FFCP PHASE1:Hg19::chr11:29024462..29024481,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:29024462..29024481,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_at_chr11:29024462..29024481,- | |description=CAGE_peak_at_chr11:29024462..29024481,- | ||
|id=chr11:29024462..29024481,- | |id=chr11:29024462..29024481,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.11e-16;2!UBERON:0006601;2.10e-12;82!UBERON:0006241;1.38e-11;3!UBERON:0003057;1.38e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.56e-107!57;UBERON:0005068!1.56e-107!57;UBERON:0006241!1.56e-107!57;UBERON:0007135!1.56e-107!57;UBERON:0002616!1.94e-87!59;UBERON:0001017!1.58e-79!82;UBERON:0002780!2.38e-77!41;UBERON:0001890!2.38e-77!41;UBERON:0006240!2.38e-77!41;UBERON:0000955!6.85e-77!69;UBERON:0006238!6.85e-77!69;UBERON:0005743!1.64e-75!86;UBERON:0003080!2.18e-75!42;UBERON:0001893!3.63e-69!34;UBERON:0002020!5.04e-69!34;UBERON:0003528!5.04e-69!34;UBERON:0003075!8.23e-69!86;UBERON:0007284!8.23e-69!86;UBERON:0000073!1.10e-67!94;UBERON:0001016!1.10e-67!94;UBERON:0002791!1.14e-65!33;UBERON:0002346!2.10e-65!90;UBERON:0001869!1.21e-61!32;UBERON:0003056!4.04e-50!61;UBERON:0007023!5.07e-50!115;UBERON:0002619!1.47e-42!22;UBERON:0000033!1.97e-42!123;UBERON:0000153!4.31e-40!129;UBERON:0007811!4.31e-40!129;UBERON:0000956!3.34e-37!25;UBERON:0000203!3.34e-37!25;UBERON:0002308!4.13e-37!9;UBERON:0000125!4.13e-37!9;UBERON:0001950!2.50e-35!20;UBERON:0004121!2.78e-34!169;UBERON:0000924!2.67e-33!173;UBERON:0006601!2.67e-33!173;UBERON:0000025!1.12e-32!194;UBERON:0003076!1.40e-31!15;UBERON:0003057!1.40e-31!15;UBERON:0002420!7.66e-30!9;UBERON:0007245!7.66e-30!9;UBERON:0010009!7.66e-30!9;UBERON:0010011!7.66e-30!9;UBERON:0000454!7.66e-30!9;UBERON:0009663!9.45e-30!7;UBERON:0004111!1.51e-24!241;UBERON:0004733!8.69e-21!12;UBERON:0002028!8.69e-21!12;UBERON:0007277!8.69e-21!12;UBERON:0000477!1.79e-20!286;UBERON:0004732!4.34e-19!13;UBERON:0002298!9.85e-19!8;UBERON:0000200!1.78e-17!6;UBERON:0000369!2.12e-17!4;UBERON:0002435!2.12e-17!4;UBERON:0000204!2.12e-17!4;UBERON:0010082!2.12e-17!4;UBERON:0000483!3.91e-17!309;UBERON:0000119!7.01e-17!312;UBERON:0002680!9.76e-16!9;UBERON:0001895!9.76e-16!9;UBERON:0010092!9.76e-16!9;UBERON:0000349!4.07e-14!5;UBERON:0002240!8.40e-14!3;UBERON:0002771!9.55e-14!3;UBERON:0005383!1.13e-13!3;UBERON:0005382!1.13e-13!3;UBERON:0006331!2.52e-13!3;UBERON:0001871!3.58e-13!7;UBERON:0002021!3.94e-13!5;UBERON:0000064!4.26e-13!219;UBERON:0000988!4.91e-13!3;UBERON:0000475!3.56e-12!365;UBERON:0001954!6.76e-10!2;UBERON:0003022!6.76e-10!2;UBERON:0002421!6.76e-10!2;UBERON:0002600!6.76e-10!2;UBERON:0001875!7.05e-10!2;UBERON:0006514!7.05e-10!2;UBERON:0001897!8.03e-10!2;UBERON:0001894!9.58e-10!7;UBERON:0006222!9.58e-10!7;UBERON:0001873!1.18e-09!2;UBERON:0010122!1.18e-09!2;UBERON:0002148!4.35e-09!2;UBERON:0009662!4.35e-09!2;UBERON:0005174!1.89e-08!5;UBERON:0001137!1.89e-08!5;UBERON:0001872!5.60e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.46e-44;34!UBERON:0002020;2.46e-44;34!UBERON:0002791;7.79e-44;32!UBERON:0001893;8.19e-44;34!UBERON:0002420;2.26e-41;9!UBERON:0007245;2.26e-41;9!UBERON:0010009;2.26e-41;9!UBERON:0010011;2.26e-41;9!UBERON:0000454;2.26e-41;9!UBERON:0000125;3.77e-41;9!UBERON:0002308;3.77e-41;9!UBERON:0000073;7.52e-41;53!UBERON:0002616;7.52e-41;53!UBERON:0002780;1.20e-39;41!UBERON:0001890;1.20e-39;41!UBERON:0009663;2.21e-39;7!UBERON:0001869;2.48e-37;32!UBERON:0002619;9.22e-26;22!UBERON:0005383;1.36e-23;3!UBERON:0005382;1.36e-23;3!UBERON:0000956;1.22e-22;25!UBERON:0000203;1.22e-22;25!UBERON:0001017;1.94e-22;75!UBERON:0000955;6.37e-22;68!UBERON:0002298;1.82e-20;6!UBERON:0001