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FFCP PHASE1:Mm9::chr14:16271333..16271347,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=218763
|EntrezGene=218763
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q8VCH9,Q543Z7
|UniProt=Q8VCH9,Q543Z7
|association_with_transcript=153bp_to_ENSMUST00000055211,NM_146052,uc007sgu.2_5end
|association_with_transcript=153bp_to_ENSMUST00000055211,NM_146052,uc007sgu.2_5end
|cluster_id=chr14:16271333..16271347,-
|description=CAGE_peak_3_at_Lrrc3b_5end
|description=CAGE_peak_3_at_Lrrc3b_5end
|id=chr14:16271333..16271347,-
|id=chr14:16271333..16271347,-
|ontology_enrichment_celltype=CL:0000117!4.96e-08!23;CL:0000337!4.96e-08!23;CL:0000540!8.75e-08!33;CL:0000047!8.75e-08!33;CL:0000031!8.75e-08!33;CL:0000404!8.75e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,9.87e-23,23;CL:0000337,9.87e-23,23;CL:0000540,8.15e-15,33;CL:0000047,8.15e-15,33;CL:0000031,8.15e-15,33;CL:0000404,8.15e-15,33;CL:0000393,5.07e-12,39;CL:0000211,5.07e-12,39;CL:0002319,1.35e-10,43;CL:0000221,2.80e-10,44;CL:0000133,2.80e-10,44;CL:0002612,1.34e-08,3;CL:0002614,2.42e-08,3;CL:0002610,7.20e-08,3;CL:0002611,6.71e-07,2
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.09e-13!73;UBERON:0005743!1.09e-13!73;UBERON:0000073!4.08e-13!75;UBERON:0001016!4.08e-13!75;UBERON:0001049!2.53e-11!52;UBERON:0005068!2.53e-11!52;UBERON:0006241!2.53e-11!52;UBERON:0007135!2.53e-11!52;UBERON:0002346!2.33e-10!71;UBERON:0003075!2.33e-10!71;UBERON:0007284!2.33e-10!71;UBERON:0000955!8.12e-10!50;UBERON:0006238!8.12e-10!50;UBERON:0002020!1.81e-09!34;UBERON:0002616!2.03e-09!49;UBERON:0004121!2.20e-09!102;UBERON:0000924!2.20e-09!102;UBERON:0006601!2.20e-09!102;UBERON:0000025!2.71e-09!114;UBERON:0004111!1.08e-08!122;UBERON:0000033!4.39e-08!63;UBERON:0003080!9.78e-07!40
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.25e-25,54;UBERON:0001017,2.06e-22,73;UBERON:0001049,8.67e-22,52;UBERON:0005068,8.67e-22,52;UBERON:0006241,8.67e-22,52;UBERON:0007135,8.67e-22,52;UBERON:0001016,1.18e-21,75;UBERON:0002020,5.79e-21,34;UBERON:0010314,1.87e-18,92;UBERON:0002346,9.88e-17,64;UBERON:0003075,9.88e-17,64;UBERON:0007284,9.88e-17,64;UBERON:0002240,4.52e-16,6;UBERON:0005174,4.52e-16,6;UBERON:0001137,4.52e-16,6;UBERON:0004121,7.80e-16,95;UBERON:0000924,7.80e-16,95;UBERON:0006601,7.80e-16,95;UBERON:0010371,4.95e-14,73;UBERON:0003076,7.06e-14,12;UBERON:0003057,7.06e-14,12;UBERON:0001948,7.24e-14,5;UBERON:0002315,7.24e-14,5;UBERON:0000025,1.06e-13,114;UBERON:0002616,1.66e-12,46;UBERON:0004111,2.14e-12,122;UBERON:0000955,3.69e-12,47;UBERON:0006238,3.69e-12,47;UBERON:0003528,3.69e-12,29;UBERON:0002791,3.69e-12,29;UBERON:0001893,3.69e-12,29;UBERON:0002420,3.68e-11,8;UBERON:0007245,3.68e-11,8;UBERON:0010009,3.68e-11,8;UBERON:0010011,3.68e-11,8;UBERON:0000454,3.68e-11,8;UBERON:0003080,5.42e-11,40;UBERON:0002950,2.98e-10,4;UBERON:0001891,2.98e-10,4;UBERON:0009616,2.98e-10,4;UBERON:0010286,2.98e-10,4;UBERON:0002780,7.82e-10,39;UBERON:0001890,7.82e-10,39;UBERON:0006240,7.82e-10,39;UBERON:0002021,1.04e-08,10;UBERON:0000411,1.04e-08,10;UBERON:0001950,1.04e-08,10;UBERON:0002257,1.34e-08,3;UBERON:0003056,2.16e-08,49;UBERON:0002038,2.42e-08,3;UBERON:0009663,2.42e-08,3;UBERON:0009661,2.42e-08,3;UBERON:0000125,2.42e-08,3;UBERON:0002308,2.42e-08,3;UBERON:0004684,7.20e-08,3;UBERON:0002275,7.20e-08,3;UBERON:0002256,6.71e-07,2;UBERON:0000483,7.86e-07,174
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0.17008658030214,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0.336093799142464,0,0,0,1.61853168687678,2.64495489636016,0.633831403506179,0,0,0,0,0,0,0,0,0,0,3.14216082844184,3.53389665522582,0.122490799214954,0.0958454710182364,0,1.10115880999389,1.40456071893706,1.38245879930619,2.2420668914133,1.9212405156506,0.52091337055676,1.95428099300967,1.12552522006336,2.29197371665215,2.94628585473668,2.56269025438385,1.1183966749518,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0.517875767294343,0.445326417194474,0,0.608930956624282,0.691846491768175,0,0.470354828542819,0.251333182659351,0,0.289198713839823,0,0.161766849947409,0,0,0,3.80615036115011,3.56059401582874,0,0,0,0,1.04853447583376,1.37250180845588,0.753926112677186,1.04294592115366,0.767146371990992,1.