206;HNF1A:-0.244603293918;HES1:-0.291583426367;TBX4,5:-0.292315178721;E2F1..5:-0.304745112765;ALX4:-0.309538252217;PITX1..3:-0.320135976621;DBP:-0.368456998886;NFY{A,B,C}:-0.376511593795;RFX1:-0.397691107789;EVI1:-0.399171138737;CEBPA,B_DDIT3:-0.414129911363;GFI1:-0.414893091795;NKX2-3_NKX2-5:-0.417405435213;GCM1,2:-0.417482403837;NHLH1,2:-0.425860124859;MTF1:-0.432552141222;FOSL2:-0.450113849324;RREB1:-0.460698181865;HIF1A:-0.461722235163;POU5F1:-0.469315303055;MYFfamily:-0.472557120679;SMAD1..7,9:-0.478555549912;TFAP4:-0.490688697219;ATF6:-0.51631095205;AIRE:-0.529766402722;NFE2L1:-0.533444682499;FOS_FOS{B,L1}_JUN{B,D}:-0.542607721556;BACH2:-0.543450846895;ATF4:-0.550858457339;ZNF423:-0.563986884291;FOXM1:-0.577076201484;MEF2{A,B,C,D}:-0.594520163701;JUN:-0.59988367368;HBP1_HMGB_SSRP1_UBTF:-0.6059469038;MAFB:-0.62113904916;PAX5:-0.628230675302;NFE2L2:-0.646991719521;GLI1..3:-0.653076086334;HOXA9_MEIS1:-0.670877557499;HLF:-0.706987311431;NR6A1:-0.707938358434;ZFP161:-0.727990083716;NFE2:-0.776404627799;EGR1..3:-0.797883439268;TP53:-0.804676441513;HOX{A4,D4}:-0.810720190249;ONECUT1,2:-0.853458682969;SOX{8,9,10}:-0.858350145115;TOPORS:-0.859570691311;PAX8:-0.872985133121;TFCP2:-0.878631230358;ZBTB6:-0.892559320777;ESR1:-0.897518534727;REST:-0.900734105244;EN1,2:-0.912312914765;LHX3,4:-0.914025869806;CDC5L:-0.91786194452;SRF:-0.940024045971;ZNF238:-0.943654394117;PRDM1:-0.951756397144;MZF1:-0.955421998003;MED-1{core}:-0.983556933243;TEF:-0.991573710837;GFI1B:-1.01783586287;HOX{A5,B5}:-1.07071161132;POU6F1:-1.09255428051;PPARG:-1.10274091261;MAZ:-1.13429364771;MTE{core}:-1.13505899548;HSF1,2:-1.19284438522;SOX17:-1.20981727524;EBF1:-1.2113443495;MYBL2:-1.23599033195;UFEwm:-1.23917361412;NKX3-2:-1.25239673679;PATZ1:-1.25293272185;GTF2I:-1.2570344882;TFDP1:-1.26661966335;GZF1:-1.28697552695;FOXL1:-1.31887223218;TFAP2B:-1.3332506465;KLF4:-1.33379424646;XBP1:-1.34101258547;TLX1..3_NFIC{dimer}:-1.36464622027;HIC1:-1.38938328265;ESRRA:-1.42619117622;GATA4:-1.45404860958;RXR{A,B,G}:-1.48203849131;TBP:-1.50619819558;XCPE1{core}:-1.50624277545;ZIC1..3:-1.52496049889;GTF2A1,2:-1.55190106719;TEAD1:-1.58681424428;POU3F1..4:-1.61604143694;bHLH_family:-1.81569654838;TFAP2{A,C}:-1.89830824239;SP1:-1.91959829257;IKZF1:-2.27538535288;PAX1,9:-2.47728203138 | |top_motifs=PAX3,7:2.512881346;PDX1:2.50911569941;ELF1,2,4:2.26687220952;CDX1,2,4:2.18581360338;RUNX1..3:2.07380186422;ETS1,2:1.71303600536;ELK1,4_GABP{A,B1}:1.60030434334;FOX{F1,F2,J1}:1.5788651191;LEF1_TCF7_TCF7L1,2:1.56477228308;FOX{D1,D2}:1.54954586776;FOXO1,3,4:1.43633983519;DMAP1_NCOR{1,2}_SMARC:1.32406946796;PBX1:1.32328666091;FOXA2:1.31299504908;RORA:1.26842075391;CRX:1.19489564924;T:1.18402758081;ZBTB16:1.16136809356;STAT1,3:1.15380399351;SPI1:1.15255587636;PAX6:1.13302507869;NKX2-1,4:1.13046518462;IRF1,2:1.10480963529;BPTF:1.05948628094