016;3.75e-19;83!UBERON:0000369;7.42e-18;4!UBERON:0002435;7.42e-18;4!UBERON:0000204;7.42e-18;4!UBERON:0001950;3.80e-17;20!UBERON:0001954;1.08e-16;2!UBERON:0003022;1.08e-16;2!UBERON:0002421;1.08e-16;2!UBERON:0002600;1.08e-16;2!UBERON:0001897;1.48e-16;2!UBERON:0010225;1.48e-16;2!UBERON:0001875;1.67e-16;2!UBERON:0006514;1.67e-16;2!UBERON:0002771;2.11e-16;2!UBERON:0001873;3.11e-16;2!UBERON:0004733;1.20e-15;12!UBERON:0002028;1.20e-15;12!UBERON:0000349;1.13e-14;5!UBERON:0004732;1.96e-14;13!UBERON:0000200;4.88e-12;6!UBERON:0002240;1.38e-11;3!UBERON:0005174;1.38e-11;3!UBERON:0001137;1.38e-11;3!UBERON:0001896;3.01e-11;3!UBERON:0005290;3.01e-11;3!UBERON:0007023;5.37e-11;114!UBERON:0000988;6.00e-11;3!UBERON:0001870;6.00e-11;3!UBERON:0001871;1.63e-10;6!UBERON:0002038;1.74e-09;1!UBERON:0009661;1.74e-09;1!UBERON:0002950;1.74e-09;1!UBERON:0001891;1.74e-09;1!UBERON:0001874;4.03e-09;1!UBERON:0002336;7.85e-09;1!UBERON:0011215;7.85e-09;1!UBERON:0001018;7.85e-09;1!UBERON:0002473;7.85e-09;1!UBERON:0005340;7.85e-09;1!UBERON:0003544;7.85e-09;1!UBERON:0005970;7.85e-09;1!UBERON:0002316;7.85e-09;1!UBERON:0001020;7.85e-09;1!UBERON:0002437;7.85e-09;1!UBERON:0011216;8.39e-09;132!UBERON:0002784;9.93e-09;4!UBERON:0002680;4.77e-08;9!UBERON:0001895;4.77e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.24e-80,56;UBERON:0005068,3.24e-80,56;UBERON:0006241,3.24e-80,56;UBERON:0007135,3.24e-80,56;UBERON:0000073,4.00e-71,53;UBERON:0002616,4.00e-71,53;UBERON:0002780,4.46e-56,41;UBERON:0001890,4.46e-56,41;UBERON:0003080,4.46e-56,41;UBERON:0006240,4.46e-56,41;UBERON:0000955,4.82e-54,68;UBERON:0006238,4.82e-54,68;UBERON:0001017,6.16e-54,81;UBERON:0003075,6.16e-54,82;UBERON:0007284,6.16e-54,82;UBERON:0001893,2.76e-53,34;UBERON:0003528,2.96e-53,34;UBERON:0002020,2.96e-53,34;UBERON:0002346,2.76e-51,86;UBERON:0002791,9.14e-50,32;UBERON:0001016,2.70e-48,89;UBERON:0001869,4.69e-43,32;UBERON:0010371,7.54e-42,104;UBERON:0002420,2.13e-41,9;UBERON:0007245,2.13e-41,9;UBERON:0010009,2.13e-41,9;UBERON:0010011,2.13e-41,9;UBERON:0000454,2.13e-41,9;UBERON:0000125,3.25e-41,9;UBERON:0002308,3.25e-41,9;UBERON:0009663,1.76e-39,7;UBERON:0003056,5.71e-37,61;UBERON:0007023,5.15e-35,114;UBERON:0010314,3.10e-32,132;UBERON:0002619,9.52e-26,22;UBERON:0003076,3.24e-24,15;UBERON:0003057,3.24e-24,15;UBERON:0004121,1.01e-23,171;UBERON:0000924,1.01e-23,171;UBERON:0006601,1.01e-23,171;UBERON:0005383,1.47e-23,3;UBERON:0005382,1.47e-23,3;UBERON:0000025,4.60e-23,192;UBERON:0000956,1.25e-22,25;UBERON:0000203,1.25e-22,25;UBERON:0002298,1.96e-20,6;UBERON:0000369,7.87e-18,4;UBERON:0002435,7.87e-18,4;UBERON:0000204,7.87e-18,4;UBERON:0010082,7.87e-18,4;UBERON:0004111,1.13e-17,240;UBERON:0011216,2.97e-17,223;UBERON:0001950,3.90e-17,20;UBERON:0001954,1.08e-16,2;UBERON:0003022,1.08e-16,2;UBERON:0002421,1.08e-16,2;UBERON:0002600,1.08e-16,2;UBERON:0001875,1.17e-16,2;UBERON:0006514,1.17e-16,2;UBERON:0002771,1.48e-16,2;UBERON:0001897,1.48e-16,2;UBERON:0010225,1.48e-16,2;UBERON:0001873,2.99e-16,2;UBERON:0010122,2.99e-16,2;UBERON:0004733,1.38e-15,12;UBERON:0002028,1.38e-15,12;UBERON:0007277,1.38e-15,12;UBERON:0000349,1.27e-14,5;UBERON:0004732,2.23e-14,13;UBERON:0000483,5.39e-13,306;UBERON:0000119,7.90e-13,309;UBERON:0000200,3.81e-12,6;UBERON:0002240,1.27e-11,3;UBERON:0005174,1.27e-11,3;UBERON:0001137,1.27e-11,3;UBERON:0001896,3.60e-11,3;UBERON:0005290,3.60e-11,3;UBERON:0010096,3.60e-11,3;UBERON:0000988,5.43e-11,3;UBERON:0001870,6.65e-11,3;UBERON:0001871,1.53e-10,6;UBERON:0002038,1.74e-09,1;UBERON:0009661,1.74e-09,1;UBERON:0002950,1.74e-09,1;UBERON:0001891,1.74e-09,1;UBERON:0009616,1.74e-09,1;UBERON:0010286,1.74e-09,1;UBERON:0001874