45451631191692,0,0,0,0.505445516867349,0,0.130120442962704,0,0.180062129805349,0,0.136072998302656,0.12811372028485,0.281105173679186,0,0,0,0,0.43839146485515,0,0,0,0.199034266818493,0,0,0,0.414251545071004,0,0.720248245844059,0.710234206755631,0.590292695242212,0.925602677324269,0.697601834251224,1.07309360559848,0.817357396570186,0.987359099480883,2.46251196118643,2.91847714365081,3.36259971078264,3.07370161407471,2.41571553768669,0.630869845692382,0.308713837137853,0,0,0,0.232236671860439,0.257734922644187,0,0,0,0,0,0.251335208800269,0,0,0,0,0.199141273254367,0,0.228497025219458,0,0,0.193952487167626,0.49095073923223,0.189709611372772,0.147610147979602,0.31399745568275,0.493588655687202,0,0.166845105716094,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,0,0.162964976442026,0.169745085775188,0.704070744865506,0.670025029767263,0.952174563544055,0.585400943573396,0.157635144106191,0,0.318909537314974,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,0.321101179975584,0.35163505977661,0,0.504941854408746,0.94652465824877,0,0.430846795465598,0,0,0,0.809621403349789,0.292255857911312,0.790575555893047,0.642642632843614,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0.643011105094777,0.354680467284547,0.535106452806212,0.493647061806363,0,0,0.21183207086382,0.220528398054962,0,0,0.0603129249281559,0,0,0,1.48340241608408,0,0.412773735926445,0,0.188368457004691,0,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0.418176592028937,0.218362563746178,0,0.330613822901344,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0,0,0,0.104859344425711,0,0,0.316011120628178,0,0,0.129920822977795,0,0,0,0.443068581523732,0.201932899896295,0.15241361331,0,0.194915761479505,0,0.233753804363138,0,0,0,0,0,0.375364950902364,0,0,0,0.564751842617067,1.38097570952153,3.43737308063638,0.68741272937475,0,1.5107877947794,1.35004500046361,1.35096360967266,0.453142408984205,1.55328093525546,0,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.367687016900028,0,0.206035057238894,0.962757628775446,0.252697211763798,0.50695859978048,0.377252682772152,0.468207537349412,0.0640251524048693,0.287177344778066,0,0.347652977834566,0.38581844092741,0.412085900803307,0.294397840268795,1.02860775715625,0.532427418478012,0,0.290692833264657,0.282328141245992,0.338458431566706,0.548783918618318,0.263069711437843,0,0,0.474540072496697,0.492522411877817,0.409231043169689,0.619747364743864,0.192906610981141,0.249810577937946,0.233931608445408,0.644613162144895,0.191288332068843,0.882365676478062,0.463735671240843
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0.17008658030214,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0.336093799142464,0,0,0,1.61853168687678,2.64495489636016,0.633831403506179,0,0,0,0,0,0,0,0,0,0,3.14216082844184,3.53389665522582,0.122490799214954,0.0958454710182364,0,1.10115880999389,1.40456071893706,1.38245879930619,2.2420668914133,1.9212405156506,0.52091337055676,1.95428099300967,1.12552522006336,2.29197371665215,2.94628585473668,2.56269025438385,1.1183966749518,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0.517875767294343,0.445326417194474,0,0.608930956624282,0.691846491768175,0,0.470354828542819,0.251333182659351,0,0.289198713839823,0,0.161766849947409,0,0,0,3.80615036115011,3.56059401582874,0,0,0,0,1.04853447583376,1.37250180845588,0.753926112677186,1.04294592115366,0.767146371990992,1.45451631191692,0,0,0,0.505445516867349,0,0.130120442962704,0,0.180062129805349,0,0.136072998302656,0.12811372028485,0.281105173679186,0,0,0,0,0.43839146485515,0,0,0,0.199034266818493,0,0,0,0.414251545071004,0,0.720248245844059,0.710234206755631,0.590292695242212,0.925602677324269,0.697601834251224,1.07309360559848,0.817357396570186,0.987359099480883,2.46251196118643,2.91847714365081,3.36259971078264,3.07370161407471,2.41571553768669,0.630869845692382,0.308713837137853,0,0,0,0.232236671860439,0.257734922644187,0,0,0,0,0,0.251335208800269,0,0,0,0,0.199141273254367,0,0.228497025219458,0,0,0.193952487167626,0.49095073923223,0.189709611372772,0.147610147979602,0.31399745568275,0.493588655687202,0,0.166845105716094,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,0,0.162964976442026,0.169745085775188,0.704070744865506,0.670025029767263