FFCP PHASE1:Mm9::chr13:110050580..110050595,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=238871 | |EntrezGene=238871 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=57 | |||
|TSSclassifier=NA | |||
|UniProt=F6QFD1 | |UniProt=F6QFD1 | ||
|association_with_transcript=-252bp_to_ENSMUST00000153234_5end | |association_with_transcript=-252bp_to_ENSMUST00000153234_5end | ||
|cluster_id=chr13:110050580..110050595,+ | |||
|description=CAGE_peak_14_at_Pde4d_5end | |description=CAGE_peak_14_at_Pde4d_5end | ||
|id=chr13:110050580..110050595,+ | |id=chr13:110050580..110050595,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.42e-13,6;CL:0000677,2.42e-13,6;CL:0000584,2.42e-13,6;CL:0000075,2.58e-11,7;CL:0002563,1.30e-08,9;CL:0002251,1.30e-08,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!5.44e-10!59;UBERON:0000160!3.42e-08!43;UBERON:0000970!1.24e-07!9;UBERON:0000019!1.24e-07!9;UBERON:0000047!1.24e-07!9;UBERON:0004088!1.24e-07!9;UBERON:0002104!1.24e-07!9;UBERON:0001456!1.24e-07!9;UBERON:0003072!1.24e-07!9;UBERON:0003071!1.24e-07!9;UBERON:0004128!1.24e-07!9;UBERON:0002108!9.11e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.57e-16,9;UBERON:0000019,1.57e-16,9;UBERON:0000047,1.57e-16,9;UBERON:0010312,1.57e-16,9;UBERON:0004088,1.57e-16,9;UBERON:0002104,1.57e-16,9;UBERON:0001456,1.57e-16,9;UBERON:0003072,1.57e-16,9;UBERON:0004128,1.57e-16,9;UBERON:0003071,1.57e-16,9;UBERON:0001444,3.23e-13,11;UBERON:0000020,5.65e-12,12;UBERON:0001032,5.65e-12,12;UBERON:0004456,5.65e-12,12;UBERON:0000033,6.34e-11,13;UBERON:0005085,6.34e-11,13;UBERON:0001264,2.76e-09,12;UBERON:0003350,1.30e-08,9;UBERON:0004808,1.30e-08,9;UBERON:0001277,1.30e-08,9;UBERON:0000485,6.81e-07,11 | |||
|phase1_expression=0.160148847104794,1.74487703819681,2.27499619694768,1.51232105653415,2.50447864973174,2.35030980676646,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.159992422793407,0.45881856213434,1.14846392823004,0.86152399231815,0.646413698057667,0.380046838912748,0.252030129759931,0.443461021310609,0,0,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0.420649922702764,0,0,0,0.0958454710182364,0,0,0,0,0,0.182975287204819,0,0,0.56276261003168,0.15279824777681,0.589257170947335,0,0.372798891650601,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0.253359865475099,0,0.11418387971906,0.258937883647172,0,0.173485326766136,0.304465478312141,0.461230994512117,0,0.23517741427141,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0,0,0,0.239630249011841,0,0.254140454146129,0,0,0.125654352112864,0,0,0,0,0.305518091550949,0,0,0.631325567659422,3.6433724029557,2.75882525320168,4.68161537493908,9.0422890701429,9.79725587779121,7.04625461566674,5.528401749024,2.32833033665114,1.72454394346274,2.26927296201383,0.351902248327898,0.43839146485515,0.278047249225598,0.696504333044333,0.61734640922383,0,0,0.257347907114715,0,0.414251545071004,1.17263029990548,0.720248245844059,0.473489471170421,0.787056926989615,0.154267112887378,0.465067889500816,0.268273401399619,0.233530684734339,0,0.164167464079095,0,0,0,0,0,0,0,0,0.426576501070468,0.464473343720877,1.80414445850931,0.403367049246685,1.11189021922435,0.570676878337677,0,0,0.502670417600539,0.596869416123452,0,0.898819408654221,0.432276099749388,0.597423819763102,0.569003702859245,0.228497025219458,0,1.01825663922657,0.193952487167626,0,0.316182685621286,0.147610147979602,0.156998727841375,0,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0.482354319504834,0,0.575392274901621,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0.369506380333209,0.37898282354097,0.162964976442026,0.169745085775188