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FFCP PHASE1:Mm9::chr10:106708946..106708957,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=108030
|EntrezGene=108030
|HGNC=
|HGNC=
|MCL_coexpression_id=238
|TSSclassifier=NA
|UniProt=Q3TUM0
|UniProt=Q3TUM0
|association_with_transcript=47bp_to_ENSMUST00000105280_5end
|association_with_transcript=47bp_to_ENSMUST00000105280_5end
|cluster_id=chr10:106708946..106708957,+
|description=CAGE_peak_5_at_Lin7a_5end
|description=CAGE_peak_5_at_Lin7a_5end
|id=chr10:106708946..106708957,+
|id=chr10:106708946..106708957,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!2.16e-13!102;UBERON:0000924!2.16e-13!102;UBERON:0006601!2.16e-13!102;UBERON:0002346!1.16e-12!71;UBERON:0003075!1.16e-12!71;UBERON:0007284!1.16e-12!71;UBERON:0000033!1.90e-10!63;UBERON:0001017!1.08e-09!73;UBERON:0005743!1.08e-09!73;UBERON:0000073!2.74e-09!75;UBERON:0001016!2.74e-09!75;UBERON:0003056!7.24e-09!49;UBERON:0000025!1.12e-08!114;UBERON:0002021!3.42e-08!10;UBERON:0000411!3.42e-08!10;UBERON:0001950!3.42e-08!10;UBERON:0004111!4.19e-08!122;UBERON:0000955!4.27e-08!50;UBERON:0006238!4.27e-08!50;UBERON:0001049!1.12e-07!52;UBERON:0005068!1.12e-07!52;UBERON:0006241!1.12e-07!52;UBERON:0007135!1.12e-07!52;UBERON:0002616!1.30e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.72e-17,64;UBERON:0003075,1.72e-17,64;UBERON:0007284,1.72e-17,64;UBERON:0004121,3.13e-16,95;UBERON:0000924,3.13e-16,95;UBERON:0006601,3.13e-16,95;UBERON:0010371,6.13e-15,73;UBERON:0002021,2.47e-14,10;UBERON:0000411,2.47e-14,10;UBERON:0001950,2.47e-14,10;UBERON:0001017,2.71e-14,73;UBERON:0001016,1.26e-13,75;UBERON:0003056,8.42e-13,49;UBERON:0000073,1.54e-12,54;UBERON:0000955,6.01e-11,47;UBERON:0006238,6.01e-11,47;UBERON:0001049,6.67e-11,52;UBERON:0005068,6.67e-11,52;UBERON:0006241,6.67e-11,52;UBERON:0007135,6.67e-11,52;UBERON:0010314,2.33e-10,92;UBERON:0002616,4.18e-10,46;UBERON:0002619,7.67e-09,17;UBERON:0000956,5.02e-08,21;UBERON:0001869,5.02e-08,21;UBERON:0000203,5.02e-08,21;UBERON:0000025,5.81e-08,114;UBERON:0003080,7.99e-08,40;UBERON:0002020,1.11e-07,34;UBERON:0003528,1.30e-07,29;UBERON:0002791,1.30e-07,29;UBERON:0001893,1.30e-07,29;UBERON:0000970,3.05e-07,9;UBERON:0000019,3.05e-07,9;UBERON:0000047,3.05e-07,9;UBERON:0010312,3.05e-07,9;UBERON:0004088,3.05e-07,9;UBERON:0002104,3.05e-07,9;UBERON:0001456,3.05e-07,9;UBERON:0003072,3.05e-07,9;UBERON:0004128,3.05e-07,9;UBERON:0003071,3.05e-07,9;UBERON:0002780,4.14e-07,39;UBERON:0001890,4.14e-07,39;UBERON:0006240,4.14e-07,39;UBERON:0004111,9.28e-07,122
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,0,0,0.210324961351382,0.285650984403804,0.883474163806454,0,0.0958454710182364,0,2.20231761998777,2.93680877595932,2.4577045320999,0.527545150920775,0.548925861614458,0,1.11673199600552,1.12552522006336,2.59757021220577,1.47314292736834,1.42371680799103,0.559198337475902,0.075726193333184,0.151143120213571,0.289864488701678,0.860423876981386,0.679971333707751,0.539703191637817,1.29955283489534,4.03224198387602,2.10666630197628,0,0,0,0.14084341977668,0,0,0,0,0,0,1.25602267690966,0.258937883647172,0.445326417194474,0.693941307064543,0.304465478312141,0.461230994512117,1.05505848386836,0.940709657085638,0.125666591329675,0,1.15679485535929,0,0.323533699894818,0.220841518460394,0,0,10.8328894894272,8.3778682725382,0,0,0,0,4.34392854273986,0.915001205637253,0.502617408451458,10.4294592115366,12.7857728665165,3.1168206683934,6.16516799657479,0.712875546952214,1.49288364732112,1.51633