FFCP PHASE1:Mm9::chr18:47492965..47493027,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20358 | |EntrezGene=20358 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=D3YZJ8,O35464 | |UniProt=D3YZJ8,O35464 | ||
|association_with_transcript=0bp_to_ENSMUST00000126684,ENSMUST00000156422_5end | |association_with_transcript=0bp_to_ENSMUST00000126684,ENSMUST00000156422_5end | ||
|cluster_id=chr18:47492965..47493027,- | |||
|description=CAGE_peak_3_at_Sema6a_5end | |description=CAGE_peak_3_at_Sema6a_5end | ||
|id=chr18:47492965..47493027,- | |id=chr18:47492965..47493027,- | ||
|ontology_enrichment_celltype=CL:0002563!3.51e-07!9;CL:0002251!3.51e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.21e-08,6;CL:0000677,3.21e-08,6;CL:0000584,3.21e-08,6;CL:0002563,8.13e-08,9;CL:0002251,8.13e-08,9;CL:0000075,7.34e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.65e-17!43;UBERON:0005409!8.31e-16!59;UBERON:0000344!4.91e-12!15;UBERON:0001242!1.73e-10!13;UBERON:0000060!1.73e-10!13;UBERON:0001262!1.73e-10!13;UBERON:0004786!1.73e-10!13;UBERON:0004923!2.58e-07!24;UBERON:0003350!3.51e-07!9;UBERON:0004808!3.51e-07!9;UBERON:0001277!3.51e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.48e-29,31;UBERON:0005409,1.38e-22,47;UBERON:0000344,2.10e-14,15;UBERON:0001242,2.75e-12,13;UBERON:0001262,2.75e-12,13;UBERON:0004786,2.75e-12,13;UBERON:0004923,1.03e-08,24;UBERON:0003350,8.13e-08,9;UBERON:0004808,8.13e-08,9;UBERON:0001277,8.13e-08,9 | |||
|phase1_expression=0,79.217417534135,68.2498859084304,137.923680355914,142.254387304763,5.20425742926858,7.00837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.9178253417077,33.4937550358068,53.4035726626969,39.6301036466349,30.3814438087104,67.6483373264691,79.6415210041381,14.6342137032501,0,0,0,1.1554064790051,1.99481574430191,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0,0.279972843250725,1.43752564364972,0,0,0,0,0,0,1.41621522601718,2.11596391708813,2.53532561402472,0,0,0,0,0,0,0,0.414758449233911,0,0.210324961351382,0,0,0.734944795289724,0.287536413054709,0,0,0,0,0.791317726381163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.7919993435573,0,0,0,0.281686839553361,0,0,0,0,0,0,15.300639882354,0,0,0,0,0.461230994512117,0,0,0.125666591329675,12.8541383221874,0,0,0,0,0,16.775258509631,0,0,72.0388895688228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30140963567143,0.136072998302656,0.384341160854549,0.562210347358373,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0.102904612379284,302.663605213159,101.020116465474,0.213288250535234,0,7.60318021800351,43.7653248432653,54.0378646543035,82.3676961067381,81.618998585656,99.8075665627506,98.0207314321051,96.6928454119993,114.833847313162,106.959509629852,75.8644555060177,72.8857060110984,0.189667900953082,0.228497025219458,1.1270773567308,1.01825663922657,0.775809948670503,0.911765658574141,0.126473074248515,0,0,0,0,0.333690211432188,0.982794975566015,1.79889689907883,2.63718157805054,2.17059443777175,2.29163266603278,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0.307435147943927,23.7754029714763,0,0,0.316036757935816,0,0,0,0.720244376125241,0.776152102696527,0.214337035031592,0,0,0,0,0,0.847328283455281,0,0,0,0.0603129249281559,0,0,99.1034844541493,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,4.42821897369385,0.836353184057875,5.67742665740062,1.34864346384821,1.65306911450672,0.26175594198403,10.4988128366352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798049746802062,0.512200817262403,0.486213434136588,0.628839487883947,0.919217542250071,4.00044110042907,3.91466608753899,5.77654577265267,5.55933865880354,2.78827229879264,4.33840585187975,2.62196220915671,3.45735822986294,3.50356360629241,3.33405583898152,3.36064545240081,3.8581844092741,6.1812885120496,4.12156976376312,4.80016953339582,3.01708870470874,3.57654284920981,4.50573891560218,4.51725025993587,3.21535509988371,2.56099162021882,2.10455769150274,4.88894809845102,2.24456908663095,4.03359061622192,2.65962102414021,4.09231043169689,3.09873682371932,2.70069255373598,0,4.21076895201735,6.87587372954555,0,0,0 | |phase1_expression=0,79.217417534135,68.2498859084304,137.923680355914,142.254387304763,5.20425742926858,7.00837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.9178253417077,33.4937550358068,53.4035726626969,39.6301036466349,30.3814438087104,67.6483373264691,79.6415210041381,14.6342137032501,0,0,0,1.1554064790051,1.99481574430191,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0,0.279972843250725,1.43752564364972,0,0,0,0,0,0,1.41621522601718,2.11596391708813,2.53532561402472,0,0,0,0,0,0,0,0.414758449233911,0,0.210324961351382,0,0,0.734944795289724,0.287536413054709,0,0,0,0,0.791317726381163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.7919993435573,0,0,0,0.281686839553361,0,0,0,0,0,0,15.300639882354,0,0,0,0,0.461230994512117,0,0,0.125666591329675,12.8541383221874,0,0,0,0,0,16.775258509631,0,0,72.0388895688228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30140963567143,0.136072998302656,0.384341160854549,0.562210347358373,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0.102904612379284,302.663605213159,101.020116465474,0.213288250535234,0,7.60318021800351,43.7653248432653,54.0378646543035,82.3676961067381,81.618998585656,99.8075665627506,98.0207314321051,96.6928454119993,114.833847313162,106.959509629852,75.8644555060177,72.8857060110984,0.189667900953082,0.228497025219458,1.1270773567308,1.01825663922657,0.775809948670503,0.911765658574141,0.126473074248515,0,0,0,0,0.333690211432188,0.982794975566015,1.79889689907883,2.63718157805054,2.17059443777175,2.29163266603278,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0.307435147943927,23.7754029714763,0,0,0.316036757935816,0,0,0,0.720244376125241,0.776152102696527,0.214337035031592,0,0,0,0,0,0.847328283455281,0,0,0,0.0603129249281559,0,0,99.1034844541493,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,4.42821897369385,0.836353184057875,5.67742665740062,1.34864346384821,1.65306911450672,0.26175594198403,10.4988128366352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798049746802062,0.512200817262403,0.486213434136588,0.628839487883947,0.919217542250071,4.00044110042907,3.91466608753899,5.77654577265267,5.55933865880354,2.78827229879264,4.33840585187975,2.62196220915671,3.45735822986294,3.50356360629241,3.33405583898152,3.36064545240081,3.8581844092741,6.1812885120496,4.12156976376312,4.80016953339582,3.01708870470874,3.57654284920981,4.50573891560218,4.51725025993587,3.21535509988371,2.56099162021882,2.10455769150274,4.88894809845102,2.24456908663095,4.03359061622192,2.65962102414021,4.09231043169689,3.09873682371932,2.70069255373598,0,4.21076895201735,6.87587372954555,0,0,0 | ||
|short_description=p3@Sema6a | |short_description=p3@Sema6a | ||
}} | }} |
Latest revision as of 08:19, 27 September 2015
Short description: | p3@Sema6a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sema6a_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000126684, ENSMUST00000156422_5end |
EntrezGene: | Sema6a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.21e-08 | 6 |
gut absorptive cell | 3.21e-08 | 6 |
enterocyte | 3.21e-08 | 6 |
intestinal epithelial cell | 8.13e-08 | 9 |
epithelial cell of alimentary canal | 8.13e-08 | 9 |
columnar/cuboidal epithelial cell | 7.34e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.48e-29 | 31 |
gastrointestinal system | 1.38e-22 | 47 |
mucosa | 2.10e-14 | 15 |
intestinal mucosa | 2.75e-12 | 13 |
wall of intestine | 2.75e-12 | 13 |
gastrointestinal system mucosa | 2.75e-12 | 13 |
organ component layer | 1.03e-08 | 24 |
epithelium of mucosa | 8.13e-08 | 9 |
gastrointestinal system epithelium | 8.13e-08 | 9 |
intestinal epithelium | 8.13e-08 | 9 |