,0.952174563544055,0.585400943573396,0.157635144106191,0,0.318909537314974,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,0.321101179975584,0.35163505977661,0,0.504941854408746,0.94652465824877,0,0.430846795465598,0,0,0,0.809621403349789,0.292255857911312,0.790575555893047,0.642642632843614,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0.643011105094777,0.354680467284547,0.535106452806212,0.493647061806363,0,0,0.21183207086382,0.220528398054962,0,0,0.0603129249281559,0,0,0,1.48340241608408,0,0.412773735926445,0,0.188368457004691,0,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0.418176592028937,0.218362563746178,0,0.330613822901344,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0,0,0,0.104859344425711,0,0,0.316011120628178,0,0,0.129920822977795,0,0,0,0.443068581523732,0.201932899896295,0.15241361331,0,0.194915761479505,0,0.233753804363138,0,0,0,0,0,0.375364950902364,0,0,0,0.564751842617067,1.38097570952153,3.43737308063638,0.68741272937475,0,1.5107877947794,1.35004500046361,1.35096360967266,0.453142408984205,1.55328093525546,0,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.367687016900028,0,0.206035057238894,0.962757628775446,0.252697211763798,0.50695859978048,0.377252682772152,0.468207537349412,0.0640251524048693,0.287177344778066,0,0.347652977834566,0.38581844092741,0.412085900803307,0.294397840268795,1.02860775715625,0.532427418478012,0,0.290692833264657,0.282328141245992,0.338458431566706,0.548783918618318,0.263069711437843,0,0,0.474540072496697,0.492522411877817,0.409231043169689,0.619747364743864,0.192906610981141,0.249810577937946,0.233931608445408,0.644613162144895,0.191288332068843,0.882365676478062,0.463735671240843
|short_description=p3@Lrrc3b
|short_description=p3@Lrrc3b
}}
}}

Latest revision as of 17:55, 25 September 2015

Short description:p3@Lrrc3b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Lrrc3b_5end
Coexpression cluster:NA
Association with transcript: 153bp_to_ENSMUST00000055211, NM_146052, uc007sgu.2_5end
EntrezGene:Lrrc3b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Lrrc3b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.92
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I23.56
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G12.46
heart, neonate N16.CNhs11209.782-15G12.92
heart, neonate N20.CNhs11127.821-26I63.36
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D22.42
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.46





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.25e-2554
central nervous system2.06e-2273
neural tube8.67e-2252
neural rod8.67e-2252
future spinal cord8.67e-2252
neural keel8.67e-2252
nervous system1.18e-2175
gray matter5.79e-2134
structure with developmental contribution from neural crest1.87e-1892
neurectoderm9.88e-1764
neural plate9.88e-1764
presumptive neural plate9.88e-1764
spinal cord4.52e-166
dorsal region element4.52e-166
dorsum4.52e-166
ectoderm-derived structure7.80e-1695
ectoderm7.80e-1695
presumptive ectoderm7.80e-1695
ecto-epithelium4.95e-1473
posterior neural tube7.06e-1412
chordal neural plate7.06e-1412
regional part of spinal cord7.24e-145
gray matter of spinal cord7.24e-145
tube1.06e-13114
regional part of brain1.66e-1246
anatomical conduit2.14e-12122
brain3.69e-1247
future brain3.69e-1247
brain grey matter3.69e-1229
regional part of telencephalon3.69e-1229
telencephalon3.69e-1229
basal ganglion3.68e-118
nuclear complex of neuraxis3.68e-118
aggregate regional part of brain3.68e-118
collection of basal ganglia3.68e-118
cerebral subcortex3.68e-118
anterior neural tube5.42e-1140
regional part of midbrain2.98e-104
midbrain2.98e-104
presumptive midbrain2.98e-104
midbrain neural tube2.98e-104
regional part of forebrain7.82e-1039
forebrain7.82e-1039
future forebrain7.82e-1039
occipital lobe1.04e-0810
visual cortex1.04e-0810
neocortex1.04e-0810
ventral horn of spinal cord1.34e-083
pre-chordal neural plate2.16e-0849
substantia nigra2.42e-083
telencephalic nucleus2.42e-083
midbrain nucleus2.42e-083
neural nucleus2.42e-083
nucleus of brain2.42e-083
raphe nuclei7.20e-083
reticular formation7.20e-083
dorsal horn of spinal cord6.71e-072
epithelium7.86e-07174
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