655060205,2.31486041475121,1.04096354370163,1.14951052216736,0.900310649026746,1.20563854268572,2.85753296435577,1.7935920839879,1.12442069471675,14.2286853906459,0,0.189106080167819,0,0,0.556094498451196,0,0.411564272815887,0.199034266818493,0,0,0,0.414251545071004,0.938104239924385,0.36012412292203,0.473489471170421,0.196764231747404,0.462801338662135,0.232533944750408,0.536546802799238,0.350296027101508,0,0.32833492815819,0.729619285912702,0.730999937126662,1.3173006917463,0.805238512562231,5.25724871410318,0.411618449517138,0.330418782983798,0,0,0.464473343720877,0.77320476793256,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0.38992817423824,0.898819408654221,0.216138049874694,0.199141273254367,0,0.342745537829186,0,0,0.193952487167626,0.0701358198903186,0.189709611372772,0.442830443938806,0.31399745568275,0.493588655687202,8.30067355844017,0.166845105716094,0,0.674586337154561,0.202860121388503,0.482354319504834,0,0,0,0.823684239564244,2.87536413054709,1.11642284300551,1.87222603868736,8.08252409430758,4.84373016509163,4.3419916922703,0.554259570499814,0.947457058852424,0.325929952884052,0.509235257325564,0.469380496577004,0.167506257441816,0,0,0,0,0.159454768657487,0.327726629431476,0,0,0,0,0.491764273019036,0.827810238914197,1.44495530989013,2.34423373184406,0,1.00988370881749,4.73262329124385,0.390438744296638,1.93881057959519,1.19484398976276,0.222798674082394,0.283076530788832,1.61924280669958,1.46127928955656,1.58115111178609,6.42642632843614,0.709700426041343,0,0,1.97964147567043,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0.922305443831782,0.775284879504663,0.727067458955011,0.712994756769443,0.316036757935816,1.05418608574999,0,1.02131881726136,0.540183282093931,0,0.214337035031592,0.177340233642274,0.535106452806212,0.658196082408484,0.304464949114599,0,0,0.220528398054962,0.65954501176592,1.13025098687134,0.603129249281559,0.358117032009409,0.164140899745061,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,0.648032044930808,0.418176592028937,0.218362563746178,0.269728692769641,0.41326727862668,0,0.648074866458964,0,1.12738587736838,0,0,0.777804753376191,0.645799117388655,2.02747350588934,1.64300134104056,0.2604087696879,0.209718688851422,0,0,0,0,0.821687657318618,0.25984164595559,0,0.39736270956253,0.360586348559907,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.116876902181569,0.680191150845634,0,0,0,0.19318959403219,0.563047426353546,1.28206136987086,0.428736758158132,0.501572104035363,5.64751842617067,11.9684561491866,6.30185064783336,7.38968684077857,13.0165678756422,4.5323633843382,12.8254275044043,9.45674526770863,7.25027854374727,9.31968561153276,0.207574695168353,1.59609949360412,0.853668028770671,0.243106717068294,0.838452650511929,0.551530525350042,0.666740183404846,1.03017528619447,0.320919209591815,0,1.52087579934144,0.943131706930381,0.842773567228942,0.448176066834085,1.09127391015665,0,0.927074607558844,0.964546102318525,1.64834360321323,0.294397840268795,0.342869252385415,1.06485483695602,0.953744759789284,0.436039249896986,0.282328141245992,0.507687647350059,0.182927972872773,0.526139422875686,0.679020569229309,0,0.830445126869219,0.492522411877817,0.409231043169689,0.464810523557898,0.385813221962283,0,0.467863216890817,1.07435527024149,0.956441660344217,0.882365676478062,0.695603506861264
