FFCP PHASE1:Mm9::chr14:103912521..103912541,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=64929 | |EntrezGene=64929 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9EQG3,E9PYR5,Q14DU0,Q05CI7,Q14DQ7 | |UniProt=Q9EQG3,E9PYR5,Q14DU0,Q05CI7,Q14DQ7 | ||
|association_with_transcript=-16bp_to_ENSMUST00000095576,ENSMUST00000110760,NM_022886,uc007uwq.1,uc007uwr.1,uc011zpl.1_5end | |association_with_transcript=-16bp_to_ENSMUST00000095576,ENSMUST00000110760,NM_022886,uc007uwq.1,uc007uwr.1,uc011zpl.1_5end | ||
|cluster_id=chr14:103912521..103912541,+ | |||
|description=CAGE_peak_3_at_Scel_5end | |description=CAGE_peak_3_at_Scel_5end | ||
|id=chr14:103912521..103912541,+ | |id=chr14:103912521..103912541,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000680,4.41e-10,6;CL:0000187,4.41e-10,6;CL:0000056,4.41e-10,6;CL:0002494,7.05e-09,3;CL:0000737,7.05e-09,3;CL:0000746,7.05e-09,3;CL:0000513,7.05e-09,3;CL:0000222,1.39e-08,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!5.06e-08!17;UBERON:0005181!5.06e-08!17;UBERON:0002224!5.06e-08!17;UBERON:0000915!5.06e-08!17;UBERON:0008947!5.06e-08!17;UBERON:0003258!5.06e-08!17;UBERON:0002048!5.36e-07!14;UBERON:0000117!5.36e-07!14;UBERON:0000171!5.36e-07!14;UBERON:0000170!5.36e-07!14;UBERON:0005597!5.36e-07!14;UBERON:0000118!5.36e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.37e-12,14;UBERON:0000117,1.37e-12,14;UBERON:0000171,1.37e-12,14;UBERON:0000170,1.37e-12,14;UBERON:0005597,1.37e-12,14;UBERON:0000118,1.37e-12,14;UBERON:0000014,1.86e-12,5;UBERON:0001003,1.86e-12,5;UBERON:0002097,1.86e-12,5;UBERON:0002199,1.86e-12,5;UBERON:0007029,1.86e-12,5;UBERON:0007376,1.86e-12,5;UBERON:0002416,1.86e-12,5;UBERON:0007383,1.86e-12,5;UBERON:0005178,3.23e-12,17;UBERON:0005181,3.23e-12,17;UBERON:0002224,3.23e-12,17;UBERON:0000915,3.23e-12,17;UBERON:0008947,3.23e-12,17;UBERON:0003258,3.23e-12,17;UBERON:0005153,4.62e-10,17;UBERON:0003102,3.70e-09,22;UBERON:0005157,2.70e-08,20 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,1.44573593256819,0.695036658406197,2.35079810225042,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,1.00717454380462,1.72340783073175,0,0,0,0.219686182734472,0,0,0,0,0,0,15.6928255981928,16.3324060765091,7.73508138416164,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.510749352340751,0.614426133024974,0,0,0,0.279182999001381,0,0.30559649555362,0,0.284743361598206,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.432982082022428,0.253359865475099,1.01104889002957,0.79928715803342,0,0,0,0.304465478312141,0.230615497256059,0,0.23517741427141,0,2.47194967734374,0.433798070759735,0.884610551949874,0,0,0,1.86391761218122,0.292780797011547,0,0,0,0,0,0.599162557619291,0.915001205637253,0,0.173824320192276,0.767146371990992,0.83115217823824,0.324482526135515,0.101839363850316,0,0,0.631325567659422,0.130120442962704,0.229902104433473,0.900310649026746,0.60281927134286,0.816437989815934,0.2562274405697,0.374806898238915,2.32833033665114,0,0,0.175951124163949,0.219195732427575,1.66828349535359,2.089512999133,3.49829631893504,0,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0,0,0,0,0.536546802799238,0,0,0,0.0810688095458557,0.146199987425332,0.439100230582101,0.268412837520744,0.210289948564127,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0.795825888164603,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.316182685621286,0.590440591918409,0.470996183524124,0.493588655687202,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0.744281895337007,0,0,0,0,16.812540305161,0.189491411770485,0.162964976442026,0.169745085775188,0,0.670025029767263,1.90434912708811,1.17080188714679,3.78324345854858,3.98636441367795,3.6674596791222,6.71839590334526,3.62638461918381,6.65385669474953,0,0,0,0,0.80275294993896,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0.329098041204242,0,0.23467170806371,9.32061111800809,0,12.5313552235525,3.39075296061402,2.95533332147964,5.96861720015682,5.0883678920969,0,1.48340241608408,0,0.206386867963223,0,0,0,0,0,0,0,1.90934123603023,0,0.203319467126849,0.972048067396211,3.97267762427491,3.49380101993884,4.04593039154462,2.47960367176008,4.18809507174447,0.129614973291793,0,0,0,0,0,0,0,0.234714477291508,0,0.104859344425711,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0.201932899896295,0,0,0,0,0.233753804363138,6.12172035761071,0,0,0,0.579568782096571,0.187682475451182,0,4.50173596066038,0,0,0.920650473014354,0.572895513439397,0.343706364687375,0,0,0,1.35096360967266,0,0.51776031175182,0.103787347584177,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0,0.565879024158229,0.0936415074698824,0.448176066834085,0.17230640686684,0,0.231768651889711,0.192909220463705,0,0.441596760403192,0.342869252385415,0.532427418478012,0,0.145346416632329,0.564656282491984,0.592302255241736,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0.394017929502254,0,0.929621047115796,0.964533054905707,0.749431733813838,0.701794825336225,0.859484216193193,0.765153328275374,0,0.231867835620421 