;GATA6:0.961066062581;TLX2:0.948244865941;YY1:0.911943187233;NKX2-2,8:0.906627054277;RBPJ:0.90286887286;BREu{core}:0.899647457133;SPIB:0.882847576468;IKZF2:0.848668525992;PAX4:0.771424398029;NKX6-1,2:0.72575451896;VSX1,2:0.629049074362;TGIF1:0.605689210626;ZEB1:0.57013985953;ALX1:0.568512972227;SOX5:0.516787238247;HOX{A6,A7,B6,B7}:0.499657688555;NANOG{mouse}:0.492896782262;IRF7:0.485090374999;AR:0.483027481357;POU1F1:0.473509014281;MYOD1:0.416737334188;CUX2:0.395856346483;RXRA_VDR{dimer}:0.39156923112;SOX2:0.387315096512;HMX1:0.367431533919;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.360193889933;SNAI1..3:0.344493961646;FOXN1:0.339401414273;FOX{I1,J2}:0.333953983756;ADNP_IRX_SIX_ZHX:0.318766691361;RFX2..5_RFXANK_RFXAP:0.317789114195;FOXP1:0.314200824344;NR5A1,2:0.312380846112;NRF1:0.303366528894;CREB1:0.270883235434;PRRX1,2:0.263047487536;STAT5{A,B}:0.261727391046;NANOG:0.243609469583;NFKB1_REL_RELA:0.241241684492;ATF5_CREB3:0.225167488957;OCT4_SOX2{dimer}:0.134852092547;NFIX:0.119852536748;SPZ1:0.10481027089;TAL1_TCF{3,4,12}:0.0959357083399;ZNF143:0.0902124644233;LMO2:0.081725466132;ZNF148:0.0687837964088;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.0682083833966;EP300:0.0252612654599;NFIL3:0.00864928114613;MYB:0.00752439797359;POU2F1..3:-0.0277348192273;NFATC1..3:-0.0289119428513;STAT2,4,6:-0.0293059241272;FOXP3:-0.0315189680337;NKX3-1:-0.0351025146679;ZNF384:-0.0505465163286;NR1H4:-0.0516420167006;HMGA1,2:-0.0749243968191;PAX2:-0.101982269451;AHR_ARNT_ARNT2:-0.10570766233;HNF4A_NR2F1,2:-0.157687543467;SREBF1,2:-0.161238097978;FOXQ1:-0.1701145916;ATF2:-0.192093282128;NR3C1:-0.205391963712;HAND1,2:-0.206580962577;ARID5B:-0.220697343657;FOXD3:-0.22204552206;HNF1A:-0.244603293918;HES1:-0.291583426367;TBX4,5:-0.292315178721;E2F1..5:-0.304745112765;ALX4:-0.309538252217;PITX1..3:-0.320135976621;DBP:-0.368456998886;NFY{A,B,C}:-0.376511593795;RFX1:-0.397691107789;EVI1:-0.399171138737;CEBPA,B_DDIT3:-0.414129911363;GFI1:-0.414893091795;NKX2-3_NKX2-5:-0.417405435213;GCM1,2:-0.417482403837;NHLH1,2:-0.425860124859;MTF1:-0.432552141222;FOSL2:-0.450113849324;RREB1:-0.460698181865;HIF1A:-0.461722235163;POU5F1:-0.469315303055;MYFfamily:-0.472557120679;SMAD1..7,9:-0.478555549912;TFAP4:-0.490688697219;ATF6:-0.51631095205;AIRE:-0.529766402722;NFE2L1:-0.533444682499;FOS_FOS{B,L1}_JUN{B,D}:-0.542607721556;BACH2:-0.543450846895;ATF4:-0.550858457339;ZNF423:-0.563986884291;FOXM1:-0.577076201484;MEF2{A,B,C,D}:-0.594520163701;JUN:-0.59988367368;HBP1_HMGB_SSRP1_UBTF:-0.6059469038;MAFB:-0.62113904916;PAX5:-0.628230675302;NFE2L2:-0.646991719521;GLI1..3:-0.653076086334;HOXA9_MEIS1:-0.670877557499;HLF:-0.706987311431;NR6A1:-0.707938358434;ZFP161:-0.727990083716;NFE2:-0.776404627799;EGR1..3:-0.797883439268;TP53:-0.804676441513;HOX{A4,D4}:-0.810720190249;ONECUT1,2:-0.853458682969;SOX{8,9,10