,0.234690248288502,0.837531287209079,1.42826184531608,1.36593553500459,0.945810864637146,0.8858587585951,0.797273843287435,1.80249646187312,1.38147985492716,0.578596234326046,0,0,0,0,0.160550589987792,0,0,0,0,0.390438744296638,0.215423397732799,0.716906393857656,0.445597348164788,1.13230612315533,0.809621403349789,0.292255857911312,0,1.28528526568723,0.141940085208269,0,0.488660878060728,0.164970122972535,1.32745138339963,0.242780636154981,1.209294227859,1.13163047853539,0.590603785761546,0.614870295887855,0.516856586336442,1.45413491791002,1.06949213515416,1.26414703174326,3.16255825724996,1.03135543248187,0,1.26042765821917,0,0.428674070063185,0.354680467284547,0.535106452806212,0.493647061806363,0,0.704015124191131,0.21183207086382,0,0.16488625294148,0.807322133479528,0.542816324353403,0.238744688006273,0,0.874442509889552,0,0,0.82554747185289,0.555583582109135,0,0.136694227721025,0,0.679913719975421,0.839708713941948,0.414599921413271,0.954670618015114,1.58167996790568,1.42323626988794,1.08005340821801,1.46361807210128,0.218362563746178,0.269728692769641,0.661227645802687,0.26175594198403,0.388844919875379,0,0,0,0.330916980914195,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0,0,0,0.579568782096571,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0.453142408984205,0,0.726511433089237,1.19707462020309,0.682934423016537,0.486213434136588,0,0.183843508450014,0.44449345560323,0.618105171716683,0.320919209591815,0.758091635291392,0.760437899670719,0.754505365544305,0.842773567228942,0.128050304809739,0.689225627467359,0.952587382566147,0.927074607558844,0.77163688185482,0,0.588795680537589,1.71434626192708,0.532427418478012,0.715308569841963,0.290692833264657,0.282328141245992,0.761531471025089,1.09756783723664,0.789209134313529,0.543216455383447,0,0.593175090620871,0.886540341380071,0,1.08455788830176,0.578719832943424,0.249810577937946,0,0.214871054048298,0.191288332068843,0.220591419119515,0.463735671240843 | |phase1_expression=0.160148847104794,1.74487703819681,2.27499619694768,1.51232105653415,2.50447864973174,2.35030980676646,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.159992422793407,0.45881856213434,1.14846392823004,0.86152399231815,0.646413698057667,0.380046838912748,0.252030129759931,0.443461021310609,0,0,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0.420649922702764,0,0,0,0.0958454710182364,0,0,0,0,0,0.182975287204819,0,0,0.56276261003168,0.15279824777681,0.589257170947335,0,0.372798891650601,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0.253359865475099,0,0.11418387971906,0.258937883647172,0,0.173485326766136,0.304465478312141,0.461230994512117,0,0.23517741427141,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0,0,0,0.239630249011841,0,0.254140454146129,0,0,0.125654352112864,0,0,0,0,0.305518091550949,0,0,0.631325567659422,3.6433724029557,2.75882525320168,4.68161537493908,9.0422890701429,9.79725587779121,7.04625461566674,5.528401749024,2.32833033665114,1.72454394346274,2.26927296201383,0.351902248327898,0.43839146485515,0.278047249225598,0.696504333044333,0.61734640922383,0,0,0.257347907114715,0,0.414251545071004,1.17263029990548,0.720248245844059,0.473489471170421,0.787056926989615,0.154267112887378,0.465067889500816,0.268273401399619,0.233530684734339,0,0.164167464079095,0,0,0,0,0,0,0,0,0.426576501070468,0.464473343720877,1.80414445850931,0.403367049246685,1.11189021922435,0.570676878337677,0,0,0.502670417600539,0.596869416123452,0,0.898819408654221,0.432276099749388,0.597423819763102,0.569003702859245,0.228497025219458,0,1.01825663922657,0.193952487167626,0,0.316182685