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,1.44573593256819,0.695036658406197,2.35079810225042,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,1.00717454380462,1.72340783073175,0,0,0,0.219686182734472,0,0,0,0,0,0,15.6928255981928,16.3324060765091,7.73508138416164,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.510749352340751,0.614426133024974,0,0,0,0.279182999001381,0,0.30559649555362,0,0.284743361598206,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.432982082022428,0.253359865475099,1.01104889002957,0.79928715803342,0,0,0,0.304465478312141,0.230615497256059,0,0.23517741427141,0,2.47194967734374,0.433798070759735,0.884610551949874,0,0,0,1.86391761218122,0.292780797011547,0,0,0,0,0,0.599162557619291,0.915001205637253,0,0.173824320192276,0.767146371990992,0.83115217823824,0.324482526135515,0.101839363850316,0,0,0.631325567659422,0.130120442962704,0.229902104433473,0.900310649026746,0.60281927134286,0.816437989815934,0.2562274405697,0.374806898238915,2.32833033665114,0,0,0.175951124163949,0.219195732427575,1.66828349535359,2.089512999133,3.49829631893504,0,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0,0,0,0,0.536546802799238,0,0,0,0.0810688095458557,0.146199987425332,0.439100230582101,0.268412837520744,0.210289948564127,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0.795825888164603,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.316182685621286,0.590440591918409,0.470996183524124,0.493588655687202,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0.744281895337007,0,0,0,0,16.812540305161,0.189491411770485,0.162964976442026,0.169745085775188,0,0.670025029767263,1.90434912708811,1.17080188714679,3.78324345854858,3.98636441367795,3.6674596791222,6.71839590334526,3.62638461918381,6.65385669474953,0,0,0,0,0.80275294993896,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0.329098041204242,0,0.23467170806371,9.32061111800809,0,12.5313552235525,3.39075296061402,2.95533332147964,5.96861720015682,5.0883678920969,0,1.48340241608408,0,0.206386867963223,0,0,0,0,0,0,0,1.90934123603023,0,0.203319467126849,0.972048067396211,3.97267762427491,3.49380101993884,4.04593039154462,2.47960367176008,4.18809507174447,0.129614973291793,0,0,0,0,0,0,0,0.234714477291508,0,0.104859344425711,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0.201932899896295,0,0,0,0,0.233753804363138,6.12172035761071,0,0,0,0.579568782096571,0.187682475451182,0,4.50173596066038,0,0,0.920650473014354,0.572895513439397,0.343706364687375,0,0,0,1.35096360967266,0,0.51776031175182,0.103787347584177,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0,0.565879024158229,0.0936415074698824,0.448176066834085,0.17230640686684,0,0.231768651889711,0.192909220463705,0,0.441596760403192,0.342869252385415,0.532427418478012,0,0.145346416632329,0.564656282491984,0.592302255241736,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0.394017929502254,0,0.929621047115796,0.964533054905707,0.749431733813838,0.701794825336225,0.859484216193193,0.765153328275374,0,0.231867835620421 | ||
|short_description=p3@Scel | |short_description=p3@Scel | ||
}} | }} |
Latest revision as of 15:34, 25 September 2015
Short description: | p3@Scel |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Scel_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_ENSMUST00000095576, ENSMUST00000110760, NM_022886, uc007uwq.1, uc007uwr.1, uc011zpl.1_5end |
EntrezGene: | Scel |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 4.41e-10 | 6 |
muscle cell | 4.41e-10 | 6 |
myoblast | 4.41e-10 | 6 |
cardiocyte | 7.05e-09 | 3 |
striated muscle cell | 7.05e-09 | 3 |
cardiac muscle cell | 7.05e-09 | 3 |
cardiac muscle myoblast | 7.05e-09 | 3 |
mesodermal cell | 1.39e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
lung | 1.37e-12 | 14 |
respiratory tube | 1.37e-12 | 14 |
respiration organ | 1.37e-12 | 14 |
pair of lungs | 1.37e-12 | 14 |
lung primordium | 1.37e-12 | 14 |
lung bud | 1.37e-12 | 14 |
zone of skin | 1.86e-12 | 5 |
skin epidermis | 1.86e-12 | 5 |
skin of body | 1.86e-12 | 5 |
integument | 1.86e-12 | 5 |
surface | 1.86e-12 | 5 |
outer epithelium | 1.86e-12 | 5 |
integumental system | 1.86e-12 | 5 |
enveloping layer of ectoderm | 1.86e-12 | 5 |
thoracic cavity element | 3.23e-12 | 17 |
thoracic segment organ | 3.23e-12 | 17 |
thoracic cavity | 3.23e-12 | 17 |
thoracic segment of trunk | 3.23e-12 | 17 |
respiratory primordium | 3.23e-12 | 17 |
endoderm of foregut | 3.23e-12 | 17 |
epithelial bud | 4.62e-10 | 17 |
surface structure | 3.70e-09 | 22 |
epithelial fold | 2.70e-08 | 20 |