FFCP PHASE1:Hg19::chr10:22890056..22890058,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:22890056..22890058,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_at_chr10:22890056..22890058,- | |description=CAGE_peak_at_chr10:22890056..22890058,- | ||
|id=chr10:22890056..22890058,- | |id=chr10:22890056..22890058,- | ||
|ontology_enrichment_celltype=CL:0002087!7.68e-14!119;CL:0002031!6.55e-13!124;CL:0000738!2.31e-12!140;CL:0002032!1.39e-11!165;CL:0000837!1.39e-11!165;CL:0000037!1.75e-11!172;CL:0000566!1.75e-11!172;CL:0000988!1.89e-09!182;CL:0000542!2.81e-08!53;CL:0000051!2.81e-08!53;CL:0000838!4.97e-08!52 | |ontology_enrichment_celltype=CL:0002087!7.68e-14!119;CL:0002031!6.55e-13!124;CL:0000738!2.31e-12!140;CL:0002032!1.39e-11!165;CL:0000837!1.39e-11!165;CL:0000037!1.75e-11!172;CL:0000566!1.75e-11!172;CL:0000988!1.89e-09!182;CL:0000542!2.81e-08!53;CL:0000051!2.81e-08!53;CL:0000838!4.97e-08!52 | ||
|ontology_enrichment_celltype_v019=CL:0000623;4.00e-10;3!CL:0000791;2.87e-09;18!CL:0000789;2.87e-09;18!CL:0002419;2.87e-09;18!CL:0000624;6.88e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,3.11e-10,3;CL:0000825,3.11e-10,3;CL:0000838,1.75e-09,52;CL:0000791,2.01e-09,18;CL:0000789,2.01e-09,18;CL:0002420,2.01e-09,18;CL:0002419,2.01e-09,18;CL:0000790,2.01e-09,18;CL:0000542,3.06e-09,53;CL:0000051,3.06e-09,53;CL:0000624,3.63e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000790;2.87e-09;18!UBERON:0006601;1.67e-07;82!UBERON:0010122;4.42e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.39e-18!57;UBERON:0005068!4.39e-18!57;UBERON:0006241!4.39e-18!57;UBERON:0007135!4.39e-18!57;UBERON:0002020!7.93e-16!34;UBERON:0003528!7.93e-16!34;UBERON:0001893!1.01e-15!34;UBERON:0002780!2.42e-15!41;UBERON:0001890!2.42e-15!41;UBERON:0006240!2.42e-15!41;UBERON:0007023!2.84e-15!115;UBERON:0002791!4.31e-15!33;UBERON:0003080!1.38e-14!42;UBERON:0001869!3.07e-14!32;UBERON:0000955!7.43e-14!69;UBERON:0006238!7.43e-14!69;UBERON:0002616!2.37e-13!59;UBERON:0001017!3.50e-13!82;UBERON:0005743!2.70e-12!86;UBERON:0000073!7.20e-12!94;UBERON:0001016!7.20e-12!94;UBERON:0002346!8.50e-11!90;UBERON:0003075!1.91e-10!86;UBERON:0007284!1.91e-10!86;UBERON:0000956!1.31e-09!25;UBERON:0000203!1.31e-09!25;UBERON:0001950!4.95e-09!20;UBERON:0002619!6.59e-09!22;UBERON:0002308!2.35e-08!9;UBERON:0000125!2.35e-08!9;UBERON:0003056!2.78e-08!61;UBERON:0009663!8.76e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.93e-23;41!UBERON:0001890;1.93e-23;41!UBERON:0000125;2.70e-22;9!UBERON:0002308;2.70e-22;9!UBERON:0001893;3.46e-22;34!UBERON:0003528;5.23e-22;34!UBERON:0002020;5.23e-22;34!UBERON:0002791;1.26e-21;32!UBERON:0000073;4.45e-21;53!UBERON:0002616;4.45e-21;53!UBERON:0001869;8.20e-21;32!UBERON:0002298;3.55e-18;6!UBERON:0002420;1.17e-16;9!UBERON:0007245;1.17e-16;9!UBERON:0010009;1.17e-16;9!UBERON:0010011;1.17e-16;9!UBERON:0000454;1.17e-16;9!UBERON:0009663;2.24e-16;7!UBERON:0002619;3.85e-14;22!UBERON:0001017;4.05e-14;75!UBERON:0001950;6.93e-13;20!UBERON:0000200;7.15e-13;6!UBERON:0000956;3.17e-12;25!UBERON:0000203;3.17e-12;25!UBERON:0000955;3.35e-12;68!UBERON:0001016;4.32e-11;83!UBERON:0004732;1.21e-10;13!UBERON:0000988;2.85e-10;3!UBERON:0005383;5.60e-10;3!UBERON:0005382;5.60e-10;3!UBERON:0001896;1.27e-09;3!UBERON:0005290;1.27e-09;3!UBERON:0004733;1.01e-08;12!UBERON:0002028;1.01e-08;12!UBERON:0001897;6.12e-08;2!UBERON:0010225;6.12e-08;2!UBERON:0002784;6.30e-08;4!UBERON:0001875;7.69e-08;2!UBERON:0006514;7.69e-08;2!UBERON:0002148;9.49e-08;2!UBERON:0006331;9.49e-08;2!UBERON:0009662;9.49e-08;2!UBERON:0000369;1.42e-07;4!UBERON:0002435;1.42e-07;4!UBERON:0000204;1.42e-07;4!UBERON:0002702;1.91e-07;2!UBERON:0005162;3.15e-07;2!UBERON:0000122;3.15e-07;2!UBERON:0001873;4.42e-07;2 | |||
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| ||
|short_description=p@chr10:22890056..22890058,- | |short_description=p@chr10:22890056..22890058,- | ||
}} | }} |
Latest revision as of 12:37, 23 July 2015
Short description: | p@chr10:22890056..22890058, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:22890056..22890058, - |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 3.11e-10 | 3 |
pro-NK cell | 3.11e-10 | 3 |
lymphoid lineage restricted progenitor cell | 1.75e-09 | 52 |
mature alpha-beta T cell | 2.01e-09 | 18 |
alpha-beta T cell | 2.01e-09 | 18 |
immature T cell | 2.01e-09 | 18 |
mature T cell | 2.01e-09 | 18 |
immature alpha-beta T cell | 2.01e-09 | 18 |
lymphocyte | 3.06e-09 | 53 |
common lymphoid progenitor | 3.06e-09 | 53 |
CD4-positive, alpha-beta T cell | 3.63e-08 | 6 |