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,0,0,0.210324961351382,0.285650984403804,0.883474163806454,0,0.0958454710182364,0,2.20231761998777,2.93680877595932,2.4577045320999,0.527545150920775,0.548925861614458,0,1.11673199600552,1.12552522006336,2.59757021220577,1.47314292736834,1.42371680799103,0.559198337475902,0.075726193333184,0.151143120213571,0.289864488701678,0.860423876981386,0.679971333707751,0.539703191637817,1.29955283489534,4.03224198387602,2.10666630197628,0,0,0,0.14084341977668,0,0,0,0,0,0,1.25602267690966,0.258937883647172,0.445326417194474,0.693941307064543,0.304465478312141,0.461230994512117,1.05505848386836,0.940709657085638,0.125666591329675,0,1.15679485535929,0,0.323533699894818,0.220841518460394,0,0,10.8328894894272,8.3778682725382,0,0,0,0,4.34392854273986,0.915001205637253,0.502617408451458,10.4294592115366,12.7857728665165,3.1168206683934,6.16516799657479,0.712875546952214,1.49288364732112,1.51633655060205,2.31486041475121,1.04096354370163,1.14951052216736,0.900310649026746,1.20563854268572,2.85753296435577,1.7935920839879,1.12442069471675,14.2286853906459,0,0.189106080167819,0,0,0.556094498451196,0,0.411564272815887,0.199034266818493,0,0,0,0.414251545071004,0.938104239924385,0.36012412292203,0.473489471170421,0.196764231747404,0.462801338662135,0.232533944750408,0.536546802799238,0.350296027101508,0,0.32833492815819,0.729619285912702,0.730999937126662,1.3173006917463,0.805238512562231,5.25724871410318,0.411618449517138,0.330418782983798,0,0,0.464473343720877,0.77320476793256,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0.38992817423824,0.898819408654221,0.216138049874694,0.199141273254367,0,0.342745537829186,0,0,0.193952487167626,0.0701358198903186,0.189709611372772,0.442830443938806,0.31399745568275,0.493588655687202,8.30067355844017,0.166845105716094,0,0.674586337154561,0.202860121388503,0.482354319504834,0,0,0,0.823684239564244,2.87536413054709,1.11642284300551,1.87222603868736,8.08252409430758,4.84373016509163,4.3419916922703,0.554259570499814,0.947457058852424,0.325929952884052,0.509235257325564,0.469380496577004,0.167506257441816,0,0,0,0,0.159454768657487,0.327726629431476,0,0,0,0,0.491764273019036,0.827810238914197,1.44495530989013,2.34423373184406,0,1.00988370881749,4.73262329124385,0.390438744296638,1.93881057959519,1.19484398976276,0.222798674082394,0.283076530788832,1.61924280669958,1.46127928955656,1.58115111178609,6.42642632843614,0.709700426041343,0,0,1.97964147567043,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0.922305443831782,0.775284879504663,0.727067458955011,0.712994756769443,0.316036757935816,1.05418608574999,0,1.02131881726136,0.540183282093931,0,0.214337035031592,0.177340233642274,0.535106452806212,0.658196082408484,0.304464949114599,0,0,0.220528398054962,0.65954501176592,1.13025098687134,0.603129249281559,0.358117032009409,0.164140899745061,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,0.648032044930808,0.418176592028937,0.218362563746178,0.269728692769641,0.41326727862668,0,0.648074866458964,0,1.12738587736838,0,0,0.777804753376191,0.645799117388655,2.02747350588934,1.64300134104056,0.2604087696879,0.209718688851422,0,0,0,0,0.821687657318618,0.25984164595559,0,0.39736270956253,0.360586348559907,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.116876902181569,0.680191150845634,0,0,0,0.19318959403219,0.563047426353546,1.28206136987086,0.428736758158132,0.501572104035363,5.64751842617067,11.9684561491866,6.30185064783336,7.38968684077857,13.0165678756422,4.5323633843382,12.8254275044043,9.45674526770863,7.25027854374727,9.31968561153276,0.207574695168353,1.59609949360412,0.853