,4.54e-09,1;UBERON:0002336,7.27e-09,1;UBERON:0011215,7.27e-09,1;UBERON:0001018,7.27e-09,1;UBERON:0002473,7.27e-09,1;UBERON:0005340,7.27e-09,1;UBERON:0003544,7.27e-09,1;UBERON:0005970,7.27e-09,1;UBERON:0002316,7.27e-09,1;UBERON:0001020,7.27e-09,1;UBERON:0002437,7.27e-09,1;UBERON:0002784,9.94e-09,4;UBERON:0002680,4.89e-08,9;UBERON:0001895,4.89e-08,9;UBERON:0010092,4.89e-08,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0,0,4.0507097394088,0,0.44905874525234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11004124615769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.927680981618513,0,0,0,0,0,0,0,0,0,0,2.65722415744152,1.5677537021303,1.52581736317083,0.442317039724898,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7524294574976,0,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,1.51945910294109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,4.24406674565178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,3.81369537112412,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,1.58679122091228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83039397352945,1.752673029891,0,3.88251680378983,1.4903136705932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04168559533808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.834979926253974,0,3.03304332208587,0.82046545696302,0.252071696221718,0.207471757392654,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540300676947157,0,2.48024155801421,0.443910671357348,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,1.76721305739762,0.460409414939944,0,0,0,2.19961825882403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55201007249429,8.91139200981258,0.8453114551668,0,0,0,0,0,0,0,0,0,6.59362082496676,0,0.407948941145488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,5.37851578481855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0,0,4.0507097394088,0,0.44905874525234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11004124615769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.927680981618513,0,0,0,0,0,0,0,0,0,0,2.65722415744152,1.5677537021303,1.52581736317083,0.442317039724898,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7524294574976,0,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,1.51945910294109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,4.24406674565178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,3.81369537112412,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,1.58679122091228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83039397352945,1.752673029891,0,3.88251680378983,1.4903136705932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04168559533808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.834979926253974,0,3.03304332208587,0.82046545696302,0.252071696221718,0.207471757392654,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540300676947157,0,2.48024155801421,0.443910671357348,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,1.76721305739762,0.460409414939944,0,0,0,2.19961825882403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55201007249429,8.91139200981258,0.8453114551668,0,0,0,0,0,0,0,0,0,6.59362082496676,0,0.407948941145488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,5.37851578481855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:29024462..29024481,- | |short_description=p@chr11:29024462..29024481,- | ||
}} | }} |
Latest revision as of 21:21, 23 July 2015
Short description: | p@chr11:29024462..29024481, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:29024462..29024481, - |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data