621286,0.147610147979602,0.156998727841375,0,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0.482354319504834,0,0.575392274901621,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0.369506380333209,0.37898282354097,0.162964976442026,0.169745085775188,0.234690248288502,0.837531287209079,1.42826184531608,1.36593553500459,0.945810864637146,0.8858587585951,0.797273843287435,1.80249646187312,1.38147985492716,0.578596234326046,0,0,0,0,0.160550589987792,0,0,0,0,0.390438744296638,0.215423397732799,0.716906393857656,0.445597348164788,1.13230612315533,0.809621403349789,0.292255857911312,0,1.28528526568723,0.141940085208269,0,0.488660878060728,0.164970122972535,1.32745138339963,0.242780636154981,1.209294227859,1.13163047853539,0.590603785761546,0.614870295887855,0.516856586336442,1.45413491791002,1.06949213515416,1.26414703174326,3.16255825724996,1.03135543248187,0,1.26042765821917,0,0.428674070063185,0.354680467284547,0.535106452806212,0.493647061806363,0,0.704015124191131,0.21183207086382,0,0.16488625294148,0.807322133479528,0.542816324353403,0.238744688006273,0,0.874442509889552,0,0,0.82554747185289,0.555583582109135,0,0.136694227721025,0,0.679913719975421,0.839708713941948,0.414599921413271,0.954670618015114,1.58167996790568,1.42323626988794,1.08005340821801,1.46361807210128,0.218362563746178,0.269728692769641,0.661227645802687,0.26175594198403,0.388844919875379,0,0,0,0.330916980914195,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0,0,0,0.579568782096571,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0.453142408984205,0,0.726511433089237,1.19707462020309,0.682934423016537,0.486213434136588,0,0.183843508450014,0.44449345560323,0.618105171716683,0.320919209591815,0.758091635291392,0.760437899670719,0.754505365544305,0.842773567228942,0.128050304809739,0.689225627467359,0.952587382566147,0.927074607558844,0.77163688185482,0,0.588795680537589,1.71434626192708,0.532427418478012,0.715308569841963,0.290692833264657,0.282328141245992,0.761531471025089,1.09756783723664,0.789209134313529,0.543216455383447,0,0.593175090620871,0.886540341380071,0,1.08455788830176,0.578719832943424,0.249810577937946,0,0.214871054048298,0.191288332068843,0.220591419119515,0.463735671240843 | ||
|short_description=p14@Pde4d | |short_description=p14@Pde4d | ||
}} | }} |
Latest revision as of 02:21, 27 September 2015
Short description: | p14@Pde4d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Pde4d_5end |
Coexpression cluster: | MCL_coexpression_mm9:57 |
Association with transcript: | -252bp_to_ENSMUST00000153234_5end |
EntrezGene: | Pde4d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.42e-13 | 6 |
gut absorptive cell | 2.42e-13 | 6 |
enterocyte | 2.42e-13 | 6 |
columnar/cuboidal epithelial cell | 2.58e-11 | 7 |
intestinal epithelial cell | 1.30e-08 | 9 |
epithelial cell of alimentary canal | 1.30e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
eye | 1.57e-16 | 9 |
camera-type eye | 1.57e-16 | 9 |
simple eye | 1.57e-16 | 9 |
immature eye | 1.57e-16 | 9 |
ocular region | 1.57e-16 | 9 |
visual system | 1.57e-16 | 9 |
face | 1.57e-16 | 9 |
optic cup | 1.57e-16 | 9 |
optic vesicle | 1.57e-16 | 9 |
eye primordium | 1.57e-16 | 9 |
subdivision of head | 3.23e-13 | 11 |
sense organ | 5.65e-12 | 12 |
sensory system | 5.65e-12 | 12 |
entire sense organ system | 5.65e-12 | 12 |
head | 6.34e-11 | 13 |
ectodermal placode | 6.34e-11 | 13 |
pancreas | 2.76e-09 | 12 |
epithelium of mucosa | 1.30e-08 | 9 |
gastrointestinal system epithelium | 1.30e-08 | 9 |
intestinal epithelium | 1.30e-08 | 9 |
simple columnar epithelium | 6.81e-07 | 11 |