668028770671,0.243106717068294,0.838452650511929,0.551530525350042,0.666740183404846,1.03017528619447,0.320919209591815,0,1.52087579934144,0.943131706930381,0.842773567228942,0.448176066834085,1.09127391015665,0,0.927074607558844,0.964546102318525,1.64834360321323,0.294397840268795,0.342869252385415,1.06485483695602,0.953744759789284,0.436039249896986,0.282328141245992,0.507687647350059,0.182927972872773,0.526139422875686,0.679020569229309,0,0.830445126869219,0.492522411877817,0.409231043169689,0.464810523557898,0.385813221962283,0,0.467863216890817,1.07435527024149,0.956441660344217,0.882365676478062,0.695603506861264
|short_description=p5@Lin7a
|short_description=p5@Lin7a
}}
}}

Latest revision as of 13:53, 25 September 2015

Short description:p5@Lin7a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Lin7a_5end
Coexpression cluster:MCL_coexpression_mm9:238
Association with transcript: 47bp_to_ENSMUST00000105280_5end
EntrezGene:Lin7a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Lin7a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.94
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B210.83
cerebellum, neonate N30.CNhs11135.1395-42I28.38
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.34
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D510.43
cortex, neonate N30.CNhs11107.1392-42F212.79
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B26.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C62.86
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A214.23
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E85.26
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B28.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A38.08
liver, neonate N25.CNhs11198.1368-26H14.84
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A32.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.73
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I96.43
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B71.64
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.97
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.39
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.32
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm1.72e-1764
neural plate1.72e-1764
presumptive neural plate1.72e-1764
ectoderm-derived structure3.13e-1695
ectoderm3.13e-1695
presumptive ectoderm3.13e-1695
ecto-epithelium6.13e-1573
occipital lobe2.47e-1410
visual cortex2.47e-1410
neocortex2.47e-1410
central nervous system2.71e-1473
nervous system1.26e-1375
pre-chordal neural plate8.42e-1349
regional part of nervous system1.54e-1254
brain6.01e-1147
future brain6.01e-1147
neural tube6.67e-1152
neural rod6.67e-1152
future spinal cord6.67e-1152
neural keel6.67e-1152
structure with developmental contribution from neural crest2.33e-1092
regional part of brain4.18e-1046
regional part of cerebral cortex7.67e-0917
cerebral cortex5.02e-0821
cerebral hemisphere5.02e-0821
pallium5.02e-0821
tube5.81e-08114
anterior neural tube7.99e-0840
gray matter1.11e-0734
brain grey matter1.30e-0729
regional part of telencephalon1.30e-0729
telencephalon1.30e-0729
eye3.05e-079
camera-type eye3.05e-079
simple eye3.05e-079
immature eye3.05e-079
ocular region3.05e-079
visual system3.05e-079
face3.05e-079
optic cup3.05e-079
optic vesicle3.05e-079
eye primordium3.05e-079
regional part of forebrain4.14e-0739
forebrain4.14e-0739
future forebrain4.14e-0739
anatomical conduit9.28e-07122
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