}:-0.858350145115;TOPORS:-0.859570691311;PAX8:-0.872985133121;TFCP2:-0.878631230358;ZBTB6:-0.892559320777;ESR1:-0.897518534727;REST:-0.900734105244;EN1,2:-0.912312914765;LHX3,4:-0.914025869806;CDC5L:-0.91786194452;SRF:-0.940024045971;ZNF238:-0.943654394117;PRDM1:-0.951756397144;MZF1:-0.955421998003;MED-1{core}:-0.983556933243;TEF:-0.991573710837;GFI1B:-1.01783586287;HOX{A5,B5}:-1.07071161132;POU6F1:-1.09255428051;PPARG:-1.10274091261;MAZ:-1.13429364771;MTE{core}:-1.13505899548;HSF1,2:-1.19284438522;SOX17:-1.20981727524;EBF1:-1.2113443495;MYBL2:-1.23599033195;UFEwm:-1.23917361412;NKX3-2:-1.25239673679;PATZ1:-1.25293272185;GTF2I:-1.2570344882;TFDP1:-1.26661966335;GZF1:-1.28697552695;FOXL1:-1.31887223218;TFAP2B:-1.3332506465;KLF4:-1.33379424646;XBP1:-1.34101258547;TLX1..3_NFIC{dimer}:-1.36464622027;HIC1:-1.38938328265;ESRRA:-1.42619117622;GATA4:-1.45404860958;RXR{A,B,G}:-1.48203849131;TBP:-1.50619819558;XCPE1{core}:-1.50624277545;ZIC1..3:-1.52496049889;GTF2A1,2:-1.55190106719;TEAD1:-1.58681424428;POU3F1..4:-1.61604143694;bHLH_family:-1.81569654838;TFAP2{A,C}:-1.89830824239;SP1:-1.91959829257;IKZF1:-2.27538535288;PAX1,9:-2.47728203138 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12191-129B4;search_select_hide=table117:FF:12191-129B4 | |||
}} | }} | ||
Latest revision as of 18:33, 4 June 2020
| Name: | CD8+ T Cells (pluriselect), donor090309, donation2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12178,RDhi10015 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12178
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12178
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.201 |
| 10 | 10 | 0.0147 |
| 100 | 100 | 0.982 |
| 101 | 101 | 0.158 |
| 102 | 102 | 0.542 |
| 103 | 103 | 0.256 |
| 104 | 104 | 0.441 |
| 105 | 105 | 0.0916 |
| 106 | 106 | 0.843 |
| 107 | 107 | 0.265 |
| 108 | 108 | 0.858 |
| 109 | 109 | 0.0379 |
| 11 | 11 | 0.056 |
| 110 | 110 | 0.424 |
| 111 | 111 | 0.304 |
| 112 | 112 | 0.374 |
| 113 | 113 | 0.298 |
| 114 | 114 | 0.193 |
| 115 | 115 | 0.183 |
| 116 | 116 | 0.953 |
| 117 | 117 | 0.00554 |
| 118 | 118 | 0.385 |
| 119 | 119 | 0.578 |
| 12 | 12 | 0.738 |
| 120 | 120 | 0.55 |
| 121 | 121 | 0.969 |
| 122 | 122 | 0.429 |
| 123 | 123 | 0.0244 |
| 124 | 124 | 0.0224 |
| 125 | 125 | 0.625 |
| 126 | 126 | 0.364 |
| 127 | 127 | 0.654 |
| 128 | 128 | 0.796 |
| 129 | 129 | 0.139 |
| 13 | 13 | 0.501 |
| 130 | 130 | 1 |
| 131 | 131 | 0.821 |
| 132 | 132 | 0.961 |
| 133 | 133 | 0.979 |
| 134 | 134 | 0.954 |
| 135 | 135 | 0.358 |
| 136 | 136 | 0.739 |
| 137 | 137 | 0.268 |
| 138 | 138 | 0.378 |
| 139 | 139 | 0.0153 |
| 14 | 14 | 0.363 |
| 140 | 140 | 0.103 |
| 141 | 141 | 0.587 |
| 142 | 142 | 0.314 |
| 143 | 143 | 2.67382e-5 |
| 144 | 144 | 0.674 |
| 145 | 145 | 0.241 |
| 146 | 146 | 0.12 |
| 147 | 147 | 0.0327 |
| 148 | 148 | 0.12 |
| 149 | 149 | 0.994 |
| 15 | 15 | 0.0508 |
| 150 | 150 | 0.539 |
| 151 | 151 | 0.319 |
| 152 | 152 | 0.238 |
| 153 | 153 | 0.547 |
| 154 | 154 | 0.96 |
| 155 | 155 | 0.0145 |
| 156 | 156 | 0.323 |
| 157 | 157 | 0.574 |
| 158 | 158 | 0.157 |
| 159 | 159 | 0.208 |
| 16 | 16 | 0.628 |
| 160 | 160 | 0.61 |
| 161 | 161 | 0.229 |
| 162 | 162 | 0.527 |
| 163 | 163 | 0.607 |
| 164 | 164 | 0.432 |
| 165 | 165 | 0.639 |
| 166 | 166 | 0.56 |
| 167 | 167 | 0.183 |
| 168 | 168 | 0.121 |
| 169 | 169 | 0.672 |
| 17 | 17 | 0.848 |
| 18 | 18 | 0.618 |
| 19 | 19 | 0.551 |
| 2 | 2 | 0.668 |
| 20 | 20 | 0.921 |
| 21 | 21 | 0.425 |
| 22 | 22 | 0.891 |
| 23 | 23 | 0.84 |
| 24 | 24 | 0.789 |
| 25 | 25 | 0.0625 |
| 26 | 26 | 0.398 |
| 27 | 27 | 0.058 |
| 28 | 28 | 0.524 |
| 29 | 29 | 0.0478 |
| 3 | 3 | 0.0461 |
| 30 | 30 | 0.488 |
| 31 | 31 | 0.733 |
| 32 | 32 | 0.334 |
| 33 | 33 | 0.575 |
| 34 | 34 | 0.88 |
| 35 | 35 | 0.0663 |
| 36 | 36 | 0.0255 |
| 37 | 37 | 0.148 |
| 38 | 38 | 0.48 |
| 39 | 39 | 0.623 |
| 4 | 4 | 0.563 |
| 40 | 40 | 0.58 |
| 41 | 41 | 0.168 |
| 42 | 42 | 0.042 |
| 43 | 43 | 0.188 |
| 44 | 44 | 0.66 |
| 45 | 45 | 0.835 |
| 46 | 46 | 0.129 |
| 47 | 47 | 0.0526 |
| 48 | 48 | 0.126 |
| 49 | 49 | 0.0958 |
| 5 | 5 | 0.0999 |
| 50 | 50 | 0.513 |
| 51 | 51 | 0.434 |
| 52 | 52 | 0.28 |
| 53 | 53 | 0.183 |
| 54 | 54 | 0.395 |
| 55 | 55 | 0.293 |
| 56 | 56 | 0.501 |
| 57 | 57 | 0.342 |
| 58 | 58 | 0.0452 |
| 59 | 59 | 0.388 |
| 6 | 6 | 0.92 |
| 60 | 60 | 0.455 |
| 61 | 61 | 0.101 |
| 62 | 62 | 0.0212 |
| 63 | 63 | 0.605 |
| 64 | 64 | 0.178 |
| 65 | 65 | 0.623 |
| 66 | 66 | 0.891 |
| 67 | 67 | 0.956 |
| 68 | 68 | 0.664 |
| 69 | 69 | 0.871 |
| 7 | 7 | 0.149 |
| 70 | 70 | 0.00472 |
| 71 | 71 | 0.0974 |
| 72 | 72 | 0.0587 |
| 73 | 73 | 0.687 |
| 74 | 74 | 0.374 |
| 75 | 75 | 0.0246 |
| 76 | 76 | 0.342 |
| 77 | 77 | 0.604 |
| 78 | 78 | 0.11 |
| 79 | 79 | 0.273 |
| 8 | 8 | 0.649 |
| 80 | 80 | 0.00357 |
| 81 | 81 | 0.274 |
| 82 | 82 | 0.095 |
| 83 | 83 | 0.955 |
| 84 | 84 | 0.585 |
| 85 | 85 | 0.855 |
| 86 | 86 | 0.208 |
| 87 | 87 | 0.714 |
| 88 | 88 | 0.83 |
| 89 | 89 | 0.943 |
| 9 | 9 | 0.559 |
| 90 | 90 | 0.0089 |
| 91 | 91 | 0.865 |
| 92 | 92 | 0.268 |
| 93 | 93 | 0.277 |
| 94 | 94 | 0.0472 |
| 95 | 95 | 0.0171 |
| 96 | 96 | 0.0867 |
| 97 | 97 | 0.386 |
| 98 | 98 | 0.13 |
| 99 | 99 | 0.161 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12178
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000030 CD8-positive T cell sample
FF:0000210 human sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000791 (mature alpha-beta T cell)
0000084 (T cell)
0000789 (alpha-beta T cell)
0002419 (mature T cell)
0000625 (CD8-positive, alpha-beta T cell)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000030 (CD8-positive T cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)
CL:0000790 (immature alpha-beta T cell)
